RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 MIER1Q8N108 512 aa20.33■□□□□ 0.85
TSKU-204ENST00000533752 PHAXQ9H814 394 aaKnown RBP20.33■□□□□ 0.85
TSKU-204ENST00000533752 SPINK5Q9NQ38 1064 aaPredicted RBP20.33■□□□□ 0.85
TSKU-204ENST00000533752 ARFGEF2Q9Y6D5 1785 aa20.33■□□□□ 0.84
TSKU-204ENST00000533752 VAMP4O75379 141 aa20.31■□□□□ 0.84
TSKU-204ENST00000533752 TRIM28Q13263 835 aaKnown RBP20.31■□□□□ 0.84
TSKU-204ENST00000533752 CRY2Q49AN0 593 aa20.31■□□□□ 0.84
TSKU-204ENST00000533752 SOGA3Q5TF21 947 aa20.31■□□□□ 0.84
TSKU-204ENST00000533752 ISCA1Q9BUE6 129 aa20.31■□□□□ 0.84
TSKU-204ENST00000533752 TNRC6CQ9HCJ0 1690 aaKnown RBP20.31■□□□□ 0.84
TSKU-204ENST00000533752 SH3TC1Q8TE82 1336 aa20.3■□□□□ 0.84
TSKU-204ENST00000533752 PRPF40BQ6NWY9 871 aaKnown RBP20.3■□□□□ 0.84
TSKU-204ENST00000533752 TRMT112Q9UI30 125 aaKnown RBP20.3■□□□□ 0.84
TSKU-204ENST00000533752 SLC4A2P04920 1241 aa20.29■□□□□ 0.84
TSKU-204ENST00000533752 ALDH1B1P30837 517 aa20.29■□□□□ 0.84
TSKU-204ENST00000533752 SLC10A5Q5PT55 438 aa20.29■□□□□ 0.84
TSKU-204ENST00000533752 RPGRQ92834 1020 aaKnown RBP20.29■□□□□ 0.84
TSKU-204ENST00000533752 ADCY9O60503 1353 aa20.29■□□□□ 0.84
TSKU-204ENST00000533752 NLRP3Q96P20 1036 aa20.28■□□□□ 0.84
TSKU-204ENST00000533752 CACNA1FO60840 1977 aa20.28■□□□□ 0.84
TSKU-204ENST00000533752 ATP5J2-PTCD1G3V325 749 aa20.27■□□□□ 0.84
TSKU-204ENST00000533752 TCERG1O14776 1098 aaKnown RBP20.27■□□□□ 0.84
TSKU-204ENST00000533752 KSR2Q6VAB6 950 aa20.27■□□□□ 0.84
TSKU-204ENST00000533752 ZNF784Q8NCA9 323 aaPredicted RBP20.27■□□□□ 0.84
TSKU-204ENST00000533752 METTL22Q9BUU2 404 aaPredicted RBP20.27■□□□□ 0.84
TSKU-204ENST00000533752 HSP90B1P14625 803 aaKnown RBP20.26■□□□□ 0.83
TSKU-204ENST00000533752 NEXNQ0ZGT2 675 aa20.26■□□□□ 0.83
TSKU-204ENST00000533752 FLIIQ13045 1269 aa20.26■□□□□ 0.83
TSKU-204ENST00000533752 CCDC191Q8NCU4 936 aa20.26■□□□□ 0.83
TSKU-204ENST00000533752 RBM17Q96I25 401 aaKnown RBP20.26■□□□□ 0.83
TSKU-204ENST00000533752 MYD88Q99836 296 aa20.26■□□□□ 0.83
TSKU-204ENST00000533752 MAP3K2Q9Y2U5 619 aa20.26■□□□□ 0.83
TSKU-204ENST00000533752 PI4KAP2A4QPH2 592 aa20.25■□□□□ 0.83
TSKU-204ENST00000533752 C21orf2O43822 256 aa20.25■□□□□ 0.83
TSKU-204ENST00000533752 HOXA10P31260 410 aaPredicted RBP20.25■□□□□ 0.83
TSKU-204ENST00000533752 SLFN5Q08AF3 891 aa20.25■□□□□ 0.83
TSKU-204ENST00000533752 PI4KAP1Q8N8J0 262 aa20.25■□□□□ 0.83
TSKU-204ENST00000533752 FKBP5Q13451 457 aaPredicted RBP20.24■□□□□ 0.83
TSKU-204ENST00000533752 CRAMP1Q96RY5 1269 aa20.24■□□□□ 0.83
TSKU-204ENST00000533752 CWC25Q9NXE8 425 aaPredicted RBP20.24■□□□□ 0.83
TSKU-204ENST00000533752 SLX4Q8IY92 1834 aa20.23■□□□□ 0.83
TSKU-204ENST00000533752 CACNA1SQ13698 1873 aa20.23■□□□□ 0.83
TSKU-204ENST00000533752 CCDC93Q567U6 631 aa20.23■□□□□ 0.83
TSKU-204ENST00000533752 C9orf131Q5VYM1 1079 aa20.23■□□□□ 0.83
TSKU-204ENST00000533752 ZBTB38Q8NAP3 1195 aaPredicted RBP20.23■□□□□ 0.83
TSKU-204ENST00000533752 ZNF428Q96B54 188 aa20.23■□□□□ 0.83
TSKU-204ENST00000533752 LTBP3Q9NS15 1303 aa20.23■□□□□ 0.83
TSKU-204ENST00000533752 HCLS1P14317 486 aaPredicted RBP20.22■□□□□ 0.83
TSKU-204ENST00000533752 LMNB1P20700 586 aa20.22■□□□□ 0.83
TSKU-204ENST00000533752 G2E3Q7L622 706 aa20.22■□□□□ 0.83
TSKU-204ENST00000533752 TAOK3Q9H2K8 898 aa20.22■□□□□ 0.83
TSKU-204ENST00000533752 RNF181Q9P0P0 153 aa20.22■□□□□ 0.83
TSKU-204ENST00000533752 ZNF219Q9P2Y4 722 aaPredicted RBP20.22■□□□□ 0.83
TSKU-204ENST00000533752 ZC3H4Q9UPT8 1303 aaKnown RBP20.22■□□□□ 0.83
TSKU-204ENST00000533752 NFKBIEO00221 500 aa20.21■□□□□ 0.83
TSKU-204ENST00000533752 RASSF7Q02833 373 aa20.21■□□□□ 0.83
TSKU-204ENST00000533752 CC2D2BQ6DHV5 1058 aa20.21■□□□□ 0.83
TSKU-204ENST00000533752 C3orf67Q6ZVT6 689 aa20.21■□□□□ 0.83
TSKU-204ENST00000533752 C7orf43Q8WVR3 580 aa20.21■□□□□ 0.83
TSKU-204ENST00000533752 FAM89AQ96GI7 184 aa20.21■□□□□ 0.83
TSKU-204ENST00000533752 LAMB2P55268 1798 aa20.21■□□□□ 0.83
TSKU-204ENST00000533752 PCCAP05165 728 aaPredicted RBP20.2■□□□□ 0.82
TSKU-204ENST00000533752 CT47B1P0C2W7 299 aaPredicted RBP20.2■□□□□ 0.82
TSKU-204ENST00000533752 GRIPAP1Q4V328 841 aa20.2■□□□□ 0.82
TSKU-204ENST00000533752 RTKN2Q8IZC4 609 aa20.2■□□□□ 0.82
TSKU-204ENST00000533752 DNAAF4Q8WXU2 420 aa20.2■□□□□ 0.82
TSKU-204ENST00000533752 FER1L6Q2WGJ9 1857 aa20.2■□□□□ 0.82
TSKU-204ENST00000533752 IRS4O14654 1257 aaPredicted RBP20.19■□□□□ 0.82
TSKU-204ENST00000533752 DDX46Q7L014 1031 aaKnown RBP20.19■□□□□ 0.82
TSKU-204ENST00000533752 SYNE4Q8N205 404 aa20.19■□□□□ 0.82
TSKU-204ENST00000533752 TMX4Q9H1E5 349 aaPredicted RBP20.19■□□□□ 0.82
TSKU-204ENST00000533752 DDX60Q8IY21 1712 aaKnown RBP20.19■□□□□ 0.82
TSKU-204ENST00000533752 PPEF1O14829 653 aaPredicted RBP20.18■□□□□ 0.82
TSKU-204ENST00000533752 TRMT2AQ8IZ69 625 aaKnown RBP20.18■□□□□ 0.82
TSKU-204ENST00000533752 CDCA7LQ96GN5 454 aa20.18■□□□□ 0.82
TSKU-204ENST00000533752 NEURL1BA8MQ27 555 aa20.17■□□□□ 0.82
TSKU-204ENST00000533752 IGKV5-2P06315 115 aa20.17■□□□□ 0.82
TSKU-204ENST00000533752 SF3B3Q15393 1217 aaKnown RBP20.17■□□□□ 0.82
TSKU-204ENST00000533752 GPBP1L1Q9HC44 474 aaPredicted RBP20.17■□□□□ 0.82
TSKU-204ENST00000533752 ABCC4O15439 1325 aa20.17■□□□□ 0.82
TSKU-204ENST00000533752 CDHR2Q9BYE9 1310 aa20.17■□□□□ 0.82
TSKU-204ENST00000533752 SBF1O95248 1867 aa20.17■□□□□ 0.82
TSKU-204ENST00000533752 BBOX1O75936 387 aa20.16■□□□□ 0.82
TSKU-204ENST00000533752 FKBP4Q02790 459 aaKnown RBP eCLIP20.16■□□□□ 0.82
TSKU-204ENST00000533752 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
TSKU-204ENST00000533752 TMC4Q7Z404 712 aa20.16■□□□□ 0.82
TSKU-204ENST00000533752 LINS1Q8NG48 757 aa20.16■□□□□ 0.82
TSKU-204ENST00000533752 HNRNPUQ00839 825 aaKnown RBP eCLIP20.15■□□□□ 0.82
TSKU-204ENST00000533752 GRAPQ13588 217 aa20.15■□□□□ 0.82
TSKU-204ENST00000533752 GRAPLQ8TC17 118 aaPredicted RBP20.15■□□□□ 0.82
TSKU-204ENST00000533752 PDE8AO60658 829 aa20.14■□□□□ 0.81
TSKU-204ENST00000533752 CWF19L2Q2TBE0 894 aaKnown RBP20.14■□□□□ 0.81
TSKU-204ENST00000533752 ALDH1L2Q3SY69 923 aa20.14■□□□□ 0.81
TSKU-204ENST00000533752 PSMD1Q99460 953 aa20.14■□□□□ 0.81
TSKU-204ENST00000533752 ATP6V0A2Q9Y487 856 aa20.14■□□□□ 0.81
TSKU-204ENST00000533752 SNED1Q8TER0 1413 aa20.13■□□□□ 0.81
TSKU-204ENST00000533752 PTPRCP08575 1304 aa20.13■□□□□ 0.81
TSKU-204ENST00000533752 KDM2BQ8NHM5 1336 aa20.13■□□□□ 0.81
TSKU-204ENST00000533752 GCKRQ14397 625 aa20.13■□□□□ 0.81
TSKU-204ENST00000533752 CCDC152Q4G0S7 254 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms