RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 NUCKS1Q9H1E3 243 aaKnown RBP5.47□□□□□ -1.53
SNHG1-202ENST00000535689 DNMT3LQ9UJW3 386 aa5.47□□□□□ -1.53
SNHG1-202ENST00000535689 PCDHGC4Q9Y5F7 938 aa5.47□□□□□ -1.53
SNHG1-202ENST00000535689 CADPSQ9ULU8 1353 aa5.46□□□□□ -1.54
SNHG1-202ENST00000535689 SMARCA4P51532 1647 aa5.46□□□□□ -1.54
SNHG1-202ENST00000535689 SLC35F4A4IF30 521 aa5.46□□□□□ -1.54
SNHG1-202ENST00000535689 MPSTP25325 297 aa5.46□□□□□ -1.54
SNHG1-202ENST00000535689 TXLNAP40222 546 aa5.46□□□□□ -1.54
SNHG1-202ENST00000535689 ATP2B2Q01814 1243 aa5.46□□□□□ -1.54
SNHG1-202ENST00000535689 PTSQ03393 145 aa5.46□□□□□ -1.54
SNHG1-202ENST00000535689 TRIM22Q8IYM9 498 aa5.46□□□□□ -1.54
SNHG1-202ENST00000535689 ZNF295-AS1Q8N0V1 137 aa5.46□□□□□ -1.54
SNHG1-202ENST00000535689 ASB16Q96NS5 453 aa5.46□□□□□ -1.54
SNHG1-202ENST00000535689 CFHR5Q9BXR6 569 aa5.46□□□□□ -1.54
SNHG1-202ENST00000535689 MRC2Q9UBG0 1479 aa5.45□□□□□ -1.54
SNHG1-202ENST00000535689 TERTO14746 1132 aaKnown RBP5.45□□□□□ -1.54
SNHG1-202ENST00000535689 ATXN7O15265 892 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-202ENST00000535689 WFS1O76024 890 aa5.45□□□□□ -1.54
SNHG1-202ENST00000535689 FAM157BP0CG42 384 aa5.45□□□□□ -1.54
SNHG1-202ENST00000535689 IDH3AP50213 366 aa5.45□□□□□ -1.54
SNHG1-202ENST00000535689 PDE12Q6L8Q7 609 aaKnown RBP5.45□□□□□ -1.54
SNHG1-202ENST00000535689 LRRC69Q6ZNQ3 347 aa5.45□□□□□ -1.54
SNHG1-202ENST00000535689 SV2AQ7L0J3 742 aa5.45□□□□□ -1.54
SNHG1-202ENST00000535689 BTLAQ7Z6A9 289 aa5.45□□□□□ -1.54
SNHG1-202ENST00000535689 RGL4Q8IZJ4 473 aa5.45□□□□□ -1.54
SNHG1-202ENST00000535689 PNMA5Q96PV4 448 aa5.45□□□□□ -1.54
SNHG1-202ENST00000535689 USP3Q9Y6I4 520 aa5.45□□□□□ -1.54
SNHG1-202ENST00000535689 PLCB3Q01970 1234 aa5.44□□□□□ -1.54
SNHG1-202ENST00000535689 CYB5RLQ6IPT4 315 aa5.44□□□□□ -1.54
SNHG1-202ENST00000535689 CCDC155Q8N6L0 562 aa5.44□□□□□ -1.54
SNHG1-202ENST00000535689 FRMD6Q96NE9 622 aa5.44□□□□□ -1.54
SNHG1-202ENST00000535689 SAP130Q9H0E3 1048 aa5.44□□□□□ -1.54
SNHG1-202ENST00000535689 GPAMQ9HCL2 828 aa5.44□□□□□ -1.54
SNHG1-202ENST00000535689 ANO2Q9NQ90 1003 aa5.44□□□□□ -1.54
SNHG1-202ENST00000535689 KLK14Q9P0G3 267 aa5.44□□□□□ -1.54
SNHG1-202ENST00000535689 MARK1Q9P0L2 795 aa5.44□□□□□ -1.54
SNHG1-202ENST00000535689 LRFN2Q9ULH4 789 aa5.44□□□□□ -1.54
SNHG1-202ENST00000535689 ATXN7L1Q9ULK2 861 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-202ENST00000535689 KCNH4Q9UQ05 1017 aa5.44□□□□□ -1.54
SNHG1-202ENST00000535689 PEG3Q9GZU2 1588 aa5.43□□□□□ -1.54
SNHG1-202ENST00000535689 ATP4AP20648 1035 aa5.43□□□□□ -1.54
SNHG1-202ENST00000535689 ITGA6P23229 1130 aa5.43□□□□□ -1.54
SNHG1-202ENST00000535689 KCNQ4P56696 695 aa5.43□□□□□ -1.54
SNHG1-202ENST00000535689 DNM1Q05193 864 aaKnown RBP5.43□□□□□ -1.54
SNHG1-202ENST00000535689 XKR5Q6UX68 686 aa5.43□□□□□ -1.54
SNHG1-202ENST00000535689 DNAJC25Q9H1X3 360 aa5.43□□□□□ -1.54
SNHG1-202ENST00000535689 RUBCNLQ9H714 662 aa5.43□□□□□ -1.54
SNHG1-202ENST00000535689 BRD7Q9NPI1 651 aa5.43□□□□□ -1.54
SNHG1-202ENST00000535689 PPP4R2Q9NY27 417 aa5.43□□□□□ -1.54
SNHG1-202ENST00000535689 NXF1Q9UBU9 619 aaKnown RBP5.43□□□□□ -1.54
SNHG1-202ENST00000535689 RIMBP3CA6NJZ7 1639 aa5.43□□□□□ -1.54
SNHG1-202ENST00000535689 RIMBP3BA6NNM3 1639 aa5.43□□□□□ -1.54
SNHG1-202ENST00000535689 RIMBP3Q9UFD9 1639 aa5.43□□□□□ -1.54
SNHG1-202ENST00000535689 ERBB4Q15303 1308 aa5.43□□□□□ -1.54
SNHG1-202ENST00000535689 WDR62O43379 1518 aa5.43□□□□□ -1.54
SNHG1-202ENST00000535689 TNFRSF10BO14763 440 aa5.42□□□□□ -1.54
SNHG1-202ENST00000535689 ARHGAP4P98171 946 aa5.42□□□□□ -1.54
SNHG1-202ENST00000535689 C8orf34Q49A92 452 aa5.42□□□□□ -1.54
SNHG1-202ENST00000535689 EAPPQ56P03 285 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-202ENST00000535689 FAM182BQ5T319 152 aa5.42□□□□□ -1.54
SNHG1-202ENST00000535689 TTC39BQ5VTQ0 682 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-202ENST00000535689 CMTR1Q8N1G2 835 aaKnown RBP5.42□□□□□ -1.54
SNHG1-202ENST00000535689 EDEM1Q92611 657 aa5.42□□□□□ -1.54
SNHG1-202ENST00000535689 ALKBH8Q96BT7 664 aaKnown RBP5.42□□□□□ -1.54
SNHG1-202ENST00000535689 ZCCHC2Q9C0B9 1178 aaKnown RBP5.42□□□□□ -1.54
SNHG1-202ENST00000535689 RBSNQ9H1K0 784 aa5.42□□□□□ -1.54
SNHG1-202ENST00000535689 AVENQ9NQS1 362 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-202ENST00000535689 UBAP1LF5GYI3 381 aa5.41□□□□□ -1.54
SNHG1-202ENST00000535689 KHNYNO15037 678 aaKnown RBP5.41□□□□□ -1.54
SNHG1-202ENST00000535689 EGFRP00533 1210 aa5.41□□□□□ -1.54
SNHG1-202ENST00000535689 INPP5BP32019 993 aa5.41□□□□□ -1.54
SNHG1-202ENST00000535689 CCINQ13939 588 aa5.41□□□□□ -1.54
SNHG1-202ENST00000535689 SH3PXD2AQ5TCZ1 1133 aa5.41□□□□□ -1.54
SNHG1-202ENST00000535689 ALG1LQ6GMV1 187 aa5.41□□□□□ -1.54
SNHG1-202ENST00000535689 ZNF438Q7Z4V0 828 aa5.41□□□□□ -1.54
SNHG1-202ENST00000535689 ETFBKMTQ8IXQ9 262 aa5.41□□□□□ -1.54
SNHG1-202ENST00000535689 GPR152Q8TDT2 470 aa5.41□□□□□ -1.54
SNHG1-202ENST00000535689 NANOS1Q8WY41 292 aaKnown RBP5.41□□□□□ -1.54
SNHG1-202ENST00000535689 NUDT16Q96DE0 195 aaKnown RBP5.41□□□□□ -1.54
SNHG1-202ENST00000535689 PRR12Q9ULL5 1215 aa5.41□□□□□ -1.54
SNHG1-202ENST00000535689 RTCBQ9Y3I0 505 aaKnown RBP5.41□□□□□ -1.54
SNHG1-202ENST00000535689 CEP164Q9UPV0 1460 aa5.4□□□□□ -1.54
SNHG1-202ENST00000535689 CDC14CA4D256 554 aa5.4□□□□□ -1.54
SNHG1-202ENST00000535689 ANKRD33BA6NCL7 494 aa5.4□□□□□ -1.54
SNHG1-202ENST00000535689 FAM177BA6PVY3 158 aa5.4□□□□□ -1.54
SNHG1-202ENST00000535689 PHF20L1A8MW92 1017 aa5.4□□□□□ -1.54
SNHG1-202ENST00000535689 GIPC1O14908 333 aa5.4□□□□□ -1.54
SNHG1-202ENST00000535689 PDGFAP04085 211 aa5.4□□□□□ -1.54
SNHG1-202ENST00000535689 RANGAP1P46060 587 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-202ENST00000535689 MAP2K3P46734 347 aa5.4□□□□□ -1.54
SNHG1-202ENST00000535689 TYRO3Q06418 890 aa5.4□□□□□ -1.54
SNHG1-202ENST00000535689 CAPN12Q6ZSI9 719 aa5.4□□□□□ -1.54
SNHG1-202ENST00000535689 NLRP13Q86W25 1043 aa5.4□□□□□ -1.54
SNHG1-202ENST00000535689 SNX29Q8TEQ0 813 aa5.4□□□□□ -1.54
SNHG1-202ENST00000535689 FBF1Q8TES7 1133 aa5.4□□□□□ -1.54
SNHG1-202ENST00000535689 C7orf43Q8WVR3 580 aa5.4□□□□□ -1.54
SNHG1-202ENST00000535689 SPACA7Q96KW9 195 aa5.4□□□□□ -1.54
SNHG1-202ENST00000535689 POLIQ9UNA4 740 aa5.4□□□□□ -1.54
SNHG1-202ENST00000535689 H3BM21 787 aa5.39□□□□□ -1.55
SNHG1-202ENST00000535689 FZD6O60353 706 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms