RNA–Protein interactions for RNA: ENST00000533124.5

C11orf49-220, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 4

Gene C11orf49, Length 559 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-220ENST00000533124 SNED1Q8TER0 1413 aa17.06■□□□□ 0.32
C11orf49-220ENST00000533124 PPP1R42Q7Z4L9 355 aa17.06■□□□□ 0.32
C11orf49-220ENST00000533124 RPGRQ92834 1020 aaKnown RBP17.06■□□□□ 0.32
C11orf49-220ENST00000533124 LAS1LQ9Y4W2 734 aaKnown RBP17.06■□□□□ 0.32
C11orf49-220ENST00000533124 HOXA10P31260 410 aaPredicted RBP17.05■□□□□ 0.32
C11orf49-220ENST00000533124 KRT24Q2M2I5 525 aa17.05■□□□□ 0.32
C11orf49-220ENST00000533124 PARP10Q53GL7 1025 aa17.05■□□□□ 0.32
C11orf49-220ENST00000533124 KLRG1Q96E93 195 aa17.05■□□□□ 0.32
C11orf49-220ENST00000533124 COPS6Q7L5N1 327 aa17.04■□□□□ 0.32
C11orf49-220ENST00000533124 SYNE4Q8N205 404 aa17.04■□□□□ 0.32
C11orf49-220ENST00000533124 ZNF541Q9H0D2 1346 aa17.03■□□□□ 0.32
C11orf49-220ENST00000533124 IARSP41252 1262 aaKnown RBP17.03■□□□□ 0.32
C11orf49-220ENST00000533124 AIMP1Q12904 312 aaKnown RBP17.03■□□□□ 0.32
C11orf49-220ENST00000533124 C3orf67Q6ZVT6 689 aa17.03■□□□□ 0.32
C11orf49-220ENST00000533124 XAGE3Q8WTP9 111 aa17.03■□□□□ 0.32
C11orf49-220ENST00000533124 RBM17Q96I25 401 aaKnown RBP17.03■□□□□ 0.32
C11orf49-220ENST00000533124 DDX21Q9NR30 783 aaKnown RBP eCLIP17.03■□□□□ 0.32
C11orf49-220ENST00000533124 TAF1P21675 1872 aa17.03■□□□□ 0.32
C11orf49-220ENST00000533124 CC2D2BQ6DHV5 1058 aa17.02■□□□□ 0.32
C11orf49-220ENST00000533124 L3MBTL3Q96JM7 780 aaPredicted RBP17.02■□□□□ 0.32
C11orf49-220ENST00000533124 CRAMP1Q96RY5 1269 aa17.02■□□□□ 0.32
C11orf49-220ENST00000533124 PSMD1Q99460 953 aa17.02■□□□□ 0.32
C11orf49-220ENST00000533124 UTP14AQ9BVJ6 771 aaKnown RBP17.02■□□□□ 0.32
C11orf49-220ENST00000533124 IQCA1LA6NCM1 817 aa17.01■□□□□ 0.31
C11orf49-220ENST00000533124 POTEIP0CG38 1075 aa17.01■□□□□ 0.31
C11orf49-220ENST00000533124 POTEJP0CG39 1038 aa17.01■□□□□ 0.31
C11orf49-220ENST00000533124 HSP90AB3PQ58FF7 597 aa17.01■□□□□ 0.31
C11orf49-220ENST00000533124 NLRP3Q96P20 1036 aa17.01■□□□□ 0.31
C11orf49-220ENST00000533124 CHPF2Q9P2E5 772 aa17.01■□□□□ 0.31
C11orf49-220ENST00000533124 COL4A5P29400 1685 aa17.01■□□□□ 0.31
C11orf49-220ENST00000533124 FZD9O00144 591 aa17■□□□□ 0.31
C11orf49-220ENST00000533124 PPEF1O14829 653 aaPredicted RBP17■□□□□ 0.31
C11orf49-220ENST00000533124 HOXB7P09629 217 aa17■□□□□ 0.31
C11orf49-220ENST00000533124 SLC10A5Q5PT55 438 aa17■□□□□ 0.31
C11orf49-220ENST00000533124 HDGFL1Q5TGJ6 251 aa17■□□□□ 0.31
C11orf49-220ENST00000533124 CHADLQ6NUI6 762 aa17■□□□□ 0.31
C11orf49-220ENST00000533124 SLC51AQ86UW1 340 aa17■□□□□ 0.31
C11orf49-220ENST00000533124 NLRP10Q86W26 655 aa17■□□□□ 0.31
C11orf49-220ENST00000533124 JMYQ8N9B5 988 aa17■□□□□ 0.31
C11orf49-220ENST00000533124 CFAP44Q96MT7 982 aa17■□□□□ 0.31
C11orf49-220ENST00000533124 RNF123Q5XPI4 1314 aa16.99■□□□□ 0.31
C11orf49-220ENST00000533124 DDX60Q8IY21 1712 aaKnown RBP16.99■□□□□ 0.31
C11orf49-220ENST00000533124 TCIRG1Q13488 830 aa16.99■□□□□ 0.31
C11orf49-220ENST00000533124 GRIPAP1Q4V328 841 aa16.99■□□□□ 0.31
C11orf49-220ENST00000533124 TAF1DQ9H5J8 278 aaPredicted RBP16.99■□□□□ 0.31
C11orf49-220ENST00000533124 ADAMTSL1Q8N6G6 1762 aa16.98■□□□□ 0.31
C11orf49-220ENST00000533124 TCERG1O14776 1098 aaKnown RBP16.98■□□□□ 0.31
C11orf49-220ENST00000533124 IFFO2Q5TF58 517 aa16.98■□□□□ 0.31
C11orf49-220ENST00000533124 JDP2Q8WYK2 163 aa16.98■□□□□ 0.31
C11orf49-220ENST00000533124 MBIPQ9NS73 344 aa16.98■□□□□ 0.31
C11orf49-220ENST00000533124 APAF1O14727 1248 aa16.97■□□□□ 0.31
C11orf49-220ENST00000533124 HCLS1P14317 486 aaPredicted RBP16.97■□□□□ 0.31
C11orf49-220ENST00000533124 DUSP27Q5VZP5 1158 aa16.97■□□□□ 0.31
C11orf49-220ENST00000533124 LDHDQ86WU2 507 aa16.97■□□□□ 0.31
C11orf49-220ENST00000533124 DBF4Q9UBU7 674 aaPredicted RBP16.97■□□□□ 0.31
C11orf49-220ENST00000533124 HACL1Q9UJ83 578 aa16.97■□□□□ 0.31
C11orf49-220ENST00000533124 ABCC4O15439 1325 aa16.96■□□□□ 0.31
C11orf49-220ENST00000533124 ZNF853P0CG23 659 aa16.96■□□□□ 0.31
C11orf49-220ENST00000533124 GPC2Q8N158 579 aa16.96■□□□□ 0.31
C11orf49-220ENST00000533124 PLBD2Q8NHP8 589 aa16.96■□□□□ 0.31
C11orf49-220ENST00000533124 TRMT112Q9UI30 125 aaKnown RBP16.96■□□□□ 0.31
C11orf49-220ENST00000533124 ATP6V0A2Q9Y487 856 aa16.96■□□□□ 0.31
C11orf49-220ENST00000533124 LTBP1Q14766 1721 aa16.96■□□□□ 0.3
C11orf49-220ENST00000533124 SH3TC1Q8TE82 1336 aa16.96■□□□□ 0.3
C11orf49-220ENST00000533124 EIF6P56537 245 aaKnown RBP16.95■□□□□ 0.3
C11orf49-220ENST00000533124 EAPPQ56P03 285 aaPredicted RBP16.95■□□□□ 0.3
C11orf49-220ENST00000533124 ANKRD13DQ6ZTN6 518 aa16.95■□□□□ 0.3
C11orf49-220ENST00000533124 LARGE2Q8N3Y3 721 aa16.95■□□□□ 0.3
C11orf49-220ENST00000533124 ZNF428Q96B54 188 aa16.95■□□□□ 0.3
C11orf49-220ENST00000533124 TMX4Q9H1E5 349 aaPredicted RBP16.95■□□□□ 0.3
C11orf49-220ENST00000533124 EPHX2P34913 555 aa16.94■□□□□ 0.3
C11orf49-220ENST00000533124 IFT57Q9NWB7 429 aa16.94■□□□□ 0.3
C11orf49-220ENST00000533124 HYPKQ9NX55 129 aa16.94■□□□□ 0.3
C11orf49-220ENST00000533124 BBOX1O75936 387 aa16.93■□□□□ 0.3
C11orf49-220ENST00000533124 GNAI1P63096 354 aa16.93■□□□□ 0.3
C11orf49-220ENST00000533124 CALD1Q05682 793 aaKnown RBP16.93■□□□□ 0.3
C11orf49-220ENST00000533124 ISCA1Q9BUE6 129 aa16.93■□□□□ 0.3
C11orf49-220ENST00000533124 CREBZFQ9NS37 354 aa16.93■□□□□ 0.3
C11orf49-220ENST00000533124 GJA3Q9Y6H8 435 aa16.93■□□□□ 0.3
C11orf49-220ENST00000533124 PASKQ96RG2 1323 aa16.93■□□□□ 0.3
C11orf49-220ENST00000533124 LRRC37AA6NMS7 1700 aa16.93■□□□□ 0.3
C11orf49-220ENST00000533124 PPIP5K2O43314 1243 aa16.92■□□□□ 0.3
C11orf49-220ENST00000533124 AOC3Q16853 763 aa16.92■□□□□ 0.3
C11orf49-220ENST00000533124 DDX46Q7L014 1031 aaKnown RBP16.92■□□□□ 0.3
C11orf49-220ENST00000533124 PNMA8AQ86V59 439 aaPredicted RBP16.92■□□□□ 0.3
C11orf49-220ENST00000533124 NIM1KQ8IY84 436 aa16.92■□□□□ 0.3
C11orf49-220ENST00000533124 ATP5J2-PTCD1G3V325 749 aa16.91■□□□□ 0.3
C11orf49-220ENST00000533124 GRAPQ13588 217 aa16.91■□□□□ 0.3
C11orf49-220ENST00000533124 SP8Q8IXZ3 490 aa16.91■□□□□ 0.3
C11orf49-220ENST00000533124 GRAPLQ8TC17 118 aaPredicted RBP16.91■□□□□ 0.3
C11orf49-220ENST00000533124 RTFDC1Q9BY42 306 aaPredicted RBP16.91■□□□□ 0.3
C11orf49-220ENST00000533124 VPS33BQ9H267 617 aa16.91■□□□□ 0.3
C11orf49-220ENST00000533124 CLEC11AQ9Y240 323 aa16.91■□□□□ 0.3
C11orf49-220ENST00000533124 ELL2O00472 640 aaPredicted RBP16.9■□□□□ 0.3
C11orf49-220ENST00000533124 ITGBL1O95965 494 aaPredicted RBP16.9■□□□□ 0.3
C11orf49-220ENST00000533124 DPP8Q6V1X1 898 aaPredicted RBP16.9■□□□□ 0.3
C11orf49-220ENST00000533124 SUPT20HQ8NEM7 779 aa16.9■□□□□ 0.3
C11orf49-220ENST00000533124 FAM89AQ96GI7 184 aa16.9■□□□□ 0.3
C11orf49-220ENST00000533124 TRPM7Q96QT4 1865 aa16.9■□□□□ 0.3
C11orf49-220ENST00000533124 LMOD1P29536 600 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms