RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 CRY2Q49AN0 593 aa11.47□□□□□ -0.57
COPB1-210ENST00000533533 SYNE4Q8N205 404 aa11.47□□□□□ -0.57
COPB1-210ENST00000533533 KDM3BQ7LBC6 1761 aa11.46□□□□□ -0.57
COPB1-210ENST00000533533 RNF123Q5XPI4 1314 aa11.46□□□□□ -0.57
COPB1-210ENST00000533533 ERVV-1B6SEH8 477 aa11.46□□□□□ -0.57
COPB1-210ENST00000533533 FOXN1O15353 648 aa11.46□□□□□ -0.57
COPB1-210ENST00000533533 VEGFBP49765 207 aa11.46□□□□□ -0.57
COPB1-210ENST00000533533 SAMD1Q6SPF0 538 aaPredicted RBP11.46□□□□□ -0.57
COPB1-210ENST00000533533 PNMA8AQ86V59 439 aaPredicted RBP11.46□□□□□ -0.57
COPB1-210ENST00000533533 GPC2Q8N158 579 aa11.46□□□□□ -0.57
COPB1-210ENST00000533533 PSMD1Q99460 953 aa11.46□□□□□ -0.57
COPB1-210ENST00000533533 NYXQ9GZU5 481 aa11.46□□□□□ -0.57
COPB1-210ENST00000533533 CLEC11AQ9Y240 323 aa11.46□□□□□ -0.57
COPB1-210ENST00000533533 SNED1Q8TER0 1413 aa11.45□□□□□ -0.58
COPB1-210ENST00000533533 ABCC12Q96J65 1359 aa11.45□□□□□ -0.58
COPB1-210ENST00000533533 MAPK8IP3Q9UPT6 1336 aa11.45□□□□□ -0.58
COPB1-210ENST00000533533 NUTM1Q86Y26 1132 aa11.45□□□□□ -0.58
COPB1-210ENST00000533533 NGEFQ8N5V2 710 aa11.45□□□□□ -0.58
COPB1-210ENST00000533533 PNISRQ8TF01 805 aaKnown RBP11.45□□□□□ -0.58
COPB1-210ENST00000533533 JDP2Q8WYK2 163 aa11.45□□□□□ -0.58
COPB1-210ENST00000533533 MAP3K15Q6ZN16 1313 aa11.44□□□□□ -0.58
COPB1-210ENST00000533533 HOXA10P31260 410 aaPredicted RBP11.44□□□□□ -0.58
COPB1-210ENST00000533533 CC2D2BQ6DHV5 1058 aa11.44□□□□□ -0.58
COPB1-210ENST00000533533 TTLL7Q6ZT98 887 aa11.44□□□□□ -0.58
COPB1-210ENST00000533533 CNTROBQ8N137 903 aa11.44□□□□□ -0.58
COPB1-210ENST00000533533 AIDAQ96BJ3 306 aa11.44□□□□□ -0.58
COPB1-210ENST00000533533 PNNQ9H307 717 aaKnown RBP11.44□□□□□ -0.58
COPB1-210ENST00000533533 PRDM10Q9NQV6 1147 aa11.44□□□□□ -0.58
COPB1-210ENST00000533533 RRP7AQ9Y3A4 280 aaKnown RBP11.44□□□□□ -0.58
COPB1-210ENST00000533533 RASSF10A6NK89 507 aa11.43□□□□□ -0.58
COPB1-210ENST00000533533 CTCFP49711 727 aaPredicted RBP11.43□□□□□ -0.58
COPB1-210ENST00000533533 EIF6P56537 245 aaKnown RBP11.43□□□□□ -0.58
COPB1-210ENST00000533533 EIF4A1P60842 406 aaKnown RBP11.43□□□□□ -0.58
COPB1-210ENST00000533533 MAP1SQ66K74 1059 aaPredicted RBP11.43□□□□□ -0.58
COPB1-210ENST00000533533 KIF6Q6ZMV9 814 aa11.43□□□□□ -0.58
COPB1-210ENST00000533533 RPGRQ92834 1020 aaKnown RBP11.43□□□□□ -0.58
COPB1-210ENST00000533533 WBP1LQ9NX94 342 aa11.43□□□□□ -0.58
COPB1-210ENST00000533533 RIC1Q4ADV7 1423 aa11.43□□□□□ -0.58
COPB1-210ENST00000533533 COL4A5P29400 1685 aa11.43□□□□□ -0.58
COPB1-210ENST00000533533 TRPM7Q96QT4 1865 aa11.42□□□□□ -0.58
COPB1-210ENST00000533533 IBTKQ9P2D0 1353 aaPredicted RBP11.42□□□□□ -0.58
COPB1-210ENST00000533533 UBN2Q6ZU65 1347 aa11.42□□□□□ -0.58
COPB1-210ENST00000533533 MYL6BP14649 208 aa11.42□□□□□ -0.58
COPB1-210ENST00000533533 GPTP24298 496 aa11.42□□□□□ -0.58
COPB1-210ENST00000533533 DEFB115Q30KQ5 88 aa11.42□□□□□ -0.58
COPB1-210ENST00000533533 GRIPAP1Q4V328 841 aa11.42□□□□□ -0.58
COPB1-210ENST00000533533 SUSD4Q5VX71 490 aa11.42□□□□□ -0.58
COPB1-210ENST00000533533 CCDC146Q8IYE0 955 aa11.42□□□□□ -0.58
COPB1-210ENST00000533533 PLEKHF1Q96S99 279 aa11.42□□□□□ -0.58
COPB1-210ENST00000533533 GJA3Q9Y6H8 435 aa11.42□□□□□ -0.58
COPB1-210ENST00000533533 LTBP1Q14766 1721 aa11.41□□□□□ -0.58
COPB1-210ENST00000533533 LMOD1P29536 600 aaPredicted RBP11.41□□□□□ -0.58
COPB1-210ENST00000533533 NFE2L2Q16236 605 aa11.41□□□□□ -0.58
COPB1-210ENST00000533533 ZNF34Q8IZ26 560 aa11.41□□□□□ -0.58
COPB1-210ENST00000533533 LARGE2Q8N3Y3 721 aa11.41□□□□□ -0.58
COPB1-210ENST00000533533 RBM17Q96I25 401 aaKnown RBP11.41□□□□□ -0.58
COPB1-210ENST00000533533 CRAMP1Q96RY5 1269 aa11.41□□□□□ -0.58
COPB1-210ENST00000533533 THUMPD2Q9BTF0 503 aaKnown RBP11.41□□□□□ -0.58
COPB1-210ENST00000533533 ZBTB3Q9H5J0 574 aa11.41□□□□□ -0.58
COPB1-210ENST00000533533 MRS2Q9HD23 443 aa11.41□□□□□ -0.58
COPB1-210ENST00000533533 NTSR2O95665 410 aa11.4□□□□□ -0.58
COPB1-210ENST00000533533 SCNN1DP51172 638 aa11.4□□□□□ -0.58
COPB1-210ENST00000533533 LBX1P52954 281 aa11.4□□□□□ -0.58
COPB1-210ENST00000533533 GIGYF2Q6Y7W6 1299 aaKnown RBP11.4□□□□□ -0.58
COPB1-210ENST00000533533 DDX21Q9NR30 783 aaKnown RBP eCLIP11.4□□□□□ -0.58
COPB1-210ENST00000533533 ABT1Q9ULW3 272 aaKnown RBP11.4□□□□□ -0.58
COPB1-210ENST00000533533 ADAMTS8Q9UP79 889 aa11.4□□□□□ -0.58
COPB1-210ENST00000533533 ERBB4Q15303 1308 aa11.39□□□□□ -0.59
COPB1-210ENST00000533533 WDR33Q9C0J8 1336 aaKnown RBP11.39□□□□□ -0.59
COPB1-210ENST00000533533 TCERG1O14776 1098 aaKnown RBP11.39□□□□□ -0.59
COPB1-210ENST00000533533 PPEF1O14829 653 aaPredicted RBP11.39□□□□□ -0.59
COPB1-210ENST00000533533 EPS15P42566 896 aa11.39□□□□□ -0.59
COPB1-210ENST00000533533 MAP2K1Q02750 393 aaPredicted RBP11.39□□□□□ -0.59
COPB1-210ENST00000533533 NEUROD2Q15784 382 aa11.39□□□□□ -0.59
COPB1-210ENST00000533533 CCDC184Q52MB2 194 aa11.39□□□□□ -0.59
COPB1-210ENST00000533533 PARP10Q53GL7 1025 aa11.39□□□□□ -0.59
COPB1-210ENST00000533533 C3orf67Q6ZVT6 689 aa11.39□□□□□ -0.59
COPB1-210ENST00000533533 PPP1R42Q7Z4L9 355 aa11.39□□□□□ -0.59
COPB1-210ENST00000533533 SLC51AQ86UW1 340 aa11.39□□□□□ -0.59
COPB1-210ENST00000533533 USP50Q70EL3 339 aaPredicted RBP11.38□□□□□ -0.59
COPB1-210ENST00000533533 NIM1KQ8IY84 436 aa11.38□□□□□ -0.59
COPB1-210ENST00000533533 NLRP3Q96P20 1036 aa11.38□□□□□ -0.59
COPB1-210ENST00000533533 PPIP5K2O43314 1243 aa11.37□□□□□ -0.59
COPB1-210ENST00000533533 HSPA8P11142 646 aaKnown RBP11.37□□□□□ -0.59
COPB1-210ENST00000533533 RIPK4P57078 832 aa11.37□□□□□ -0.59
COPB1-210ENST00000533533 FMR1Q06787 632 aaKnown RBP eCLIP11.37□□□□□ -0.595e-7■■■■■ 33.6
COPB1-210ENST00000533533 PDIA6Q15084 440 aa11.37□□□□□ -0.59
COPB1-210ENST00000533533 SLC10A5Q5PT55 438 aa11.37□□□□□ -0.59
COPB1-210ENST00000533533 LRP10Q7Z4F1 713 aa11.37□□□□□ -0.59
COPB1-210ENST00000533533 RUNDC1Q96C34 613 aa11.37□□□□□ -0.59
COPB1-210ENST00000533533 TMX4Q9H1E5 349 aaPredicted RBP11.37□□□□□ -0.59
COPB1-210ENST00000533533 VPS33BQ9H267 617 aa11.37□□□□□ -0.59
COPB1-210ENST00000533533 ATP6V0A2Q9Y487 856 aa11.37□□□□□ -0.59
COPB1-210ENST00000533533 LAMB2P55268 1798 aa11.36□□□□□ -0.59
COPB1-210ENST00000533533 ANKRD36CQ5JPF3 1778 aa11.36□□□□□ -0.59
COPB1-210ENST00000533533 MYCNP04198 464 aaPredicted RBP11.36□□□□□ -0.59
COPB1-210ENST00000533533 EIF2S2P20042 333 aaKnown RBP11.36□□□□□ -0.59
COPB1-210ENST00000533533 AOC3Q16853 763 aa11.36□□□□□ -0.59
COPB1-210ENST00000533533 CAPNS2Q96L46 248 aa11.36□□□□□ -0.59
COPB1-210ENST00000533533 UTP14AQ9BVJ6 771 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms