RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 NECTIN2Q92692 538 aa12.67□□□□□ -0.38
LDLRAD3-206ENST00000534091 ZNF330Q9Y3S2 320 aaPredicted RBP12.67□□□□□ -0.38
LDLRAD3-206ENST00000534091 PCDHB15Q9Y5E8 787 aa12.67□□□□□ -0.38
LDLRAD3-206ENST00000534091 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
LDLRAD3-206ENST00000534091 PDE6BP35913 854 aa12.66□□□□□ -0.38
LDLRAD3-206ENST00000534091 TBC1D9BQ66K14 1250 aa12.66□□□□□ -0.38
LDLRAD3-206ENST00000534091 BRIP1Q9BX63 1249 aa12.66□□□□□ -0.38
LDLRAD3-206ENST00000534091 PHAXQ9H814 394 aaKnown RBP12.66□□□□□ -0.38
LDLRAD3-206ENST00000534091 MAP3K15Q6ZN16 1313 aa12.65□□□□□ -0.38
LDLRAD3-206ENST00000534091 DPEP1P16444 411 aa12.65□□□□□ -0.38
LDLRAD3-206ENST00000534091 KIF6Q6ZMV9 814 aa12.65□□□□□ -0.38
LDLRAD3-206ENST00000534091 LRP10Q7Z4F1 713 aa12.65□□□□□ -0.38
LDLRAD3-206ENST00000534091 ADCY9O60503 1353 aa12.65□□□□□ -0.38
LDLRAD3-206ENST00000534091 NUP98P52948 1817 aa12.65□□□□□ -0.39
LDLRAD3-206ENST00000534091 A0A0G2JLW4 131 aa12.64□□□□□ -0.39
LDLRAD3-206ENST00000534091 F6X3S4 739 aa12.64□□□□□ -0.39
LDLRAD3-206ENST00000534091 DDX58O95786 925 aaKnown RBP12.64□□□□□ -0.39
LDLRAD3-206ENST00000534091 KCNA3P22001 575 aa12.64□□□□□ -0.39
LDLRAD3-206ENST00000534091 ST5P78524 1137 aa12.64□□□□□ -0.39
LDLRAD3-206ENST00000534091 PROSER3Q2NL68 480 aa12.64□□□□□ -0.39
LDLRAD3-206ENST00000534091 DALRD3Q5D0E6 543 aaKnown RBP12.64□□□□□ -0.39
LDLRAD3-206ENST00000534091 KSR2Q6VAB6 950 aa12.64□□□□□ -0.39
LDLRAD3-206ENST00000534091 TPTE2Q6XPS3 522 aa12.64□□□□□ -0.39
LDLRAD3-206ENST00000534091 CNBD1Q8NA66 436 aa12.64□□□□□ -0.39
LDLRAD3-206ENST00000534091 DNAAF4Q8WXU2 420 aa12.64□□□□□ -0.39
LDLRAD3-206ENST00000534091 RWDD1Q9H446 243 aaPredicted RBP12.64□□□□□ -0.39
LDLRAD3-206ENST00000534091 H0YIN7 160 aa12.63□□□□□ -0.39
LDLRAD3-206ENST00000534091 PRR5LQ6MZQ0 368 aa12.63□□□□□ -0.39
LDLRAD3-206ENST00000534091 GIGYF2Q6Y7W6 1299 aaKnown RBP12.63□□□□□ -0.39
LDLRAD3-206ENST00000534091 NYXQ9GZU5 481 aa12.63□□□□□ -0.39
LDLRAD3-206ENST00000534091 IGHDP01880 384 aa12.62□□□□□ -0.39
LDLRAD3-206ENST00000534091 ANXA1P04083 346 aa12.62□□□□□ -0.39
LDLRAD3-206ENST00000534091 PARP10Q53GL7 1025 aa12.62□□□□□ -0.39
LDLRAD3-206ENST00000534091 HSP90AB3PQ58FF7 597 aa12.62□□□□□ -0.39
LDLRAD3-206ENST00000534091 BICDL1Q6ZP65 573 aa12.62□□□□□ -0.39
LDLRAD3-206ENST00000534091 NBPF5PQ86XG9 351 aaPredicted RBP12.62□□□□□ -0.39
LDLRAD3-206ENST00000534091 NIP7Q9Y221 180 aaKnown RBP eCLIP12.62□□□□□ -0.39
LDLRAD3-206ENST00000534091 BCS1LQ9Y276 419 aa12.62□□□□□ -0.39
LDLRAD3-206ENST00000534091 RIC1Q4ADV7 1423 aa12.62□□□□□ -0.39
LDLRAD3-206ENST00000534091 ANKRD31Q8N7Z5 1873 aa12.61□□□□□ -0.39
LDLRAD3-206ENST00000534091 ANKRD36CQ5JPF3 1778 aa12.61□□□□□ -0.39
LDLRAD3-206ENST00000534091 KLRG2A4D1S0 409 aaPredicted RBP12.61□□□□□ -0.39
LDLRAD3-206ENST00000534091 PI4KAP2A4QPH2 592 aa12.61□□□□□ -0.39
LDLRAD3-206ENST00000534091 NPHP1O15259 732 aa12.61□□□□□ -0.39
LDLRAD3-206ENST00000534091 ALDH1L1O75891 902 aa12.61□□□□□ -0.39
LDLRAD3-206ENST00000534091 GNAI3P08754 354 aa12.61□□□□□ -0.39
LDLRAD3-206ENST00000534091 PIP4K2AP48426 406 aaPredicted RBP12.61□□□□□ -0.39
LDLRAD3-206ENST00000534091 BEND3Q5T5X7 828 aa12.61□□□□□ -0.39
LDLRAD3-206ENST00000534091 SLC4A10Q6U841 1118 aa12.61□□□□□ -0.39
LDLRAD3-206ENST00000534091 RPAP2Q8IXW5 612 aaPredicted RBP12.61□□□□□ -0.39
LDLRAD3-206ENST00000534091 TTLL6Q8N841 843 aa12.61□□□□□ -0.39
LDLRAD3-206ENST00000534091 PI4KAP1Q8N8J0 262 aa12.61□□□□□ -0.39
LDLRAD3-206ENST00000534091 SRCIN1Q9C0H9 1055 aa12.61□□□□□ -0.39
LDLRAD3-206ENST00000534091 MYL6BP14649 208 aa12.6□□□□□ -0.39
LDLRAD3-206ENST00000534091 STYK1Q6J9G0 422 aa12.6□□□□□ -0.39
LDLRAD3-206ENST00000534091 C2CD5Q86YS7 1000 aa12.6□□□□□ -0.39
LDLRAD3-206ENST00000534091 SMC5Q8IY18 1101 aa12.6□□□□□ -0.39
LDLRAD3-206ENST00000534091 CNKSR1Q969H4 720 aa12.6□□□□□ -0.39
LDLRAD3-206ENST00000534091 MEIS3Q99687 375 aa12.6□□□□□ -0.39
LDLRAD3-206ENST00000534091 HLFQ16534 295 aa12.59□□□□□ -0.39
LDLRAD3-206ENST00000534091 SOGA3Q5TF21 947 aa12.59□□□□□ -0.39
LDLRAD3-206ENST00000534091 PPP1R42Q7Z4L9 355 aa12.59□□□□□ -0.39
LDLRAD3-206ENST00000534091 ZNF34Q8IZ26 560 aa12.59□□□□□ -0.39
LDLRAD3-206ENST00000534091 ZNF784Q8NCA9 323 aaPredicted RBP12.59□□□□□ -0.39
LDLRAD3-206ENST00000534091 LINS1Q8NG48 757 aa12.59□□□□□ -0.39
LDLRAD3-206ENST00000534091 XAGE3Q8WTP9 111 aa12.59□□□□□ -0.39
LDLRAD3-206ENST00000534091 MASTLQ96GX5 879 aa12.59□□□□□ -0.39
LDLRAD3-206ENST00000534091 MAP3K2Q9Y2U5 619 aa12.59□□□□□ -0.39
LDLRAD3-206ENST00000534091 ZC3H4Q9UPT8 1303 aaKnown RBP12.59□□□□□ -0.39
LDLRAD3-206ENST00000534091 GNAI2P04899 355 aa12.58□□□□□ -0.4
LDLRAD3-206ENST00000534091 SRGNP10124 158 aa12.58□□□□□ -0.4
LDLRAD3-206ENST00000534091 CHRNA5P30532 468 aa12.58□□□□□ -0.4
LDLRAD3-206ENST00000534091 TTLL7Q6ZT98 887 aa12.58□□□□□ -0.4
LDLRAD3-206ENST00000534091 COPS6Q7L5N1 327 aa12.58□□□□□ -0.4
LDLRAD3-206ENST00000534091 ANKRD44Q8N8A2 993 aa12.58□□□□□ -0.4
LDLRAD3-206ENST00000534091 PLBD2Q8NHP8 589 aa12.58□□□□□ -0.4
LDLRAD3-206ENST00000534091 UTYO14607 1347 aa12.58□□□□□ -0.4
LDLRAD3-206ENST00000534091 NPR1P16066 1061 aa12.57□□□□□ -0.4
LDLRAD3-206ENST00000534091 GTF2E1P29083 439 aaPredicted RBP12.57□□□□□ -0.4
LDLRAD3-206ENST00000534091 CEP85Q6P2H3 762 aa12.57□□□□□ -0.4
LDLRAD3-206ENST00000534091 ANKRD13DQ6ZTN6 518 aa12.57□□□□□ -0.4
LDLRAD3-206ENST00000534091 GCC1Q96CN9 775 aa12.57□□□□□ -0.4
LDLRAD3-206ENST00000534091 METTL22Q9BUU2 404 aaPredicted RBP12.57□□□□□ -0.4
LDLRAD3-206ENST00000534091 USP44Q9H0E7 712 aa12.57□□□□□ -0.4
LDLRAD3-206ENST00000534091 C1orf115Q9H7X2 142 aa12.57□□□□□ -0.4
LDLRAD3-206ENST00000534091 HDAC5Q9UQL6 1122 aa12.57□□□□□ -0.4
LDLRAD3-206ENST00000534091 UBTFL1P0CB47 393 aaPredicted RBP12.56□□□□□ -0.4
LDLRAD3-206ENST00000534091 ALDH1B1P30837 517 aa12.56□□□□□ -0.4
LDLRAD3-206ENST00000534091 NEXNQ0ZGT2 675 aa12.56□□□□□ -0.4
LDLRAD3-206ENST00000534091 GRIPAP1Q4V328 841 aa12.56□□□□□ -0.4
LDLRAD3-206ENST00000534091 ARHGAP27Q6ZUM4 889 aa12.56□□□□□ -0.4
LDLRAD3-206ENST00000534091 RIC3Q7Z5B4 369 aa12.56□□□□□ -0.4
LDLRAD3-206ENST00000534091 SIRT2Q8IXJ6 389 aa12.56□□□□□ -0.4
LDLRAD3-206ENST00000534091 ZBTB3Q9H5J0 574 aa12.56□□□□□ -0.4
LDLRAD3-206ENST00000534091 SBF1O95248 1867 aa12.56□□□□□ -0.4
LDLRAD3-206ENST00000534091 COL11A2P13942 1736 aaPredicted RBP12.55□□□□□ -0.4
LDLRAD3-206ENST00000534091 HMMRO75330 724 aa12.55□□□□□ -0.4
LDLRAD3-206ENST00000534091 AIMP1Q12904 312 aaKnown RBP12.55□□□□□ -0.4
LDLRAD3-206ENST00000534091 TRIM28Q13263 835 aaKnown RBP12.55□□□□□ -0.4
LDLRAD3-206ENST00000534091 TCIRG1Q13488 830 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms