RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 NDUFB9Q9Y6M9 179 aa23.07■■□□□ 1.28
CAPN1-226ENST00000533820 EAF2Q96CJ1 260 aaPredicted RBP23.06■■□□□ 1.28
CAPN1-226ENST00000533820 GPATCH3Q96I76 525 aa23.06■■□□□ 1.28
CAPN1-226ENST00000533820 TFIP11Q9UBB9 837 aaKnown RBP23.06■■□□□ 1.28
CAPN1-226ENST00000533820 FAM184AQ8NB25 1140 aa23.06■■□□□ 1.28
CAPN1-226ENST00000533820 SUCLG2Q96I99 432 aa23.06■■□□□ 1.28
CAPN1-226ENST00000533820 C1orf141Q5JVX7 400 aa23.05■■□□□ 1.28
CAPN1-226ENST00000533820 TMEM87AQ8NBN3 555 aa23.05■■□□□ 1.28
CAPN1-226ENST00000533820 TTC41PQ6P2S7 1318 aa23.05■■□□□ 1.28
CAPN1-226ENST00000533820 CEMIPQ8WUJ3 1361 aa23.05■■□□□ 1.28
CAPN1-226ENST00000533820 PXDNLA1KZ92 1463 aa23.05■■□□□ 1.28
CAPN1-226ENST00000533820 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.05■■□□□ 1.28
CAPN1-226ENST00000533820 AP5Z1O43299 807 aa23.05■■□□□ 1.28
CAPN1-226ENST00000533820 PIP4K2AP48426 406 aaPredicted RBP23.05■■□□□ 1.28
CAPN1-226ENST00000533820 CREB3L3Q68CJ9 461 aa23.05■■□□□ 1.28
CAPN1-226ENST00000533820 THEMISQ8N1K5 641 aaPredicted RBP23.05■■□□□ 1.28
CAPN1-226ENST00000533820 BICC1Q9H694 974 aaKnown RBP23.05■■□□□ 1.28
CAPN1-226ENST00000533820 CCDC171Q6TFL3 1326 aa23.05■■□□□ 1.28
CAPN1-226ENST00000533820 FSD1Q9BTV5 496 aa23.05■■□□□ 1.28
CAPN1-226ENST00000533820 MYL6BP14649 208 aa23.04■■□□□ 1.28
CAPN1-226ENST00000533820 VPS53Q5VIR6 699 aa23.04■■□□□ 1.28
CAPN1-226ENST00000533820 CDC37L1Q7L3B6 337 aa23.04■■□□□ 1.28
CAPN1-226ENST00000533820 A0A0D9SFI3 127 aa23.04■■□□□ 1.28
CAPN1-226ENST00000533820 SASH1O94885 1247 aa23.04■■□□□ 1.28
CAPN1-226ENST00000533820 TERF1P54274 439 aa23.04■■□□□ 1.28
CAPN1-226ENST00000533820 G3BP1Q13283 466 aaKnown RBP eCLIP23.04■■□□□ 1.283e-6■■■□□ 16
CAPN1-226ENST00000533820 NOLC1Q14978 699 aaKnown RBP eCLIP23.04■■□□□ 1.28
CAPN1-226ENST00000533820 ZSWIM6Q9HCJ5 1215 aa23.04■■□□□ 1.28
CAPN1-226ENST00000533820 LRRC37A3O60309 1634 aa23.04■■□□□ 1.28
CAPN1-226ENST00000533820 IGSF3O75054 1194 aa23.03■■□□□ 1.28
CAPN1-226ENST00000533820 SLC39A6Q13433 755 aa23.03■■□□□ 1.28
CAPN1-226ENST00000533820 KDM4AO75164 1064 aa23.03■■□□□ 1.28
CAPN1-226ENST00000533820 CKAP2LQ8IYA6 745 aa23.03■■□□□ 1.28
CAPN1-226ENST00000533820 CACNA1FO60840 1977 aa23.03■■□□□ 1.28
CAPN1-226ENST00000533820 CHGBP05060 677 aa23.02■■□□□ 1.28
CAPN1-226ENST00000533820 NECTIN1Q15223 517 aa23.02■■□□□ 1.28
CAPN1-226ENST00000533820 KSR2Q6VAB6 950 aa23.02■■□□□ 1.28
CAPN1-226ENST00000533820 EVI5LQ96CN4 794 aa23.02■■□□□ 1.28
CAPN1-226ENST00000533820 EPB41L2O43491 1005 aaKnown RBP23.02■■□□□ 1.28
CAPN1-226ENST00000533820 GIGYF1O75420 1035 aaPredicted RBP23.02■■□□□ 1.28
CAPN1-226ENST00000533820 PLEKHO1Q53GL0 409 aaPredicted RBP23.02■■□□□ 1.28
CAPN1-226ENST00000533820 CCDC94Q9BW85 323 aaPredicted RBP23.02■■□□□ 1.28
CAPN1-226ENST00000533820 RNMTO43148 476 aaKnown RBP23.01■■□□□ 1.27
CAPN1-226ENST00000533820 UVSSAQ2YD98 709 aa23.01■■□□□ 1.27
CAPN1-226ENST00000533820 AKAP4Q5JQC9 854 aa23.01■■□□□ 1.27
CAPN1-226ENST00000533820 TTC6Q86TZ1 520 aa23.01■■□□□ 1.27
CAPN1-226ENST00000533820 KAZALD1Q96I82 304 aa23.01■■□□□ 1.27
CAPN1-226ENST00000533820 LIG1P18858 919 aa23■■□□□ 1.27
CAPN1-226ENST00000533820 GRM8O00222 908 aa23■■□□□ 1.27
CAPN1-226ENST00000533820 SLC27A2O14975 620 aa23■■□□□ 1.27
CAPN1-226ENST00000533820 FOSBP53539 338 aa23■■□□□ 1.27
CAPN1-226ENST00000533820 PPFIA3O75145 1194 aa22.99■■□□□ 1.27
CAPN1-226ENST00000533820 LETM1O95202 739 aaPredicted RBP22.99■■□□□ 1.27
CAPN1-226ENST00000533820 MTERF4Q7Z6M4 381 aaKnown RBP22.99■■□□□ 1.27
CAPN1-226ENST00000533820 ZNF589Q86UQ0 364 aaPredicted RBP22.99■■□□□ 1.27
CAPN1-226ENST00000533820 CDK11BP21127 795 aaKnown RBP22.99■■□□□ 1.27
CAPN1-226ENST00000533820 RIC3Q7Z5B4 369 aa22.99■■□□□ 1.27
CAPN1-226ENST00000533820 PIBF1Q8WXW3 757 aa22.99■■□□□ 1.27
CAPN1-226ENST00000533820 ZSCAN31Q96LW9 406 aaPredicted RBP22.99■■□□□ 1.27
CAPN1-226ENST00000533820 SH2B1Q9NRF2 756 aaPredicted RBP22.99■■□□□ 1.27
CAPN1-226ENST00000533820 DYNC1I1O14576 645 aa22.98■■□□□ 1.27
CAPN1-226ENST00000533820 BLOC1S2Q6QNY1 142 aa22.98■■□□□ 1.27
CAPN1-226ENST00000533820 GOLGA6L4A6NEF3 574 aa22.97■■□□□ 1.27
CAPN1-226ENST00000533820 HOXB7P09629 217 aa22.97■■□□□ 1.27
CAPN1-226ENST00000533820 ERC1Q8IUD2 1116 aa22.97■■□□□ 1.27
CAPN1-226ENST00000533820 USP42Q9H9J4 1324 aaKnown RBP22.97■■□□□ 1.27
CAPN1-226ENST00000533820 MTX1Q13505 466 aa22.97■■□□□ 1.27
CAPN1-226ENST00000533820 LUZP1Q86V48 1076 aa22.97■■□□□ 1.27
CAPN1-226ENST00000533820 DDX11Q96FC9 970 aa22.97■■□□□ 1.27
CAPN1-226ENST00000533820 CGNQ9P2M7 1197 aaKnown RBP22.97■■□□□ 1.27
CAPN1-226ENST00000533820 LARP1Q6PKG0 1096 aaKnown RBP22.97■■□□□ 1.27
CAPN1-226ENST00000533820 FUCA2Q9BTY2 467 aa22.97■■□□□ 1.27
CAPN1-226ENST00000533820 CHMP4AQ9BY43 222 aa22.97■■□□□ 1.27
CAPN1-226ENST00000533820 PYCARDQ9ULZ3 195 aa22.97■■□□□ 1.27
CAPN1-226ENST00000533820 MAP4K1Q92918 833 aa22.96■■□□□ 1.27
CAPN1-226ENST00000533820 ALDH1L1O75891 902 aa22.96■■□□□ 1.27
CAPN1-226ENST00000533820 KRT85P78386 507 aa22.96■■□□□ 1.27
CAPN1-226ENST00000533820 LRRC2Q9BYS8 371 aa22.96■■□□□ 1.27
CAPN1-226ENST00000533820 CEBPZQ03701 1054 aaKnown RBP22.95■■□□□ 1.27
CAPN1-226ENST00000533820 DACT1Q9NYF0 836 aa22.95■■□□□ 1.26
CAPN1-226ENST00000533820 PXDNQ92626 1479 aa22.95■■□□□ 1.26
CAPN1-226ENST00000533820 CCDC192P0DO97 292 aa22.95■■□□□ 1.26
CAPN1-226ENST00000533820 EPHA10Q5JZY3 1008 aa22.95■■□□□ 1.26
CAPN1-226ENST00000533820 CCDC129Q6ZRS4 1044 aa22.95■■□□□ 1.26
CAPN1-226ENST00000533820 LINS1Q8NG48 757 aa22.95■■□□□ 1.26
CAPN1-226ENST00000533820 ORAI2Q96SN7 254 aa22.95■■□□□ 1.26
CAPN1-226ENST00000533820 TM6SF1Q9BZW5 370 aa22.95■■□□□ 1.26
CAPN1-226ENST00000533820 JAK2O60674 1132 aa22.94■■□□□ 1.26
CAPN1-226ENST00000533820 ANKRD24Q8TF21 1146 aa22.94■■□□□ 1.26
CAPN1-226ENST00000533820 NUP62CLQ9H1M0 184 aa22.94■■□□□ 1.26
CAPN1-226ENST00000533820 ZFP91Q96JP5 570 aaPredicted RBP22.94■■□□□ 1.26
CAPN1-226ENST00000533820 GCP02774 474 aa22.93■■□□□ 1.26
CAPN1-226ENST00000533820 DNAJC2Q99543 621 aaKnown RBP22.93■■□□□ 1.26
CAPN1-226ENST00000533820 KCNF1Q9H3M0 494 aa22.93■■□□□ 1.26
CAPN1-226ENST00000533820 IGKV5-2P06315 115 aa22.93■■□□□ 1.26
CAPN1-226ENST00000533820 SEC62Q99442 399 aaKnown RBP22.93■■□□□ 1.26
CAPN1-226ENST00000533820 MYD88Q99836 296 aa22.93■■□□□ 1.26
CAPN1-226ENST00000533820 AXIN2Q9Y2T1 843 aa22.93■■□□□ 1.26
CAPN1-226ENST00000533820 KIF20AO95235 890 aa22.93■■□□□ 1.26
CAPN1-226ENST00000533820 PSMA5P28066 241 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms