RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 BOLA2Q9H3K6 86 aa11.05□□□□□ -0.64
BDNF-216ENST00000532997 PHAXQ9H814 394 aaKnown RBP11.05□□□□□ -0.64
BDNF-216ENST00000532997 AMOTL2Q9Y2J4 779 aa11.05□□□□□ -0.64
BDNF-216ENST00000532997 ME1P48163 572 aa11.05□□□□□ -0.64
BDNF-216ENST00000532997 GORABQ5T7V8 394 aa11.05□□□□□ -0.64
BDNF-216ENST00000532997 LARP1Q6PKG0 1096 aaKnown RBP11.05□□□□□ -0.64
BDNF-216ENST00000532997 CPLX2Q6PUV4 134 aaKnown RBP11.05□□□□□ -0.64
BDNF-216ENST00000532997 SYNE3Q6ZMZ3 975 aa11.05□□□□□ -0.64
BDNF-216ENST00000532997 MAP3K2Q9Y2U5 619 aa11.05□□□□□ -0.64
BDNF-216ENST00000532997 ITSN1Q15811 1721 aa11.05□□□□□ -0.64
BDNF-216ENST00000532997 DHX16O60231 1041 aaKnown RBP11.04□□□□□ -0.64
BDNF-216ENST00000532997 PSME1Q06323 249 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 CEP135Q66GS9 1140 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 CLSTN2Q9H4D0 955 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 PRR36Q9H6K5 1346 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 CPLX1O14810 134 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 CPA1P15085 419 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 NMIQ13287 307 aaPredicted RBP11.04□□□□□ -0.64
BDNF-216ENST00000532997 POLA2Q14181 598 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 C17orf53Q8N3J3 647 aaPredicted RBP11.04□□□□□ -0.64
BDNF-216ENST00000532997 KCNH5Q8NCM2 988 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 CCDC8Q9H0W5 538 aaPredicted RBP11.04□□□□□ -0.64
BDNF-216ENST00000532997 SIL1Q9H173 461 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 OGFRQ9NZT2 677 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 PXDNLA1KZ92 1463 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 CEBPZQ03701 1054 aaKnown RBP11.04□□□□□ -0.64
BDNF-216ENST00000532997 STK38Q15208 465 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 KSR2Q6VAB6 950 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 FILIP1Q7Z7B0 1213 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 LUZP1Q86V48 1076 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 NEK1Q96PY6 1258 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 ZHX1Q9UKY1 873 aaPredicted RBP11.04□□□□□ -0.64
BDNF-216ENST00000532997 SIGLEC1Q9BZZ2 1709 aa11.04□□□□□ -0.64
BDNF-216ENST00000532997 HOXC9P31274 260 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 GTF2F1P35269 517 aaKnown RBP eCLIP11.03□□□□□ -0.64
BDNF-216ENST00000532997 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 MNS1Q8NEH6 495 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 TTC14Q96N46 770 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 DNAJC2Q99543 621 aaKnown RBP11.03□□□□□ -0.64
BDNF-216ENST00000532997 CPS1P31327 1500 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 SMC2O95347 1197 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 ZNF75DP51815 510 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 TTC5Q8N0Z6 440 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 PI4K2BQ8TCG2 481 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 RPS6KB1P23443 525 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 CBX8Q9HC52 389 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 SALL3Q9BXA9 1300 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 SPDYE4A6NLX3 237 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 FOSBP53539 338 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 ATL3Q6DD88 541 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 THEMISQ8N1K5 641 aaPredicted RBP11.03□□□□□ -0.64
BDNF-216ENST00000532997 LINS1Q8NG48 757 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 DDX11Q96FC9 970 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 DNAJC25Q9H1X3 360 aa11.03□□□□□ -0.64
BDNF-216ENST00000532997 RPAP1Q9BWH6 1393 aaPredicted RBP11.02□□□□□ -0.64
BDNF-216ENST00000532997 SLC27A2O14975 620 aa11.02□□□□□ -0.65
BDNF-216ENST00000532997 SYCP1Q15431 976 aa11.02□□□□□ -0.65
BDNF-216ENST00000532997 HOOK1Q9UJC3 728 aaKnown RBP11.02□□□□□ -0.65
BDNF-216ENST00000532997 MYO5BQ9ULV0 1848 aa11.02□□□□□ -0.65
BDNF-216ENST00000532997 GRM8O00222 908 aa11.02□□□□□ -0.65
BDNF-216ENST00000532997 TUBB4AP04350 444 aa11.02□□□□□ -0.65
BDNF-216ENST00000532997 NBPF7P0C2Y1 421 aaPredicted RBP11.02□□□□□ -0.65
BDNF-216ENST00000532997 DMTNQ08495 405 aa11.02□□□□□ -0.65
BDNF-216ENST00000532997 ME3Q16798 604 aa11.02□□□□□ -0.65
BDNF-216ENST00000532997 TMEM2Q9UHN6 1383 aa11.02□□□□□ -0.65
BDNF-216ENST00000532997 AKAP4Q5JQC9 854 aa11.02□□□□□ -0.65
BDNF-216ENST00000532997 USHBP1Q8N6Y0 703 aa11.02□□□□□ -0.65
BDNF-216ENST00000532997 LEO1Q8WVC0 666 aaPredicted RBP11.02□□□□□ -0.65
BDNF-216ENST00000532997 IL17RAQ96F46 866 aa11.02□□□□□ -0.65
BDNF-216ENST00000532997 USP31Q70CQ4 1352 aa11.01□□□□□ -0.65
BDNF-216ENST00000532997 CBFA2T2O43439 604 aa11.01□□□□□ -0.65
BDNF-216ENST00000532997 TTC6Q86TZ1 520 aa11.01□□□□□ -0.65
BDNF-216ENST00000532997 CCAR1Q8IX12 1150 aaKnown RBP11.01□□□□□ -0.65
BDNF-216ENST00000532997 BRF1Q92994 677 aa11.01□□□□□ -0.65
BDNF-216ENST00000532997 OVOS2A0A0J9YW53 1432 aa11.01□□□□□ -0.65
BDNF-216ENST00000532997 OVOS2Q6IE36 1432 aa11.01□□□□□ -0.65
BDNF-216ENST00000532997 DLG5Q8TDM6 1919 aa11.01□□□□□ -0.65
BDNF-216ENST00000532997 SFPQP23246 707 aaKnown RBP eCLIP11.01□□□□□ -0.65
BDNF-216ENST00000532997 GPS2Q13227 327 aa11.01□□□□□ -0.65
BDNF-216ENST00000532997 KRT222Q8N1A0 295 aa11.01□□□□□ -0.65
BDNF-216ENST00000532997 CCDC150Q8NCX0 1101 aa11.01□□□□□ -0.65
BDNF-216ENST00000532997 IL17REQ8NFR9 667 aa11.01□□□□□ -0.65
BDNF-216ENST00000532997 BEND3Q5T5X7 828 aa11.01□□□□□ -0.65
BDNF-216ENST00000532997 CDC37L1Q7L3B6 337 aa11.01□□□□□ -0.65
BDNF-216ENST00000532997 JMYQ8N9B5 988 aa11.01□□□□□ -0.65
BDNF-216ENST00000532997 ZNF397Q8NF99 534 aaPredicted RBP11.01□□□□□ -0.65
BDNF-216ENST00000532997 RAPGEF4Q8WZA2 1011 aa11.01□□□□□ -0.65
BDNF-216ENST00000532997 PYCARDQ9ULZ3 195 aa11.01□□□□□ -0.65
BDNF-216ENST00000532997 SKILP12757 684 aa11□□□□□ -0.65
BDNF-216ENST00000532997 PTH1RQ03431 593 aa11□□□□□ -0.65
BDNF-216ENST00000532997 GABPB1Q06547 395 aaPredicted RBP11□□□□□ -0.65
BDNF-216ENST00000532997 OLFM4Q6UX06 510 aa11□□□□□ -0.65
BDNF-216ENST00000532997 RALYLQ86SE5 291 aaKnown RBP11□□□□□ -0.65
BDNF-216ENST00000532997 FSIP1Q8NA03 581 aa11□□□□□ -0.65
BDNF-216ENST00000532997 NEUROD6Q96NK8 337 aa11□□□□□ -0.65
BDNF-216ENST00000532997 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11□□□□□ -0.65
BDNF-216ENST00000532997 EIF4A1P60842 406 aaKnown RBP11□□□□□ -0.65
BDNF-216ENST00000532997 TDRD7Q8NHU6 1098 aaKnown RBP11□□□□□ -0.65
BDNF-216ENST00000532997 FBXW7Q969H0 707 aa11□□□□□ -0.65
BDNF-216ENST00000532997 TRDNQ13061 729 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms