RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 DPY19L2Q6NUT2 758 aa29.98■■■□□ 2.39
LTBP3-220ENST00000532661 FKBP4Q02790 459 aaKnown RBP eCLIP29.97■■■□□ 2.39
LTBP3-220ENST00000532661 DUSP27Q5VZP5 1158 aa29.97■■■□□ 2.39
LTBP3-220ENST00000532661 RPGRQ92834 1020 aaKnown RBP29.97■■■□□ 2.39
LTBP3-220ENST00000532661 UTP14AQ9BVJ6 771 aaKnown RBP29.97■■■□□ 2.39
LTBP3-220ENST00000532661 ZNF277Q9NRM2 450 aaPredicted RBP29.97■■■□□ 2.39
LTBP3-220ENST00000532661 RIC1Q4ADV7 1423 aa29.96■■■□□ 2.39
LTBP3-220ENST00000532661 HOXA10P31260 410 aaPredicted RBP29.96■■■□□ 2.39
LTBP3-220ENST00000532661 HOXB7P09629 217 aa29.95■■■□□ 2.39
LTBP3-220ENST00000532661 APLP1P51693 650 aa29.95■■■□□ 2.39
LTBP3-220ENST00000532661 FSTL1Q12841 308 aa29.95■■■□□ 2.39
LTBP3-220ENST00000532661 RTKN2Q8IZC4 609 aa29.95■■■□□ 2.39
LTBP3-220ENST00000532661 DDNO94850 711 aaPredicted RBP29.94■■■□□ 2.38
LTBP3-220ENST00000532661 TCIRG1Q13488 830 aa29.94■■■□□ 2.38
LTBP3-220ENST00000532661 SLC51AQ86UW1 340 aa29.94■■■□□ 2.38
LTBP3-220ENST00000532661 NLRP10Q86W26 655 aa29.94■■■□□ 2.38
LTBP3-220ENST00000532661 DICER1Q9UPY3 1922 aaKnown RBP29.93■■■□□ 2.38
LTBP3-220ENST00000532661 HSP90AB3PQ58FF7 597 aa29.93■■■□□ 2.38
LTBP3-220ENST00000532661 SYNE4Q8N205 404 aa29.93■■■□□ 2.38
LTBP3-220ENST00000532661 ZNF428Q96B54 188 aa29.93■■■□□ 2.38
LTBP3-220ENST00000532661 IFT57Q9NWB7 429 aa29.93■■■□□ 2.38
LTBP3-220ENST00000532661 DBF4Q9UBU7 674 aaPredicted RBP29.93■■■□□ 2.38
LTBP3-220ENST00000532661 ZNF316A6NFI3 1004 aaPredicted RBP29.92■■■□□ 2.38
LTBP3-220ENST00000532661 SLC10A5Q5PT55 438 aa29.92■■■□□ 2.38
LTBP3-220ENST00000532661 ELL2O00472 640 aaPredicted RBP29.91■■■□□ 2.38
LTBP3-220ENST00000532661 TCERG1O14776 1098 aaKnown RBP29.91■■■□□ 2.38
LTBP3-220ENST00000532661 GNAI1P63096 354 aa29.91■■■□□ 2.38
LTBP3-220ENST00000532661 RBM17Q96I25 401 aaKnown RBP29.91■■■□□ 2.38
LTBP3-220ENST00000532661 NLRP3Q96P20 1036 aa29.91■■■□□ 2.38
LTBP3-220ENST00000532661 SNED1Q8TER0 1413 aa29.9■■■□□ 2.38
LTBP3-220ENST00000532661 HTRA3P83110 453 aa29.9■■■□□ 2.38
LTBP3-220ENST00000532661 SMC1BQ8NDV3 1235 aa29.9■■■□□ 2.38
LTBP3-220ENST00000532661 CRAMP1Q96RY5 1269 aa29.9■■■□□ 2.38
LTBP3-220ENST00000532661 CALD1Q05682 793 aaKnown RBP29.89■■■□□ 2.38
LTBP3-220ENST00000532661 WDR90Q96KV7 1748 aa29.88■■■□□ 2.37
LTBP3-220ENST00000532661 HCLS1P14317 486 aaPredicted RBP29.88■■■□□ 2.37
LTBP3-220ENST00000532661 ANKRD13DQ6ZTN6 518 aa29.88■■■□□ 2.37
LTBP3-220ENST00000532661 PLBD2Q8NHP8 589 aa29.88■■■□□ 2.37
LTBP3-220ENST00000532661 TRMT112Q9UI30 125 aaKnown RBP29.88■■■□□ 2.37
LTBP3-220ENST00000532661 PPEF1O14829 653 aaPredicted RBP29.87■■■□□ 2.37
LTBP3-220ENST00000532661 IARSP41252 1262 aaKnown RBP29.87■■■□□ 2.37
LTBP3-220ENST00000532661 HYPKQ9NX55 129 aa29.87■■■□□ 2.37
LTBP3-220ENST00000532661 CC2D2BQ6DHV5 1058 aa29.86■■■□□ 2.37
LTBP3-220ENST00000532661 DNAJC5GQ8N7S2 189 aa29.86■■■□□ 2.37
LTBP3-220ENST00000532661 C8orf58Q8NAV2 365 aa29.86■■■□□ 2.37
LTBP3-220ENST00000532661 PSMD1Q99460 953 aa29.86■■■□□ 2.37
LTBP3-220ENST00000532661 ZNF541Q9H0D2 1346 aa29.86■■■□□ 2.37
LTBP3-220ENST00000532661 RNF123Q5XPI4 1314 aa29.85■■■□□ 2.37
LTBP3-220ENST00000532661 ATP5J2-PTCD1G3V325 749 aa29.84■■■□□ 2.37
LTBP3-220ENST00000532661 ISCA1Q9BUE6 129 aa29.84■■■□□ 2.37
LTBP3-220ENST00000532661 ANKRD36CQ5JPF3 1778 aa29.84■■■□□ 2.37
LTBP3-220ENST00000532661 ABCC4O15439 1325 aa29.83■■■□□ 2.37
LTBP3-220ENST00000532661 SH3TC1Q8TE82 1336 aa29.83■■■□□ 2.37
LTBP3-220ENST00000532661 PHAXQ9H814 394 aaKnown RBP29.83■■■□□ 2.37
LTBP3-220ENST00000532661 MRS2Q9HD23 443 aa29.83■■■□□ 2.37
LTBP3-220ENST00000532661 ANP32CO43423 234 aa29.81■■■□□ 2.36
LTBP3-220ENST00000532661 POTEIP0CG38 1075 aa29.81■■■□□ 2.36
LTBP3-220ENST00000532661 POTEJP0CG39 1038 aa29.81■■■□□ 2.36
LTBP3-220ENST00000532661 FZD9O00144 591 aa29.8■■■□□ 2.36
LTBP3-220ENST00000532661 TSPYL6Q8N831 410 aa29.8■■■□□ 2.36
LTBP3-220ENST00000532661 TSR2Q969E8 191 aaKnown RBP29.8■■■□□ 2.36
LTBP3-220ENST00000532661 L3MBTL3Q96JM7 780 aaPredicted RBP29.8■■■□□ 2.36
LTBP3-220ENST00000532661 FAM89AQ96GI7 184 aa29.79■■■□□ 2.36
LTBP3-220ENST00000532661 ATP6V0A2Q9Y487 856 aa29.79■■■□□ 2.36
LTBP3-220ENST00000532661 COL4A5P29400 1685 aa29.79■■■□□ 2.36
LTBP3-220ENST00000532661 GRIPAP1Q4V328 841 aa29.77■■■□□ 2.36
LTBP3-220ENST00000532661 RIC3Q7Z5B4 369 aa29.77■■■□□ 2.36
LTBP3-220ENST00000532661 WWC1Q8IX03 1113 aa29.77■■■□□ 2.36
LTBP3-220ENST00000532661 JDP2Q8WYK2 163 aa29.77■■■□□ 2.36
LTBP3-220ENST00000532661 CCDC27Q2M243 656 aa29.76■■■□□ 2.35
LTBP3-220ENST00000532661 RTL5Q5HYW3 569 aaPredicted RBP29.76■■■□□ 2.35
LTBP3-220ENST00000532661 TAF1DQ9H5J8 278 aaPredicted RBP29.76■■■□□ 2.35
LTBP3-220ENST00000532661 IQCA1LA6NCM1 817 aa29.75■■■□□ 2.35
LTBP3-220ENST00000532661 GOLGA2Q08379 1002 aa29.75■■■□□ 2.35
LTBP3-220ENST00000532661 DDX46Q7L014 1031 aaKnown RBP29.75■■■□□ 2.35
LTBP3-220ENST00000532661 LARGE2Q8N3Y3 721 aa29.75■■■□□ 2.35
LTBP3-220ENST00000532661 LAMB2P55268 1798 aa29.75■■■□□ 2.35
LTBP3-220ENST00000532661 BBOX1O75936 387 aa29.74■■■□□ 2.35
LTBP3-220ENST00000532661 CHADLQ6NUI6 762 aa29.74■■■□□ 2.35
LTBP3-220ENST00000532661 TMX4Q9H1E5 349 aaPredicted RBP29.74■■■□□ 2.35
LTBP3-220ENST00000532661 TRIM28Q13263 835 aaKnown RBP29.73■■■□□ 2.35
LTBP3-220ENST00000532661 GRAPQ13588 217 aa29.73■■■□□ 2.35
LTBP3-220ENST00000532661 CCDC30Q5VVM6 783 aa29.73■■■□□ 2.35
LTBP3-220ENST00000532661 SP8Q8IXZ3 490 aa29.73■■■□□ 2.35
LTBP3-220ENST00000532661 GRAPLQ8TC17 118 aaPredicted RBP29.73■■■□□ 2.35
LTBP3-220ENST00000532661 MYD88Q99836 296 aa29.72■■■□□ 2.35
LTBP3-220ENST00000532661 EIF6P56537 245 aaKnown RBP29.71■■■□□ 2.35
LTBP3-220ENST00000532661 AOC3Q16853 763 aa29.71■■■□□ 2.35
LTBP3-220ENST00000532661 GPC2Q8N158 579 aa29.71■■■□□ 2.35
LTBP3-220ENST00000532661 KLRG1Q96E93 195 aa29.71■■■□□ 2.35
LTBP3-220ENST00000532661 HACL1Q9UJ83 578 aa29.71■■■□□ 2.35
LTBP3-220ENST00000532661 SALL2Q9Y467 1007 aaPredicted RBP29.71■■■□□ 2.35
LTBP3-220ENST00000532661 GJA3Q9Y6H8 435 aa29.71■■■□□ 2.35
LTBP3-220ENST00000532661 PPIP5K2O43314 1243 aa29.7■■■□□ 2.35
LTBP3-220ENST00000532661 IRS4O14654 1257 aaPredicted RBP29.69■■■□□ 2.34
LTBP3-220ENST00000532661 SF3B3Q15393 1217 aaKnown RBP29.69■■■□□ 2.34
LTBP3-220ENST00000532661 EAPPQ56P03 285 aaPredicted RBP29.69■■■□□ 2.34
LTBP3-220ENST00000532661 DPP8Q6V1X1 898 aaPredicted RBP29.69■■■□□ 2.34
LTBP3-220ENST00000532661 MPNDQ8N594 471 aa29.69■■■□□ 2.34
LTBP3-220ENST00000532661 RTFDC1Q9BY42 306 aaPredicted RBP29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms