RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 GRIN3BO60391 1043 aa26.74■■□□□ 1.87
VPS51-211ENST00000533487 BRPF1P55201 1214 aaPredicted RBP26.74■■□□□ 1.87
VPS51-211ENST00000533487 SLC10A5Q5PT55 438 aa26.74■■□□□ 1.87
VPS51-211ENST00000533487 G2E3Q7L622 706 aa26.74■■□□□ 1.87
VPS51-211ENST00000533487 PTPRCP08575 1304 aa26.73■■□□□ 1.87
VPS51-211ENST00000533487 A0A0G2JLW4 131 aa26.73■■□□□ 1.87
VPS51-211ENST00000533487 KCNA3P22001 575 aa26.73■■□□□ 1.87
VPS51-211ENST00000533487 GPR162Q16538 588 aa26.73■■□□□ 1.87
VPS51-211ENST00000533487 SH3TC1Q8TE82 1336 aa26.72■■□□□ 1.87
VPS51-211ENST00000533487 C2CD5Q86YS7 1000 aa26.72■■□□□ 1.87
VPS51-211ENST00000533487 TRMT112Q9UI30 125 aaKnown RBP26.72■■□□□ 1.87
VPS51-211ENST00000533487 FAM177BA6PVY3 158 aa26.71■■□□□ 1.87
VPS51-211ENST00000533487 STYK1Q6J9G0 422 aa26.71■■□□□ 1.87
VPS51-211ENST00000533487 MRPL50Q8N5N7 158 aaKnown RBP26.71■■□□□ 1.87
VPS51-211ENST00000533487 DNAAF4Q8WXU2 420 aa26.71■■□□□ 1.87
VPS51-211ENST00000533487 MYD88Q99836 296 aa26.71■■□□□ 1.87
VPS51-211ENST00000533487 ERFEQ4G0M1 354 aa26.7■■□□□ 1.86
VPS51-211ENST00000533487 SSH1Q8WYL5 1049 aa26.7■■□□□ 1.86
VPS51-211ENST00000533487 MASTLQ96GX5 879 aa26.7■■□□□ 1.86
VPS51-211ENST00000533487 CWC25Q9NXE8 425 aaPredicted RBP26.7■■□□□ 1.86
VPS51-211ENST00000533487 COL11A2P13942 1736 aaPredicted RBP26.7■■□□□ 1.86
VPS51-211ENST00000533487 LAMB2P55268 1798 aa26.69■■□□□ 1.86
VPS51-211ENST00000533487 SRGNP10124 158 aa26.69■■□□□ 1.86
VPS51-211ENST00000533487 DALRD3Q5D0E6 543 aaKnown RBP26.69■■□□□ 1.86
VPS51-211ENST00000533487 CNKSR1Q969H4 720 aa26.69■■□□□ 1.86
VPS51-211ENST00000533487 ATP5J2-PTCD1G3V325 749 aa26.68■■□□□ 1.86
VPS51-211ENST00000533487 NPR1P16066 1061 aa26.68■■□□□ 1.86
VPS51-211ENST00000533487 CHRNA5P30532 468 aa26.68■■□□□ 1.86
VPS51-211ENST00000533487 CRY2Q49AN0 593 aa26.68■■□□□ 1.86
VPS51-211ENST00000533487 NUTM1Q86Y26 1132 aa26.68■■□□□ 1.86
VPS51-211ENST00000533487 TTLL6Q8N841 843 aa26.68■■□□□ 1.86
VPS51-211ENST00000533487 ZBTB38Q8NAP3 1195 aaPredicted RBP26.68■■□□□ 1.86
VPS51-211ENST00000533487 LINS1Q8NG48 757 aa26.68■■□□□ 1.86
VPS51-211ENST00000533487 NLRP3Q96P20 1036 aa26.68■■□□□ 1.86
VPS51-211ENST00000533487 SMC4Q9NTJ3 1288 aa26.67■■□□□ 1.86
VPS51-211ENST00000533487 ABCC12Q96J65 1359 aa26.67■■□□□ 1.86
VPS51-211ENST00000533487 PCCAP05165 728 aaPredicted RBP26.66■■□□□ 1.86
VPS51-211ENST00000533487 ALDH1B1P30837 517 aa26.66■■□□□ 1.86
VPS51-211ENST00000533487 CHD4Q14839 1912 aa26.65■■□□□ 1.86
VPS51-211ENST00000533487 RARSP54136 660 aaKnown RBP26.65■■□□□ 1.86
VPS51-211ENST00000533487 CCDC24Q8N4L8 307 aa26.65■■□□□ 1.86
VPS51-211ENST00000533487 TNRC6CQ9HCJ0 1690 aaKnown RBP26.65■■□□□ 1.86
VPS51-211ENST00000533487 KIF16BQ96L93 1317 aa26.65■■□□□ 1.86
VPS51-211ENST00000533487 NEURL1BA8MQ27 555 aa26.64■■□□□ 1.86
VPS51-211ENST00000533487 IGKV5-2P06315 115 aa26.64■■□□□ 1.86
VPS51-211ENST00000533487 PELP1Q8IZL8 1130 aaKnown RBP26.64■■□□□ 1.86
VPS51-211ENST00000533487 BCS1LQ9Y276 419 aa26.64■■□□□ 1.86
VPS51-211ENST00000533487 DDX60Q8IY21 1712 aaKnown RBP26.64■■□□□ 1.85
VPS51-211ENST00000533487 YBX3P16989 372 aaKnown RBP eCLIP26.63■■□□□ 1.857e-7■■■■□ 20.4
VPS51-211ENST00000533487 HOXA10P31260 410 aaPredicted RBP26.63■■□□□ 1.85
VPS51-211ENST00000533487 ZNF622Q969S3 477 aaKnown RBP eCLIP26.63■■□□□ 1.85
VPS51-211ENST00000533487 CDHR2Q9BYE9 1310 aa26.63■■□□□ 1.85
VPS51-211ENST00000533487 ARHGAP45Q92619 1136 aa26.62■■□□□ 1.85
VPS51-211ENST00000533487 RPGRQ92834 1020 aaKnown RBP26.62■■□□□ 1.85
VPS51-211ENST00000533487 ALDH1L1O75891 902 aa26.61■■□□□ 1.85
VPS51-211ENST00000533487 SOGA3Q5TF21 947 aa26.61■■□□□ 1.85
VPS51-211ENST00000533487 FAM89AQ96GI7 184 aa26.61■■□□□ 1.85
VPS51-211ENST00000533487 GCKRQ14397 625 aa26.6■■□□□ 1.85
VPS51-211ENST00000533487 BEND3Q5T5X7 828 aa26.6■■□□□ 1.85
VPS51-211ENST00000533487 RBM17Q96I25 401 aaKnown RBP26.6■■□□□ 1.85
VPS51-211ENST00000533487 CRAMP1Q96RY5 1269 aa26.6■■□□□ 1.85
VPS51-211ENST00000533487 MYH3P11055 1940 aa26.59■■□□□ 1.85
VPS51-211ENST00000533487 IRS4O14654 1257 aaPredicted RBP26.59■■□□□ 1.85
VPS51-211ENST00000533487 API5Q9BZZ5 524 aaKnown RBP26.59■■□□□ 1.85
VPS51-211ENST00000533487 CACNA1SQ13698 1873 aa26.58■■□□□ 1.85
VPS51-211ENST00000533487 IPO8O15397 1037 aaKnown RBP26.58■■□□□ 1.85
VPS51-211ENST00000533487 SF3B3Q15393 1217 aaKnown RBP26.58■■□□□ 1.85
VPS51-211ENST00000533487 CWF19L2Q2TBE0 894 aaKnown RBP26.58■■□□□ 1.85
VPS51-211ENST00000533487 F6X3S4 739 aa26.57■■□□□ 1.84
VPS51-211ENST00000533487 H7C1W4 665 aa26.57■■□□□ 1.84
VPS51-211ENST00000533487 GRIPAP1Q4V328 841 aa26.57■■□□□ 1.84
VPS51-211ENST00000533487 BCL2L13Q9BXK5 485 aa26.57■■□□□ 1.84
VPS51-211ENST00000533487 SRCIN1Q9C0H9 1055 aa26.57■■□□□ 1.84
VPS51-211ENST00000533487 SLX4Q8IY92 1834 aa26.56■■□□□ 1.84
VPS51-211ENST00000533487 PDE8AO60658 829 aa26.56■■□□□ 1.84
VPS51-211ENST00000533487 HCLS1P14317 486 aaPredicted RBP26.56■■□□□ 1.84
VPS51-211ENST00000533487 PRPF40BQ6NWY9 871 aaKnown RBP26.56■■□□□ 1.84
VPS51-211ENST00000533487 CC2D2BQ6DHV5 1058 aa26.55■■□□□ 1.84
VPS51-211ENST00000533487 DDX46Q7L014 1031 aaKnown RBP26.54■■□□□ 1.84
VPS51-211ENST00000533487 TMC4Q7Z404 712 aa26.54■■□□□ 1.84
VPS51-211ENST00000533487 SYNE4Q8N205 404 aa26.54■■□□□ 1.84
VPS51-211ENST00000533487 PLA2G12BQ9BX93 195 aa26.54■■□□□ 1.84
VPS51-211ENST00000533487 SLC4A10Q6U841 1118 aa26.53■■□□□ 1.84
VPS51-211ENST00000533487 NOB1Q9ULX3 412 aaKnown RBP26.53■■□□□ 1.84
VPS51-211ENST00000533487 BBOX1O75936 387 aa26.52■■□□□ 1.84
VPS51-211ENST00000533487 CCT4P50991 539 aaKnown RBP26.52■■□□□ 1.84
VPS51-211ENST00000533487 FER1L6Q2WGJ9 1857 aa26.52■■□□□ 1.84
VPS51-211ENST00000533487 CCDC152Q4G0S7 254 aa26.51■■□□□ 1.83
VPS51-211ENST00000533487 UBE3BQ7Z3V4 1068 aa26.51■■□□□ 1.83
VPS51-211ENST00000533487 WWC3Q9ULE0 1092 aa26.51■■□□□ 1.83
VPS51-211ENST00000533487 GRM8O00222 908 aa26.5■■□□□ 1.83
VPS51-211ENST00000533487 ARHGAP27Q6ZUM4 889 aa26.5■■□□□ 1.83
VPS51-211ENST00000533487 C3orf67Q6ZVT6 689 aa26.5■■□□□ 1.83
VPS51-211ENST00000533487 C7orf43Q8WVR3 580 aa26.5■■□□□ 1.83
VPS51-211ENST00000533487 TMX4Q9H1E5 349 aaPredicted RBP26.5■■□□□ 1.83
VPS51-211ENST00000533487 C9orf78Q9NZ63 289 aaPredicted RBP26.5■■□□□ 1.83
VPS51-211ENST00000533487 RTL9Q8NET4 1388 aa26.49■■□□□ 1.83
VPS51-211ENST00000533487 CASP7P55210 303 aa26.49■■□□□ 1.83
VPS51-211ENST00000533487 RTL5Q5HYW3 569 aaPredicted RBP26.49■■□□□ 1.83
VPS51-211ENST00000533487 UTYO14607 1347 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms