RNA–Protein interactions for RNA: ENST00000532699.1

SDHD-213, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3

Gene SDHD, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-213ENST00000532699 ZNF541Q9H0D2 1346 aa16.47■□□□□ 0.23
SDHD-213ENST00000532699 FKBP4Q02790 459 aaKnown RBP eCLIP16.47■□□□□ 0.23
SDHD-213ENST00000532699 KIF6Q6ZMV9 814 aa16.47■□□□□ 0.23
SDHD-213ENST00000532699 SYNE4Q8N205 404 aa16.47■□□□□ 0.23
SDHD-213ENST00000532699 RUNDC1Q96C34 613 aa16.47■□□□□ 0.23
SDHD-213ENST00000532699 HOXA10P31260 410 aaPredicted RBP16.46■□□□□ 0.23
SDHD-213ENST00000532699 SMC1BQ8NDV3 1235 aa16.46■□□□□ 0.23
SDHD-213ENST00000532699 LRRC37AA6NMS7 1700 aa16.45■□□□□ 0.22
SDHD-213ENST00000532699 CCDC184Q52MB2 194 aa16.45■□□□□ 0.22
SDHD-213ENST00000532699 SOGA3Q5TF21 947 aa16.45■□□□□ 0.22
SDHD-213ENST00000532699 NYXQ9GZU5 481 aa16.45■□□□□ 0.22
SDHD-213ENST00000532699 COPS6Q7L5N1 327 aa16.44■□□□□ 0.22
SDHD-213ENST00000532699 XAGE3Q8WTP9 111 aa16.44■□□□□ 0.22
SDHD-213ENST00000532699 KLRG1Q96E93 195 aa16.44■□□□□ 0.22
SDHD-213ENST00000532699 ZNF853P0CG23 659 aa16.43■□□□□ 0.22
SDHD-213ENST00000532699 ALDH1B1P30837 517 aa16.43■□□□□ 0.22
SDHD-213ENST00000532699 LMOD3Q0VAK6 560 aa16.43■□□□□ 0.22
SDHD-213ENST00000532699 SLC10A5Q5PT55 438 aa16.43■□□□□ 0.22
SDHD-213ENST00000532699 DPY19L2Q6NUT2 758 aa16.43■□□□□ 0.22
SDHD-213ENST00000532699 L3MBTL3Q96JM7 780 aaPredicted RBP16.43■□□□□ 0.22
SDHD-213ENST00000532699 DDX21Q9NR30 783 aaKnown RBP eCLIP16.43■□□□□ 0.22
SDHD-213ENST00000532699 DUOX1Q9NRD9 1551 aa16.43■□□□□ 0.22
SDHD-213ENST00000532699 GTF2E1P29083 439 aaPredicted RBP16.42■□□□□ 0.22
SDHD-213ENST00000532699 NLRP10Q86W26 655 aa16.42■□□□□ 0.22
SDHD-213ENST00000532699 RTKN2Q8IZC4 609 aa16.42■□□□□ 0.22
SDHD-213ENST00000532699 JMYQ8N9B5 988 aa16.42■□□□□ 0.22
SDHD-213ENST00000532699 ZNF428Q96B54 188 aa16.42■□□□□ 0.22
SDHD-213ENST00000532699 CHPF2Q9P2E5 772 aa16.42■□□□□ 0.22
SDHD-213ENST00000532699 FZD9O00144 591 aa16.41■□□□□ 0.22
SDHD-213ENST00000532699 IARSP41252 1262 aaKnown RBP16.41■□□□□ 0.22
SDHD-213ENST00000532699 AIMP1Q12904 312 aaKnown RBP16.41■□□□□ 0.22
SDHD-213ENST00000532699 WDR43Q15061 677 aaKnown RBP eCLIP16.41■□□□□ 0.22
SDHD-213ENST00000532699 CRAMP1Q96RY5 1269 aa16.41■□□□□ 0.22
SDHD-213ENST00000532699 PSMD1Q99460 953 aa16.41■□□□□ 0.22
SDHD-213ENST00000532699 MBIPQ9NS73 344 aa16.41■□□□□ 0.22
SDHD-213ENST00000532699 LAS1LQ9Y4W2 734 aaKnown RBP16.41■□□□□ 0.22
SDHD-213ENST00000532699 PARP10Q53GL7 1025 aa16.4■□□□□ 0.22
SDHD-213ENST00000532699 TAF1DQ9H5J8 278 aaPredicted RBP16.4■□□□□ 0.22
SDHD-213ENST00000532699 TRPM7Q96QT4 1865 aa16.39■□□□□ 0.22
SDHD-213ENST00000532699 POLR2AP24928 1970 aaKnown RBP16.39■□□□□ 0.21
SDHD-213ENST00000532699 APAF1O14727 1248 aa16.39■□□□□ 0.21
SDHD-213ENST00000532699 TCIRG1Q13488 830 aa16.39■□□□□ 0.21
SDHD-213ENST00000532699 PPP1R42Q7Z4L9 355 aa16.39■□□□□ 0.21
SDHD-213ENST00000532699 CFAP44Q96MT7 982 aa16.39■□□□□ 0.21
SDHD-213ENST00000532699 UTP14AQ9BVJ6 771 aaKnown RBP16.39■□□□□ 0.21
SDHD-213ENST00000532699 ABCC4O15439 1325 aa16.39■□□□□ 0.21
SDHD-213ENST00000532699 TCERG1O14776 1098 aaKnown RBP16.38■□□□□ 0.21
SDHD-213ENST00000532699 HCLS1P14317 486 aaPredicted RBP16.38■□□□□ 0.21
SDHD-213ENST00000532699 RPGRQ92834 1020 aaKnown RBP16.38■□□□□ 0.21
SDHD-213ENST00000532699 PASKQ96RG2 1323 aa16.38■□□□□ 0.21
SDHD-213ENST00000532699 MYH3P11055 1940 aa16.37■□□□□ 0.21
SDHD-213ENST00000532699 SCN9AQ15858 1988 aa16.37■□□□□ 0.21
SDHD-213ENST00000532699 PPEF1O14829 653 aaPredicted RBP16.37■□□□□ 0.21
SDHD-213ENST00000532699 IFFO2Q5TF58 517 aa16.37■□□□□ 0.21
SDHD-213ENST00000532699 DUSP27Q5VZP5 1158 aa16.37■□□□□ 0.21
SDHD-213ENST00000532699 CHADLQ6NUI6 762 aa16.37■□□□□ 0.21
SDHD-213ENST00000532699 RBM17Q96I25 401 aaKnown RBP16.37■□□□□ 0.21
SDHD-213ENST00000532699 ISCA1Q9BUE6 129 aa16.37■□□□□ 0.21
SDHD-213ENST00000532699 SPEF2Q9C093 1822 aa16.36■□□□□ 0.21
SDHD-213ENST00000532699 HOXB7P09629 217 aa16.36■□□□□ 0.21
SDHD-213ENST00000532699 HDGFL1Q5TGJ6 251 aa16.36■□□□□ 0.21
SDHD-213ENST00000532699 CACNA1FO60840 1977 aa16.36■□□□□ 0.21
SDHD-213ENST00000532699 RNF123Q5XPI4 1314 aa16.36■□□□□ 0.21
SDHD-213ENST00000532699 ITGBL1O95965 494 aaPredicted RBP16.35■□□□□ 0.21
SDHD-213ENST00000532699 CC2D2BQ6DHV5 1058 aa16.35■□□□□ 0.21
SDHD-213ENST00000532699 PLBD2Q8NHP8 589 aa16.35■□□□□ 0.21
SDHD-213ENST00000532699 NLRP3Q96P20 1036 aa16.35■□□□□ 0.21
SDHD-213ENST00000532699 ATP6V0A2Q9Y487 856 aa16.35■□□□□ 0.21
SDHD-213ENST00000532699 ATP5J2-PTCD1G3V325 749 aa16.34■□□□□ 0.21
SDHD-213ENST00000532699 C8orf58Q8NAV2 365 aa16.34■□□□□ 0.21
SDHD-213ENST00000532699 PHAXQ9H814 394 aaKnown RBP16.34■□□□□ 0.21
SDHD-213ENST00000532699 SCNN1DP51172 638 aa16.33■□□□□ 0.2
SDHD-213ENST00000532699 HSP90AB3PQ58FF7 597 aa16.33■□□□□ 0.2
SDHD-213ENST00000532699 ANKRD13DQ6ZTN6 518 aa16.33■□□□□ 0.2
SDHD-213ENST00000532699 LDHDQ86WU2 507 aa16.33■□□□□ 0.2
SDHD-213ENST00000532699 GPC2Q8N158 579 aa16.33■□□□□ 0.2
SDHD-213ENST00000532699 RTFDC1Q9BY42 306 aaPredicted RBP16.33■□□□□ 0.2
SDHD-213ENST00000532699 IFT57Q9NWB7 429 aa16.33■□□□□ 0.2
SDHD-213ENST00000532699 DBF4Q9UBU7 674 aaPredicted RBP16.33■□□□□ 0.2
SDHD-213ENST00000532699 TRMT112Q9UI30 125 aaKnown RBP16.33■□□□□ 0.2
SDHD-213ENST00000532699 ZNF646O15015 1829 aaPredicted RBP16.33■□□□□ 0.2
SDHD-213ENST00000532699 PSME4Q14997 1843 aa16.33■□□□□ 0.2
SDHD-213ENST00000532699 IQCA1LA6NCM1 817 aa16.32■□□□□ 0.2
SDHD-213ENST00000532699 ELL2O00472 640 aaPredicted RBP16.32■□□□□ 0.2
SDHD-213ENST00000532699 EPHX2P34913 555 aa16.32■□□□□ 0.2
SDHD-213ENST00000532699 AOC3Q16853 763 aa16.32■□□□□ 0.2
SDHD-213ENST00000532699 TSPYL6Q8N831 410 aa16.32■□□□□ 0.2
SDHD-213ENST00000532699 SH3TC1Q8TE82 1336 aa16.32■□□□□ 0.2
SDHD-213ENST00000532699 FAM89AQ96GI7 184 aa16.32■□□□□ 0.2
SDHD-213ENST00000532699 HACL1Q9UJ83 578 aa16.32■□□□□ 0.2
SDHD-213ENST00000532699 EPS15P42566 896 aa16.3■□□□□ 0.2
SDHD-213ENST00000532699 FMR1Q06787 632 aaKnown RBP eCLIP16.3■□□□□ 0.2
SDHD-213ENST00000532699 GRAPQ13588 217 aa16.3■□□□□ 0.2
SDHD-213ENST00000532699 EAPPQ56P03 285 aaPredicted RBP16.3■□□□□ 0.2
SDHD-213ENST00000532699 SP8Q8IXZ3 490 aa16.3■□□□□ 0.2
SDHD-213ENST00000532699 LARGE2Q8N3Y3 721 aa16.3■□□□□ 0.2
SDHD-213ENST00000532699 GRAPLQ8TC17 118 aaPredicted RBP16.3■□□□□ 0.2
SDHD-213ENST00000532699 CELF1Q92879 486 aaKnown RBP16.3■□□□□ 0.2
SDHD-213ENST00000532699 CREBZFQ9NS37 354 aa16.3■□□□□ 0.2
SDHD-213ENST00000532699 HYPKQ9NX55 129 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms