RNA–Protein interactions for RNA: ENST00000532445.1

NCAPD3-209, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 532 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-209ENST00000532445 CRY2Q49AN0 593 aa30.14■■■□□ 2.42
NCAPD3-209ENST00000532445 DPY19L2Q6NUT2 758 aa30.14■■■□□ 2.42
NCAPD3-209ENST00000532445 MBIPQ9NS73 344 aa30.14■■■□□ 2.42
NCAPD3-209ENST00000532445 IFT57Q9NWB7 429 aa30.14■■■□□ 2.42
NCAPD3-209ENST00000532445 RBM46Q8TBY0 533 aaKnown RBP30.13■■■□□ 2.41
NCAPD3-209ENST00000532445 ANP32CO43423 234 aa30.12■■■□□ 2.41
NCAPD3-209ENST00000532445 DBF4Q9UBU7 674 aaPredicted RBP30.12■■■□□ 2.41
NCAPD3-209ENST00000532445 DUSP27Q5VZP5 1158 aa30.11■■■□□ 2.41
NCAPD3-209ENST00000532445 C7orf43Q8WVR3 580 aa30.11■■■□□ 2.41
NCAPD3-209ENST00000532445 UTP14AQ9BVJ6 771 aaKnown RBP30.11■■■□□ 2.41
NCAPD3-209ENST00000532445 RNF123Q5XPI4 1314 aa30.11■■■□□ 2.41
NCAPD3-209ENST00000532445 RTKN2Q8IZC4 609 aa30.1■■■□□ 2.41
NCAPD3-209ENST00000532445 ZNF853P0CG23 659 aa30.09■■■□□ 2.41
NCAPD3-209ENST00000532445 FKBP4Q02790 459 aaKnown RBP eCLIP30.09■■■□□ 2.41
NCAPD3-209ENST00000532445 DDX60Q8IY21 1712 aaKnown RBP30.08■■■□□ 2.41
NCAPD3-209ENST00000532445 VEGFAP15692 232 aaPredicted RBP30.08■■■□□ 2.41
NCAPD3-209ENST00000532445 CCDC184Q52MB2 194 aa30.08■■■□□ 2.41
NCAPD3-209ENST00000532445 RBM17Q96I25 401 aaKnown RBP30.08■■■□□ 2.41
NCAPD3-209ENST00000532445 NLRP3Q96P20 1036 aa30.07■■■□□ 2.4
NCAPD3-209ENST00000532445 HYPKQ9NX55 129 aa30.07■■■□□ 2.4
NCAPD3-209ENST00000532445 TCIRG1Q13488 830 aa30.06■■■□□ 2.4
NCAPD3-209ENST00000532445 MRS2Q9HD23 443 aa30.06■■■□□ 2.4
NCAPD3-209ENST00000532445 SCN4AP35499 1836 aa30.06■■■□□ 2.4
NCAPD3-209ENST00000532445 HOXA10P31260 410 aaPredicted RBP30.05■■■□□ 2.4
NCAPD3-209ENST00000532445 FSTL1Q12841 308 aa30.05■■■□□ 2.4
NCAPD3-209ENST00000532445 PLBD2Q8NHP8 589 aa30.05■■■□□ 2.4
NCAPD3-209ENST00000532445 APLP1P51693 650 aa30.04■■■□□ 2.4
NCAPD3-209ENST00000532445 CC2D2BQ6DHV5 1058 aa30.04■■■□□ 2.4
NCAPD3-209ENST00000532445 OLFM4Q6UX06 510 aa30.04■■■□□ 2.4
NCAPD3-209ENST00000532445 NLRP10Q86W26 655 aa30.04■■■□□ 2.4
NCAPD3-209ENST00000532445 CRAMP1Q96RY5 1269 aa30.04■■■□□ 2.4
NCAPD3-209ENST00000532445 TRMT112Q9UI30 125 aaKnown RBP30.03■■■□□ 2.4
NCAPD3-209ENST00000532445 ANKRD13DQ6ZTN6 518 aa30.02■■■□□ 2.4
NCAPD3-209ENST00000532445 SMC1BQ8NDV3 1235 aa30.02■■■□□ 2.4
NCAPD3-209ENST00000532445 CHMP4AQ9BY43 222 aa30.02■■■□□ 2.4
NCAPD3-209ENST00000532445 ZNF277Q9NRM2 450 aaPredicted RBP30.02■■■□□ 2.4
NCAPD3-209ENST00000532445 PPEF1O14829 653 aaPredicted RBP30.01■■■□□ 2.39
NCAPD3-209ENST00000532445 GRIPAP1Q4V328 841 aa30.01■■■□□ 2.39
NCAPD3-209ENST00000532445 SLC10A5Q5PT55 438 aa30.01■■■□□ 2.39
NCAPD3-209ENST00000532445 TMX4Q9H1E5 349 aaPredicted RBP30.01■■■□□ 2.39
NCAPD3-209ENST00000532445 SH3TC1Q8TE82 1336 aa30■■■□□ 2.39
NCAPD3-209ENST00000532445 SNED1Q8TER0 1413 aa30■■■□□ 2.39
NCAPD3-209ENST00000532445 TAF1P21675 1872 aa29.99■■■□□ 2.39
NCAPD3-209ENST00000532445 ELL2O00472 640 aaPredicted RBP29.99■■■□□ 2.39
NCAPD3-209ENST00000532445 IARSP41252 1262 aaKnown RBP29.99■■■□□ 2.39
NCAPD3-209ENST00000532445 C3orf67Q6ZVT6 689 aa29.99■■■□□ 2.39
NCAPD3-209ENST00000532445 PSMD1Q99460 953 aa29.99■■■□□ 2.39
NCAPD3-209ENST00000532445 GOLGA2Q08379 1002 aa29.98■■■□□ 2.39
NCAPD3-209ENST00000532445 CCDC27Q2M243 656 aa29.98■■■□□ 2.39
NCAPD3-209ENST00000532445 SYNE4Q8N205 404 aa29.98■■■□□ 2.39
NCAPD3-209ENST00000532445 DDNO94850 711 aaPredicted RBP29.96■■■□□ 2.39
NCAPD3-209ENST00000532445 CACNA1FO60840 1977 aa29.95■■■□□ 2.39
NCAPD3-209ENST00000532445 TCERG1O14776 1098 aaKnown RBP29.95■■■□□ 2.39
NCAPD3-209ENST00000532445 HCLS1P14317 486 aaPredicted RBP29.95■■■□□ 2.39
NCAPD3-209ENST00000532445 CCDC30Q5VVM6 783 aa29.95■■■□□ 2.39
NCAPD3-209ENST00000532445 RIC3Q7Z5B4 369 aa29.95■■■□□ 2.39
NCAPD3-209ENST00000532445 ABCC4O15439 1325 aa29.95■■■□□ 2.38
NCAPD3-209ENST00000532445 C8orf58Q8NAV2 365 aa29.94■■■□□ 2.38
NCAPD3-209ENST00000532445 JDP2Q8WYK2 163 aa29.94■■■□□ 2.38
NCAPD3-209ENST00000532445 LRRC37AA6NMS7 1700 aa29.93■■■□□ 2.38
NCAPD3-209ENST00000532445 IQCA1LA6NCM1 817 aa29.93■■■□□ 2.38
NCAPD3-209ENST00000532445 POTECB2RU33 542 aa29.93■■■□□ 2.38
NCAPD3-209ENST00000532445 DDX46Q7L014 1031 aaKnown RBP29.93■■■□□ 2.38
NCAPD3-209ENST00000532445 WWC1Q8IX03 1113 aa29.93■■■□□ 2.38
NCAPD3-209ENST00000532445 ISCA1Q9BUE6 129 aa29.93■■■□□ 2.38
NCAPD3-209ENST00000532445 ATP5J2-PTCD1G3V325 749 aa29.92■■■□□ 2.38
NCAPD3-209ENST00000532445 TSR2Q969E8 191 aaKnown RBP29.92■■■□□ 2.38
NCAPD3-209ENST00000532445 NCBP3Q53F19 620 aaKnown RBP29.91■■■□□ 2.38
NCAPD3-209ENST00000532445 PHAXQ9H814 394 aaKnown RBP29.91■■■□□ 2.38
NCAPD3-209ENST00000532445 ATP6V0A2Q9Y487 856 aa29.91■■■□□ 2.38
NCAPD3-209ENST00000532445 ZNF541Q9H0D2 1346 aa29.91■■■□□ 2.38
NCAPD3-209ENST00000532445 DDX58O95786 925 aaKnown RBP29.9■■■□□ 2.38
NCAPD3-209ENST00000532445 ZNF428Q96B54 188 aa29.9■■■□□ 2.38
NCAPD3-209ENST00000532445 IL16Q14005 1332 aa29.9■■■□□ 2.38
NCAPD3-209ENST00000532445 L3MBTL3Q96JM7 780 aaPredicted RBP29.89■■■□□ 2.38
NCAPD3-209ENST00000532445 MYH3P11055 1940 aa29.88■■■□□ 2.37
NCAPD3-209ENST00000532445 BBOX1O75936 387 aa29.88■■■□□ 2.37
NCAPD3-209ENST00000532445 LARGE2Q8N3Y3 721 aa29.88■■■□□ 2.37
NCAPD3-209ENST00000532445 FAM89AQ96GI7 184 aa29.88■■■□□ 2.37
NCAPD3-209ENST00000532445 STK31Q9BXU1 1019 aa29.88■■■□□ 2.37
NCAPD3-209ENST00000532445 COL4A5P29400 1685 aa29.88■■■□□ 2.37
NCAPD3-209ENST00000532445 FZD9O00144 591 aa29.87■■■□□ 2.37
NCAPD3-209ENST00000532445 TRIM28Q13263 835 aaKnown RBP29.87■■■□□ 2.37
NCAPD3-209ENST00000532445 GRAPQ13588 217 aa29.87■■■□□ 2.37
NCAPD3-209ENST00000532445 GRAPLQ8TC17 118 aaPredicted RBP29.87■■■□□ 2.37
NCAPD3-209ENST00000532445 EIF6P56537 245 aaKnown RBP29.86■■■□□ 2.37
NCAPD3-209ENST00000532445 TSPYL6Q8N831 410 aa29.86■■■□□ 2.37
NCAPD3-209ENST00000532445 SUPT20HQ8NEM7 779 aa29.86■■■□□ 2.37
NCAPD3-209ENST00000532445 TWISTNBQ3B726 338 aaPredicted RBP29.85■■■□□ 2.37
NCAPD3-209ENST00000532445 TMC4Q7Z404 712 aa29.85■■■□□ 2.37
NCAPD3-209ENST00000532445 MYD88Q99836 296 aa29.85■■■□□ 2.37
NCAPD3-209ENST00000532445 HSP90B1P14625 803 aaKnown RBP29.84■■■□□ 2.37
NCAPD3-209ENST00000532445 RTL5Q5HYW3 569 aaPredicted RBP29.84■■■□□ 2.37
NCAPD3-209ENST00000532445 SP8Q8IXZ3 490 aa29.84■■■□□ 2.37
NCAPD3-209ENST00000532445 GPC2Q8N158 579 aa29.84■■■□□ 2.37
NCAPD3-209ENST00000532445 PPIP5K2O43314 1243 aa29.83■■■□□ 2.37
NCAPD3-209ENST00000532445 DPP8Q6V1X1 898 aaPredicted RBP29.83■■■□□ 2.37
NCAPD3-209ENST00000532445 SLC51AQ86UW1 340 aa29.83■■■□□ 2.37
NCAPD3-209ENST00000532445 NIM1KQ8IY84 436 aa29.83■■■□□ 2.37
NCAPD3-209ENST00000532445 HACL1Q9UJ83 578 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms