RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 BRD2P25440 801 aaKnown RBP9.87□□□□□ -0.83
PRKDC-205ENST00000535375 MARSP56192 900 aaKnown RBP9.87□□□□□ -0.83
PRKDC-205ENST00000535375 KCNQ4P56696 695 aa9.87□□□□□ -0.83
PRKDC-205ENST00000535375 SPEM2Q0P670 501 aa9.87□□□□□ -0.83
PRKDC-205ENST00000535375 KCNMA1Q12791 1236 aa9.87□□□□□ -0.83
PRKDC-205ENST00000535375 ZNF468Q5VIY5 522 aaPredicted RBP9.87□□□□□ -0.83
PRKDC-205ENST00000535375 CAPN12Q6ZSI9 719 aa9.87□□□□□ -0.83
PRKDC-205ENST00000535375 SAP130Q9H0E3 1048 aa9.87□□□□□ -0.83
PRKDC-205ENST00000535375 AVENQ9NQS1 362 aaPredicted RBP9.87□□□□□ -0.83
PRKDC-205ENST00000535375 DMGDHQ9UI17 866 aaKnown RBP9.87□□□□□ -0.83
PRKDC-205ENST00000535375 HCN2Q9UL51 889 aa9.87□□□□□ -0.83
PRKDC-205ENST00000535375 CARNS1A5YM72 827 aa9.86□□□□□ -0.83
PRKDC-205ENST00000535375 PCBP4P57723 403 aaKnown RBP9.86□□□□□ -0.83
PRKDC-205ENST00000535375 SSFA2P28290 1259 aa9.85□□□□□ -0.83
PRKDC-205ENST00000535375 INPP5BP32019 993 aa9.85□□□□□ -0.83
PRKDC-205ENST00000535375 ARSDP51689 593 aa9.85□□□□□ -0.83
PRKDC-205ENST00000535375 B4GALNT3Q6L9W6 998 aa9.85□□□□□ -0.83
PRKDC-205ENST00000535375 SLCO4C1Q6ZQN7 724 aa9.85□□□□□ -0.83
PRKDC-205ENST00000535375 SYT9Q86SS6 491 aa9.85□□□□□ -0.83
PRKDC-205ENST00000535375 TREML1Q86YW5 311 aa9.85□□□□□ -0.83
PRKDC-205ENST00000535375 EDARADDQ8WWZ3 215 aa9.85□□□□□ -0.83
PRKDC-205ENST00000535375 SLC30A3Q99726 388 aa9.85□□□□□ -0.83
PRKDC-205ENST00000535375 MTMR7Q9Y216 660 aa9.85□□□□□ -0.83
PRKDC-205ENST00000535375 AMPD1P23109 780 aa9.84□□□□□ -0.83
PRKDC-205ENST00000535375 GRIN2CQ14957 1233 aa9.84□□□□□ -0.83
PRKDC-205ENST00000535375 PNMA5Q96PV4 448 aa9.84□□□□□ -0.83
PRKDC-205ENST00000535375 SEPT3Q9UH03 358 aa9.84□□□□□ -0.83
PRKDC-205ENST00000535375 RAB44Q7Z6P3 723 aaPredicted RBP9.83□□□□□ -0.84
PRKDC-205ENST00000535375 RETREG2Q8NC44 543 aa9.83□□□□□ -0.84
PRKDC-205ENST00000535375 EPXP11678 715 aa9.82□□□□□ -0.84
PRKDC-205ENST00000535375 BHMTQ93088 406 aa9.82□□□□□ -0.84
PRKDC-205ENST00000535375 STIM2Q9P246 746 aa9.82□□□□□ -0.84
PRKDC-205ENST00000535375 ALAS2P22557 587 aa9.81□□□□□ -0.84
PRKDC-205ENST00000535375 CCINQ13939 588 aa9.81□□□□□ -0.84
PRKDC-205ENST00000535375 C1orf229Q6ZS94 237 aaPredicted RBP9.81□□□□□ -0.84
PRKDC-205ENST00000535375 SCARF2Q96GP6 870 aaPredicted RBP9.81□□□□□ -0.84
PRKDC-205ENST00000535375 EFCC1Q9HA90 598 aa9.81□□□□□ -0.84
PRKDC-205ENST00000535375 RRAGCQ9HB90 399 aa9.81□□□□□ -0.84
PRKDC-205ENST00000535375 FAM13BQ9NYF5 915 aa9.81□□□□□ -0.84
PRKDC-205ENST00000535375 KLF15Q9UIH9 416 aa9.81□□□□□ -0.84
PRKDC-205ENST00000535375 SIN3BO75182 1162 aa9.8□□□□□ -0.84
PRKDC-205ENST00000535375 SCNN1AP37088 669 aa9.8□□□□□ -0.84
PRKDC-205ENST00000535375 RASSF7Q02833 373 aa9.8□□□□□ -0.84
PRKDC-205ENST00000535375 PODNQ7Z5L7 613 aa9.8□□□□□ -0.84
PRKDC-205ENST00000535375 FCHSD1Q86WN1 690 aa9.8□□□□□ -0.84
PRKDC-205ENST00000535375 ETFBKMTQ8IXQ9 262 aa9.8□□□□□ -0.84
PRKDC-205ENST00000535375 RGL4Q8IZJ4 473 aa9.8□□□□□ -0.84
PRKDC-205ENST00000535375 CMTR1Q8N1G2 835 aaKnown RBP9.8□□□□□ -0.84
PRKDC-205ENST00000535375 TMEM151AQ8N4L1 468 aa9.8□□□□□ -0.84
PRKDC-205ENST00000535375 ABTB2Q8N961 1025 aa9.8□□□□□ -0.84
PRKDC-205ENST00000535375 RTCBQ9Y3I0 505 aaKnown RBP9.8□□□□□ -0.84
PRKDC-205ENST00000535375 SHISA8B8ZZ34 492 aa9.79□□□□□ -0.84
PRKDC-205ENST00000535375 TNFRSF10BO14763 440 aa9.79□□□□□ -0.84
PRKDC-205ENST00000535375 OPLAHO14841 1288 aa9.79□□□□□ -0.84
PRKDC-205ENST00000535375 GTF3C2Q8WUA4 911 aaPredicted RBP9.79□□□□□ -0.84
PRKDC-205ENST00000535375 GSX2Q9BZM3 304 aa9.79□□□□□ -0.84
PRKDC-205ENST00000535375 IGFLR1Q9H665 355 aa9.79□□□□□ -0.84
PRKDC-205ENST00000535375 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.79□□□□□ -0.84
PRKDC-205ENST00000535375 GDF11O95390 407 aa9.78□□□□□ -0.84
PRKDC-205ENST00000535375 IRS1P35568 1242 aa9.78□□□□□ -0.84
PRKDC-205ENST00000535375 GSK3AP49840 483 aa9.78□□□□□ -0.84
PRKDC-205ENST00000535375 PIK3R5Q8WYR1 880 aa9.78□□□□□ -0.84
PRKDC-205ENST00000535375 BTBD6Q96KE9 485 aa9.78□□□□□ -0.84
PRKDC-205ENST00000535375 C11orf16Q9NQ32 467 aa9.78□□□□□ -0.84
PRKDC-205ENST00000535375 USP20Q9Y2K6 914 aa9.78□□□□□ -0.84
PRKDC-205ENST00000535375 ELOA3CA0A087WX78 387 aaPredicted RBP9.77□□□□□ -0.85
PRKDC-205ENST00000535375 ELOA3DA6NLF2 546 aaPredicted RBP9.77□□□□□ -0.85
PRKDC-205ENST00000535375 ZAP70P43403 619 aa9.77□□□□□ -0.85
PRKDC-205ENST00000535375 TBC1D8BQ0IIM8 1120 aa9.77□□□□□ -0.85
PRKDC-205ENST00000535375 ELOA3BQ3SY89 546 aa9.77□□□□□ -0.85
PRKDC-205ENST00000535375 PHLDB3Q6NSJ2 640 aa9.77□□□□□ -0.85
PRKDC-205ENST00000535375 KRT25Q7Z3Z0 450 aa9.77□□□□□ -0.85
PRKDC-205ENST00000535375 BEND7Q8N7W2 519 aaPredicted RBP9.77□□□□□ -0.85
PRKDC-205ENST00000535375 ELOA3Q8NG57 546 aa9.77□□□□□ -0.85
PRKDC-205ENST00000535375 HELQQ8TDG4 1101 aa9.77□□□□□ -0.85
PRKDC-205ENST00000535375 XYLBO75191 536 aa9.76□□□□□ -0.85
PRKDC-205ENST00000535375 NFKB1P19838 968 aa9.76□□□□□ -0.85
PRKDC-205ENST00000535375 KANK3Q6NY19 840 aa9.76□□□□□ -0.85
PRKDC-205ENST00000535375 UBE2OQ9C0C9 1292 aaKnown RBP9.76□□□□□ -0.85
PRKDC-205ENST00000535375 ABL1P00519 1130 aa9.75□□□□□ -0.85
PRKDC-205ENST00000535375 ARID4AP29374 1257 aaPredicted RBP9.75□□□□□ -0.85
PRKDC-205ENST00000535375 TNFRSF25Q93038 417 aa9.75□□□□□ -0.85
PRKDC-205ENST00000535375 ADARB2-AS1A8MUL3 147 aa9.74□□□□□ -0.85
PRKDC-205ENST00000535375 PHF20L1A8MW92 1017 aa9.74□□□□□ -0.85
PRKDC-205ENST00000535375 SASH3O75995 380 aa9.74□□□□□ -0.85
PRKDC-205ENST00000535375 RARAP10276 462 aa9.74□□□□□ -0.85
PRKDC-205ENST00000535375 GRNP28799 593 aaKnown RBP9.74□□□□□ -0.85
PRKDC-205ENST00000535375 ADH7P40394 386 aa9.74□□□□□ -0.85
PRKDC-205ENST00000535375 CHSY3Q70JA7 882 aa9.74□□□□□ -0.85
PRKDC-205ENST00000535375 KCTD17Q8N5Z5 321 aa9.74□□□□□ -0.85
PRKDC-205ENST00000535375 FNDC3AQ9Y2H6 1198 aaKnown RBP9.74□□□□□ -0.85
PRKDC-205ENST00000535375 PIK3R2O00459 728 aa9.73□□□□□ -0.85
PRKDC-205ENST00000535375 AAMPQ13685 434 aa9.73□□□□□ -0.85
PRKDC-205ENST00000535375 NOM1Q5C9Z4 860 aaKnown RBP9.73□□□□□ -0.85
PRKDC-205ENST00000535375 FAM26DQ5JW98 314 aa9.73□□□□□ -0.85
PRKDC-205ENST00000535375 GPR152Q8TDT2 470 aa9.73□□□□□ -0.85
PRKDC-205ENST00000535375 MKL2Q9ULH7 1088 aa9.73□□□□□ -0.85
PRKDC-205ENST00000535375 UBAP1LF5GYI3 381 aa9.72□□□□□ -0.85
PRKDC-205ENST00000535375 ZBTB39O15060 712 aa9.72□□□□□ -0.85
PRKDC-205ENST00000535375 FAM13AO94988 1023 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms