RNA–Protein interactions for RNA: ENST00000532056.5

KNL1-208, Transcript of kinetochore scaffold 1, humanhuman

TSL 3

Gene KNL1, Length 259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-208ENST00000532056 BRIP1Q9BX63 1249 aa12.82□□□□□ -0.36
KNL1-208ENST00000532056 TNRC6CQ9HCJ0 1690 aaKnown RBP12.82□□□□□ -0.36
KNL1-208ENST00000532056 COL11A2P13942 1736 aaPredicted RBP12.82□□□□□ -0.36
KNL1-208ENST00000532056 ABCC12Q96J65 1359 aa12.81□□□□□ -0.36
KNL1-208ENST00000532056 GTF2E1P29083 439 aaPredicted RBP12.81□□□□□ -0.36
KNL1-208ENST00000532056 PDE6BP35913 854 aa12.81□□□□□ -0.36
KNL1-208ENST00000532056 CCDC24Q8N4L8 307 aa12.81□□□□□ -0.36
KNL1-208ENST00000532056 CCDC191Q8NCU4 936 aa12.81□□□□□ -0.36
KNL1-208ENST00000532056 PDZRN3Q9UPQ7 1066 aa12.81□□□□□ -0.36
KNL1-208ENST00000532056 LAMB2P55268 1798 aa12.81□□□□□ -0.36
KNL1-208ENST00000532056 BRCA1P38398 1863 aaKnown RBP12.8□□□□□ -0.36
KNL1-208ENST00000532056 IGKV5-2P06315 115 aa12.8□□□□□ -0.36
KNL1-208ENST00000532056 DPEP1P16444 411 aa12.8□□□□□ -0.36
KNL1-208ENST00000532056 ERFEQ4G0M1 354 aa12.8□□□□□ -0.36
KNL1-208ENST00000532056 NUTM1Q86Y26 1132 aa12.8□□□□□ -0.36
KNL1-208ENST00000532056 CWC25Q9NXE8 425 aaPredicted RBP12.8□□□□□ -0.36
KNL1-208ENST00000532056 TRMT112Q9UI30 125 aaKnown RBP12.8□□□□□ -0.36
KNL1-208ENST00000532056 KIF16BQ96L93 1317 aa12.8□□□□□ -0.36
KNL1-208ENST00000532056 A0A0G2JLW4 131 aa12.79□□□□□ -0.36
KNL1-208ENST00000532056 KLRG2A4D1S0 409 aaPredicted RBP12.79□□□□□ -0.36
KNL1-208ENST00000532056 NEURL1BA8MQ27 555 aa12.79□□□□□ -0.36
KNL1-208ENST00000532056 F6X3S4 739 aa12.79□□□□□ -0.36
KNL1-208ENST00000532056 LINS1Q8NG48 757 aa12.79□□□□□ -0.36
KNL1-208ENST00000532056 SH3TC1Q8TE82 1336 aa12.79□□□□□ -0.36
KNL1-208ENST00000532056 DDX60Q8IY21 1712 aaKnown RBP12.79□□□□□ -0.36
KNL1-208ENST00000532056 H0YIN7 160 aa12.78□□□□□ -0.36
KNL1-208ENST00000532056 KCNA3P22001 575 aa12.78□□□□□ -0.36
KNL1-208ENST00000532056 CHRNA5P30532 468 aa12.78□□□□□ -0.36
KNL1-208ENST00000532056 CWF19L2Q2TBE0 894 aaKnown RBP12.78□□□□□ -0.36
KNL1-208ENST00000532056 SLC10A5Q5PT55 438 aa12.78□□□□□ -0.36
KNL1-208ENST00000532056 BEND3Q5T5X7 828 aa12.78□□□□□ -0.36
KNL1-208ENST00000532056 C2CD5Q86YS7 1000 aa12.78□□□□□ -0.36
KNL1-208ENST00000532056 BCAR3O75815 825 aa12.77□□□□□ -0.37
KNL1-208ENST00000532056 PCCAP05165 728 aaPredicted RBP12.77□□□□□ -0.37
KNL1-208ENST00000532056 ZBTB38Q8NAP3 1195 aaPredicted RBP12.77□□□□□ -0.37
KNL1-208ENST00000532056 FAM89AQ96GI7 184 aa12.77□□□□□ -0.37
KNL1-208ENST00000532056 API5Q9BZZ5 524 aaKnown RBP12.77□□□□□ -0.37
KNL1-208ENST00000532056 NOB1Q9ULX3 412 aaKnown RBP12.77□□□□□ -0.37
KNL1-208ENST00000532056 ALDH1L1O75891 902 aa12.76□□□□□ -0.37
KNL1-208ENST00000532056 SRGNP10124 158 aa12.76□□□□□ -0.37
KNL1-208ENST00000532056 GCKRQ14397 625 aa12.76□□□□□ -0.37
KNL1-208ENST00000532056 CRY2Q49AN0 593 aa12.76□□□□□ -0.37
KNL1-208ENST00000532056 SLC4A10Q6U841 1118 aa12.76□□□□□ -0.37
KNL1-208ENST00000532056 SYNE4Q8N205 404 aa12.76□□□□□ -0.37
KNL1-208ENST00000532056 ARHGAP45Q92619 1136 aa12.76□□□□□ -0.37
KNL1-208ENST00000532056 SRCIN1Q9C0H9 1055 aa12.76□□□□□ -0.37
KNL1-208ENST00000532056 PIM2Q9P1W9 311 aa12.76□□□□□ -0.37
KNL1-208ENST00000532056 CDHR2Q9BYE9 1310 aa12.76□□□□□ -0.37
KNL1-208ENST00000532056 IRS4O14654 1257 aaPredicted RBP12.75□□□□□ -0.37
KNL1-208ENST00000532056 HCLS1P14317 486 aaPredicted RBP12.75□□□□□ -0.37
KNL1-208ENST00000532056 HSP90B1P14625 803 aaKnown RBP12.75□□□□□ -0.37
KNL1-208ENST00000532056 STYK1Q6J9G0 422 aa12.75□□□□□ -0.37
KNL1-208ENST00000532056 MASTLQ96GX5 879 aa12.75□□□□□ -0.37
KNL1-208ENST00000532056 NLRP3Q96P20 1036 aa12.75□□□□□ -0.37
KNL1-208ENST00000532056 ARFGEF1Q9Y6D6 1849 aa12.75□□□□□ -0.37
KNL1-208ENST00000532056 DCAF8L1A6NGE4 600 aa12.74□□□□□ -0.37
KNL1-208ENST00000532056 H7C1W4 665 aa12.74□□□□□ -0.37
KNL1-208ENST00000532056 IPO8O15397 1037 aaKnown RBP12.74□□□□□ -0.37
KNL1-208ENST00000532056 NPR1P16066 1061 aa12.74□□□□□ -0.37
KNL1-208ENST00000532056 DALRD3Q5D0E6 543 aaKnown RBP12.74□□□□□ -0.37
KNL1-208ENST00000532056 RTL5Q5HYW3 569 aaPredicted RBP12.74□□□□□ -0.37
KNL1-208ENST00000532056 C3orf67Q6ZVT6 689 aa12.74□□□□□ -0.37
KNL1-208ENST00000532056 ABCC4O15439 1325 aa12.73□□□□□ -0.37
KNL1-208ENST00000532056 YBX3P16989 372 aaKnown RBP eCLIP12.73□□□□□ -0.37
KNL1-208ENST00000532056 HOXA10P31260 410 aaPredicted RBP12.73□□□□□ -0.37
KNL1-208ENST00000532056 GPR162Q16538 588 aa12.73□□□□□ -0.37
KNL1-208ENST00000532056 ZKSCAN2Q63HK3 967 aa12.73□□□□□ -0.37
KNL1-208ENST00000532056 ATF7IPQ6VMQ6 1270 aa12.73□□□□□ -0.37
KNL1-208ENST00000532056 UBE3BQ7Z3V4 1068 aa12.73□□□□□ -0.37
KNL1-208ENST00000532056 PELP1Q8IZL8 1130 aaKnown RBP12.73□□□□□ -0.37
KNL1-208ENST00000532056 TTLL6Q8N841 843 aa12.73□□□□□ -0.37
KNL1-208ENST00000532056 RPGRQ92834 1020 aaKnown RBP12.73□□□□□ -0.37
KNL1-208ENST00000532056 FRAT1Q92837 279 aaPredicted RBP12.73□□□□□ -0.37
KNL1-208ENST00000532056 CNKSR1Q969H4 720 aa12.73□□□□□ -0.37
KNL1-208ENST00000532056 ZNF622Q969S3 477 aaKnown RBP eCLIP12.73□□□□□ -0.37
KNL1-208ENST00000532056 RCAN3Q9UKA8 241 aa12.73□□□□□ -0.37
KNL1-208ENST00000532056 WWC3Q9ULE0 1092 aa12.73□□□□□ -0.37
KNL1-208ENST00000532056 BCS1LQ9Y276 419 aa12.73□□□□□ -0.37
KNL1-208ENST00000532056 CACNA1SQ13698 1873 aa12.73□□□□□ -0.37
KNL1-208ENST00000532056 GRM8O00222 908 aa12.72□□□□□ -0.37
KNL1-208ENST00000532056 TRIM27P14373 513 aa12.72□□□□□ -0.37
KNL1-208ENST00000532056 ALDH1B1P30837 517 aa12.72□□□□□ -0.37
KNL1-208ENST00000532056 CCT4P50991 539 aaKnown RBP12.72□□□□□ -0.37
KNL1-208ENST00000532056 CASP7P55210 303 aa12.72□□□□□ -0.37
KNL1-208ENST00000532056 SF3B3Q15393 1217 aaKnown RBP12.72□□□□□ -0.37
KNL1-208ENST00000532056 JARID2Q92833 1246 aaPredicted RBP12.72□□□□□ -0.37
KNL1-208ENST00000532056 MYH3P11055 1940 aa12.72□□□□□ -0.37
KNL1-208ENST00000532056 GRIN3BO60391 1043 aa12.71□□□□□ -0.37
KNL1-208ENST00000532056 PDE8AO60658 829 aa12.71□□□□□ -0.37
KNL1-208ENST00000532056 RBM17Q96I25 401 aaKnown RBP12.71□□□□□ -0.37
KNL1-208ENST00000532056 CRAMP1Q96RY5 1269 aa12.71□□□□□ -0.37
KNL1-208ENST00000532056 PLA2G12BQ9BX93 195 aa12.71□□□□□ -0.37
KNL1-208ENST00000532056 C9orf78Q9NZ63 289 aaPredicted RBP12.71□□□□□ -0.37
KNL1-208ENST00000532056 GOLGB1Q14789 3259 aaKnown RBP12.71□□□□□ -0.38
KNL1-208ENST00000532056 UTYO14607 1347 aa12.7□□□□□ -0.38
KNL1-208ENST00000532056 SLX4Q8IY92 1834 aa12.7□□□□□ -0.38
KNL1-208ENST00000532056 INTS3Q68E01 1043 aaKnown RBP12.7□□□□□ -0.38
KNL1-208ENST00000532056 PRPF40BQ6NWY9 871 aaKnown RBP12.7□□□□□ -0.38
KNL1-208ENST00000532056 CTSWP56202 376 aa12.69□□□□□ -0.38
KNL1-208ENST00000532056 CCDC152Q4G0S7 254 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms