RNA–Protein interactions for RNA: ENST00000533316.1

ATG13-220, Transcript of autophagy related 13, humanhuman

TSL 2

Gene ATG13, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-220ENST00000533316 C3orf67Q6ZVT6 689 aa13.58□□□□□ -0.24
ATG13-220ENST00000533316 PNMA8AQ86V59 439 aaPredicted RBP13.58□□□□□ -0.24
ATG13-220ENST00000533316 GPC2Q8N158 579 aa13.58□□□□□ -0.24
ATG13-220ENST00000533316 RTF1Q92541 710 aaKnown RBP13.58□□□□□ -0.24
ATG13-220ENST00000533316 SNED1Q8TER0 1413 aa13.57□□□□□ -0.24
ATG13-220ENST00000533316 CCDC85CA6NKD9 419 aa13.57□□□□□ -0.24
ATG13-220ENST00000533316 AOC2O75106 756 aa13.57□□□□□ -0.24
ATG13-220ENST00000533316 ALDH1B1P30837 517 aa13.57□□□□□ -0.24
ATG13-220ENST00000533316 SCNN1DP51172 638 aa13.57□□□□□ -0.24
ATG13-220ENST00000533316 EIF6P56537 245 aaKnown RBP13.57□□□□□ -0.24
ATG13-220ENST00000533316 JDP2Q8WYK2 163 aa13.57□□□□□ -0.24
ATG13-220ENST00000533316 CAPNS2Q96L46 248 aa13.57□□□□□ -0.24
ATG13-220ENST00000533316 CST9Q5W186 159 aa13.56□□□□□ -0.24
ATG13-220ENST00000533316 LARGE2Q8N3Y3 721 aa13.56□□□□□ -0.24
ATG13-220ENST00000533316 RRP7AQ9Y3A4 280 aaKnown RBP13.56□□□□□ -0.24
ATG13-220ENST00000533316 MYL6BP14649 208 aa13.55□□□□□ -0.24
ATG13-220ENST00000533316 LMOD1P29536 600 aaPredicted RBP13.55□□□□□ -0.24
ATG13-220ENST00000533316 MAP2K1Q02750 393 aaPredicted RBP13.55□□□□□ -0.24
ATG13-220ENST00000533316 CRY2Q49AN0 593 aa13.55□□□□□ -0.24
ATG13-220ENST00000533316 SUSD4Q5VX71 490 aa13.55□□□□□ -0.24
ATG13-220ENST00000533316 PSMD1Q99460 953 aa13.55□□□□□ -0.24
ATG13-220ENST00000533316 ZBTB3Q9H5J0 574 aa13.55□□□□□ -0.24
ATG13-220ENST00000533316 UBN2Q6ZU65 1347 aa13.55□□□□□ -0.24
ATG13-220ENST00000533316 RPGRQ92834 1020 aaKnown RBP13.54□□□□□ -0.24
ATG13-220ENST00000533316 CFAP53Q96M91 514 aa13.54□□□□□ -0.24
ATG13-220ENST00000533316 GPR101Q96P66 508 aaPredicted RBP13.54□□□□□ -0.24
ATG13-220ENST00000533316 THUMPD2Q9BTF0 503 aaKnown RBP13.54□□□□□ -0.24
ATG13-220ENST00000533316 PPEF1O14829 653 aaPredicted RBP13.53□□□□□ -0.24
ATG13-220ENST00000533316 TAF7Q15545 349 aaPredicted RBP13.53□□□□□ -0.24
ATG13-220ENST00000533316 AOC3Q16853 763 aa13.53□□□□□ -0.24
ATG13-220ENST00000533316 ZNF428Q96B54 188 aa13.53□□□□□ -0.24
ATG13-220ENST00000533316 NPC1L1Q9UHC9 1359 aa13.53□□□□□ -0.24
ATG13-220ENST00000533316 NUP98P52948 1817 aa13.53□□□□□ -0.24
ATG13-220ENST00000533316 PPP2R1AP30153 589 aa13.52□□□□□ -0.25
ATG13-220ENST00000533316 DLK2Q6UY11 383 aa13.52□□□□□ -0.25
ATG13-220ENST00000533316 GLIS2Q9BZE0 524 aaPredicted RBP13.52□□□□□ -0.25
ATG13-220ENST00000533316 NUDCQ9Y266 331 aa13.52□□□□□ -0.25
ATG13-220ENST00000533316 MAP3K15Q6ZN16 1313 aa13.52□□□□□ -0.25
ATG13-220ENST00000533316 SHTN1A0MZ66 631 aa13.51□□□□□ -0.25
ATG13-220ENST00000533316 PPIP5K2O43314 1243 aa13.51□□□□□ -0.25
ATG13-220ENST00000533316 SLC34A2O95436 690 aa13.51□□□□□ -0.25
ATG13-220ENST00000533316 HOXA10P31260 410 aaPredicted RBP13.51□□□□□ -0.25
ATG13-220ENST00000533316 NIM1KQ8IY84 436 aa13.51□□□□□ -0.25
ATG13-220ENST00000533316 CFAP44Q96MT7 982 aa13.51□□□□□ -0.25
ATG13-220ENST00000533316 NYXQ9GZU5 481 aa13.51□□□□□ -0.25
ATG13-220ENST00000533316 CELF2O95319 508 aaKnown RBP13.5□□□□□ -0.25
ATG13-220ENST00000533316 NTSR2O95665 410 aa13.5□□□□□ -0.25
ATG13-220ENST00000533316 EIF4A1P60842 406 aaKnown RBP13.5□□□□□ -0.25
ATG13-220ENST00000533316 KIF6Q6ZMV9 814 aa13.5□□□□□ -0.25
ATG13-220ENST00000533316 USP50Q70EL3 339 aaPredicted RBP13.5□□□□□ -0.25
ATG13-220ENST00000533316 RBM17Q96I25 401 aaKnown RBP13.5□□□□□ -0.25
ATG13-220ENST00000533316 ZIC5Q96T25 663 aa13.5□□□□□ -0.25
ATG13-220ENST00000533316 BEGAINQ9BUH8 593 aa13.5□□□□□ -0.25
ATG13-220ENST00000533316 ZNF408Q9H9D4 720 aa13.5□□□□□ -0.25
ATG13-220ENST00000533316 TLL2Q9Y6L7 1015 aa13.5□□□□□ -0.25
ATG13-220ENST00000533316 CASP8AP2Q9UKL3 1982 aa13.49□□□□□ -0.25
ATG13-220ENST00000533316 TRPM7Q96QT4 1865 aa13.49□□□□□ -0.25
ATG13-220ENST00000533316 ERVV-1B6SEH8 477 aa13.49□□□□□ -0.25
ATG13-220ENST00000533316 RGL2O15211 777 aa13.49□□□□□ -0.25
ATG13-220ENST00000533316 ANXA1P04083 346 aa13.49□□□□□ -0.25
ATG13-220ENST00000533316 ECE1P42892 770 aa13.49□□□□□ -0.25
ATG13-220ENST00000533316 GMPSP49915 693 aaPredicted RBP13.49□□□□□ -0.25
ATG13-220ENST00000533316 CXCL9Q07325 125 aa13.49□□□□□ -0.25
ATG13-220ENST00000533316 CC2D2BQ6DHV5 1058 aa13.49□□□□□ -0.25
ATG13-220ENST00000533316 ZNF34Q8IZ26 560 aa13.49□□□□□ -0.25
ATG13-220ENST00000533316 CRAMP1Q96RY5 1269 aa13.49□□□□□ -0.25
ATG13-220ENST00000533316 GPRC5DQ9NZD1 345 aa13.49□□□□□ -0.25
ATG13-220ENST00000533316 LAMB4A4D0S4 1761 aa13.48□□□□□ -0.25
ATG13-220ENST00000533316 HTATSF1O43719 755 aaKnown RBP13.48□□□□□ -0.25
ATG13-220ENST00000533316 RAD17O75943 681 aa13.48□□□□□ -0.25
ATG13-220ENST00000533316 HIRAP54198 1017 aaPredicted RBP13.48□□□□□ -0.25
ATG13-220ENST00000533316 MLLT1Q03111 559 aaPredicted RBP13.48□□□□□ -0.25
ATG13-220ENST00000533316 MCOLN1Q9GZU1 580 aa13.48□□□□□ -0.25
ATG13-220ENST00000533316 THSD7BQ9C0I4 1608 aa13.48□□□□□ -0.25
ATG13-220ENST00000533316 RIC1Q4ADV7 1423 aa13.47□□□□□ -0.25
ATG13-220ENST00000533316 ABCC4O15439 1325 aa13.47□□□□□ -0.25
ATG13-220ENST00000533316 PROSER3Q2NL68 480 aa13.47□□□□□ -0.25
ATG13-220ENST00000533316 SAPCD2Q86UD0 394 aa13.47□□□□□ -0.25
ATG13-220ENST00000533316 TRPM4Q8TD43 1214 aa13.47□□□□□ -0.25
ATG13-220ENST00000533316 ADARB2Q9NS39 739 aaKnown RBP13.47□□□□□ -0.25
ATG13-220ENST00000533316 KDM3BQ7LBC6 1761 aa13.46□□□□□ -0.25
ATG13-220ENST00000533316 HCLS1P14317 486 aaPredicted RBP13.46□□□□□ -0.25
ATG13-220ENST00000533316 EIF2S2P20042 333 aaKnown RBP13.46□□□□□ -0.25
ATG13-220ENST00000533316 CIAPIN1Q6FI81 312 aa13.46□□□□□ -0.25
ATG13-220ENST00000533316 NECTIN2Q92692 538 aa13.46□□□□□ -0.25
ATG13-220ENST00000533316 ATP6V0A2Q9Y487 856 aa13.46□□□□□ -0.25
ATG13-220ENST00000533316 DLG5Q8TDM6 1919 aa13.46□□□□□ -0.25
ATG13-220ENST00000533316 GIGYF2Q6Y7W6 1299 aaKnown RBP13.45□□□□□ -0.26
ATG13-220ENST00000533316 NLRP3Q96P20 1036 aa13.45□□□□□ -0.26
ATG13-220ENST00000533316 ZNRF3Q9ULT6 936 aa13.45□□□□□ -0.26
ATG13-220ENST00000533316 TAF1P21675 1872 aa13.44□□□□□ -0.26
ATG13-220ENST00000533316 MAP2K2P36507 400 aa13.44□□□□□ -0.26
ATG13-220ENST00000533316 RGS19P49795 217 aa13.44□□□□□ -0.26
ATG13-220ENST00000533316 PDIA6Q15084 440 aa13.44□□□□□ -0.26
ATG13-220ENST00000533316 DPP8Q6V1X1 898 aaPredicted RBP13.44□□□□□ -0.26
ATG13-220ENST00000533316 USP48Q86UV5 1035 aa13.44□□□□□ -0.26
ATG13-220ENST00000533316 UTP14AQ9BVJ6 771 aaKnown RBP13.44□□□□□ -0.26
ATG13-220ENST00000533316 BCL2L13Q9BXK5 485 aa13.44□□□□□ -0.26
ATG13-220ENST00000533316 ZBTB12Q9Y330 459 aaPredicted RBP13.44□□□□□ -0.26
ATG13-220ENST00000533316 YDJCA8MPS7 323 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms