RNA–Protein interactions for RNA: ENST00000531523.1

SNHG9-201, Transcript of small nucleolar RNA host gene 9, humanhuman

TSL 1 (best) BASIC

Gene SNHG9, Length 275 nt, Biotype lincRNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG9-201ENST00000531523 HOXA10P31260 410 aaPredicted RBP19.55■□□□□ 0.72
SNHG9-201ENST00000531523 ZNF277Q9NRM2 450 aaPredicted RBP19.55■□□□□ 0.72
SNHG9-201ENST00000531523 ZNF541Q9H0D2 1346 aa19.54■□□□□ 0.72
SNHG9-201ENST00000531523 GTF2E1P29083 439 aaPredicted RBP19.54■□□□□ 0.72
SNHG9-201ENST00000531523 ALDH1B1P30837 517 aa19.54■□□□□ 0.72
SNHG9-201ENST00000531523 DPY19L2Q6NUT2 758 aa19.54■□□□□ 0.72
SNHG9-201ENST00000531523 NECTIN2Q92692 538 aa19.54■□□□□ 0.72
SNHG9-201ENST00000531523 TAF1P21675 1872 aa19.53■□□□□ 0.72
SNHG9-201ENST00000531523 LTBP1Q14766 1721 aa19.53■□□□□ 0.72
SNHG9-201ENST00000531523 POTEIP0CG38 1075 aa19.52■□□□□ 0.72
SNHG9-201ENST00000531523 POTEJP0CG39 1038 aa19.52■□□□□ 0.72
SNHG9-201ENST00000531523 PARP10Q53GL7 1025 aa19.52■□□□□ 0.72
SNHG9-201ENST00000531523 COPS6Q7L5N1 327 aa19.52■□□□□ 0.72
SNHG9-201ENST00000531523 RTKN2Q8IZC4 609 aa19.52■□□□□ 0.72
SNHG9-201ENST00000531523 XAGE3Q8WTP9 111 aa19.52■□□□□ 0.72
SNHG9-201ENST00000531523 L3MBTL3Q96JM7 780 aaPredicted RBP19.52■□□□□ 0.72
SNHG9-201ENST00000531523 DDX21Q9NR30 783 aaKnown RBP eCLIP19.52■□□□□ 0.72
SNHG9-201ENST00000531523 LRRC37AA6NMS7 1700 aa19.51■□□□□ 0.71
SNHG9-201ENST00000531523 PSMD1Q99460 953 aa19.51■□□□□ 0.71
SNHG9-201ENST00000531523 CHPF2Q9P2E5 772 aa19.51■□□□□ 0.71
SNHG9-201ENST00000531523 COL4A1P02462 1669 aa19.5■□□□□ 0.71
SNHG9-201ENST00000531523 ZNF853P0CG23 659 aa19.5■□□□□ 0.71
SNHG9-201ENST00000531523 IARSP41252 1262 aaKnown RBP19.5■□□□□ 0.71
SNHG9-201ENST00000531523 SLC10A5Q5PT55 438 aa19.5■□□□□ 0.71
SNHG9-201ENST00000531523 PPP1R42Q7Z4L9 355 aa19.5■□□□□ 0.71
SNHG9-201ENST00000531523 NLRP10Q86W26 655 aa19.5■□□□□ 0.71
SNHG9-201ENST00000531523 SYNE4Q8N205 404 aa19.5■□□□□ 0.71
SNHG9-201ENST00000531523 KLRG1Q96E93 195 aa19.5■□□□□ 0.71
SNHG9-201ENST00000531523 CRAMP1Q96RY5 1269 aa19.5■□□□□ 0.71
SNHG9-201ENST00000531523 LAS1LQ9Y4W2 734 aaKnown RBP19.5■□□□□ 0.71
SNHG9-201ENST00000531523 FZD9O00144 591 aa19.49■□□□□ 0.71
SNHG9-201ENST00000531523 HOXB7P09629 217 aa19.49■□□□□ 0.71
SNHG9-201ENST00000531523 JMYQ8N9B5 988 aa19.49■□□□□ 0.71
SNHG9-201ENST00000531523 RPGRQ92834 1020 aaKnown RBP19.49■□□□□ 0.71
SNHG9-201ENST00000531523 CFAP44Q96MT7 982 aa19.49■□□□□ 0.71
SNHG9-201ENST00000531523 MBIPQ9NS73 344 aa19.49■□□□□ 0.71
SNHG9-201ENST00000531523 RNF123Q5XPI4 1314 aa19.49■□□□□ 0.71
SNHG9-201ENST00000531523 AIMP1Q12904 312 aaKnown RBP19.48■□□□□ 0.71
SNHG9-201ENST00000531523 UTP14AQ9BVJ6 771 aaKnown RBP19.48■□□□□ 0.71
SNHG9-201ENST00000531523 APAF1O14727 1248 aa19.47■□□□□ 0.71
SNHG9-201ENST00000531523 TCIRG1Q13488 830 aa19.47■□□□□ 0.71
SNHG9-201ENST00000531523 CCDC184Q52MB2 194 aa19.47■□□□□ 0.71
SNHG9-201ENST00000531523 HDGFL1Q5TGJ6 251 aa19.47■□□□□ 0.71
SNHG9-201ENST00000531523 DUOX1Q9NRD9 1551 aa19.47■□□□□ 0.71
SNHG9-201ENST00000531523 ABCC4O15439 1325 aa19.47■□□□□ 0.71
SNHG9-201ENST00000531523 PPEF1O14829 653 aaPredicted RBP19.46■□□□□ 0.71
SNHG9-201ENST00000531523 HSP90AB3PQ58FF7 597 aa19.46■□□□□ 0.71
SNHG9-201ENST00000531523 CC2D2BQ6DHV5 1058 aa19.46■□□□□ 0.71
SNHG9-201ENST00000531523 RBM17Q96I25 401 aaKnown RBP19.46■□□□□ 0.71
SNHG9-201ENST00000531523 TAF1DQ9H5J8 278 aaPredicted RBP19.46■□□□□ 0.71
SNHG9-201ENST00000531523 DUSP27Q5VZP5 1158 aa19.45■□□□□ 0.7
SNHG9-201ENST00000531523 NLRP3Q96P20 1036 aa19.45■□□□□ 0.7
SNHG9-201ENST00000531523 CHADLQ6NUI6 762 aa19.44■□□□□ 0.7
SNHG9-201ENST00000531523 ISCA1Q9BUE6 129 aa19.44■□□□□ 0.7
SNHG9-201ENST00000531523 IFT57Q9NWB7 429 aa19.44■□□□□ 0.7
SNHG9-201ENST00000531523 IQCA1LA6NCM1 817 aa19.43■□□□□ 0.7
SNHG9-201ENST00000531523 HCLS1P14317 486 aaPredicted RBP19.43■□□□□ 0.7
SNHG9-201ENST00000531523 PLBD2Q8NHP8 589 aa19.43■□□□□ 0.7
SNHG9-201ENST00000531523 DBF4Q9UBU7 674 aaPredicted RBP19.43■□□□□ 0.7
SNHG9-201ENST00000531523 ATP6V0A2Q9Y487 856 aa19.42■□□□□ 0.7
SNHG9-201ENST00000531523 PASKQ96RG2 1323 aa19.42■□□□□ 0.7
SNHG9-201ENST00000531523 PCNTO95613 3336 aa19.41■□□□□ 0.7
SNHG9-201ENST00000531523 TCERG1O14776 1098 aaKnown RBP19.41■□□□□ 0.7
SNHG9-201ENST00000531523 GRIPAP1Q4V328 841 aa19.41■□□□□ 0.7
SNHG9-201ENST00000531523 LDHDQ86WU2 507 aa19.41■□□□□ 0.7
SNHG9-201ENST00000531523 ZNF428Q96B54 188 aa19.41■□□□□ 0.7
SNHG9-201ENST00000531523 TRMT112Q9UI30 125 aaKnown RBP19.41■□□□□ 0.7
SNHG9-201ENST00000531523 SH3TC1Q8TE82 1336 aa19.41■□□□□ 0.7
SNHG9-201ENST00000531523 IFFO2Q5TF58 517 aa19.4■□□□□ 0.7
SNHG9-201ENST00000531523 ANKRD13DQ6ZTN6 518 aa19.4■□□□□ 0.7
SNHG9-201ENST00000531523 GPC2Q8N158 579 aa19.4■□□□□ 0.7
SNHG9-201ENST00000531523 RTFDC1Q9BY42 306 aaPredicted RBP19.4■□□□□ 0.7
SNHG9-201ENST00000531523 HACL1Q9UJ83 578 aa19.4■□□□□ 0.7
SNHG9-201ENST00000531523 EPHX2P34913 555 aa19.39■□□□□ 0.69
SNHG9-201ENST00000531523 HYPKQ9NX55 129 aa19.39■□□□□ 0.69
SNHG9-201ENST00000531523 ATP5J2-PTCD1G3V325 749 aa19.38■□□□□ 0.69
SNHG9-201ENST00000531523 ITGBL1O95965 494 aaPredicted RBP19.38■□□□□ 0.69
SNHG9-201ENST00000531523 SCNN1DP51172 638 aa19.38■□□□□ 0.69
SNHG9-201ENST00000531523 GNAI1P63096 354 aa19.38■□□□□ 0.69
SNHG9-201ENST00000531523 C8orf58Q8NAV2 365 aa19.38■□□□□ 0.69
SNHG9-201ENST00000531523 JDP2Q8WYK2 163 aa19.38■□□□□ 0.69
SNHG9-201ENST00000531523 GRAPQ13588 217 aa19.37■□□□□ 0.69
SNHG9-201ENST00000531523 AOC3Q16853 763 aa19.37■□□□□ 0.69
SNHG9-201ENST00000531523 LARGE2Q8N3Y3 721 aa19.37■□□□□ 0.69
SNHG9-201ENST00000531523 GRAPLQ8TC17 118 aaPredicted RBP19.37■□□□□ 0.69
SNHG9-201ENST00000531523 PHAXQ9H814 394 aaKnown RBP19.37■□□□□ 0.69
SNHG9-201ENST00000531523 CREBZFQ9NS37 354 aa19.37■□□□□ 0.69
SNHG9-201ENST00000531523 BBOX1O75936 387 aa19.36■□□□□ 0.69
SNHG9-201ENST00000531523 TRIM28Q13263 835 aaKnown RBP19.36■□□□□ 0.69
SNHG9-201ENST00000531523 SP8Q8IXZ3 490 aa19.36■□□□□ 0.69
SNHG9-201ENST00000531523 FAM89AQ96GI7 184 aa19.36■□□□□ 0.69
SNHG9-201ENST00000531523 ELL2O00472 640 aaPredicted RBP19.35■□□□□ 0.69
SNHG9-201ENST00000531523 PPIP5K2O43314 1243 aa19.35■□□□□ 0.69
SNHG9-201ENST00000531523 EIF6P56537 245 aaKnown RBP19.35■□□□□ 0.69
SNHG9-201ENST00000531523 CALD1Q05682 793 aaKnown RBP19.35■□□□□ 0.69
SNHG9-201ENST00000531523 EAPPQ56P03 285 aaPredicted RBP19.35■□□□□ 0.69
SNHG9-201ENST00000531523 TSPYL6Q8N831 410 aa19.35■□□□□ 0.69
SNHG9-201ENST00000531523 SF3B3Q15393 1217 aaKnown RBP19.34■□□□□ 0.69
SNHG9-201ENST00000531523 DDX46Q7L014 1031 aaKnown RBP19.34■□□□□ 0.69
SNHG9-201ENST00000531523 NIM1KQ8IY84 436 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms