RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 CCDC30Q5VVM6 783 aa16.23■□□□□ 0.19
C11orf54-210ENST00000531516 LRP10Q7Z4F1 713 aa16.23■□□□□ 0.19
C11orf54-210ENST00000531516 TRMT112Q9UI30 125 aaKnown RBP16.23■□□□□ 0.19
C11orf54-210ENST00000531516 GLTPD2A6NH11 291 aa16.22■□□□□ 0.19
C11orf54-210ENST00000531516 NTSR2O95665 410 aa16.22■□□□□ 0.19
C11orf54-210ENST00000531516 DDX58O95786 925 aaKnown RBP16.22■□□□□ 0.19
C11orf54-210ENST00000531516 CRY2Q49AN0 593 aa16.22■□□□□ 0.19
C11orf54-210ENST00000531516 RIC3Q7Z5B4 369 aa16.22■□□□□ 0.19
C11orf54-210ENST00000531516 NMRK2Q9NPI5 230 aa16.22■□□□□ 0.19
C11orf54-210ENST00000531516 RIC1Q4ADV7 1423 aa16.21■□□□□ 0.19
C11orf54-210ENST00000531516 ELL2O00472 640 aaPredicted RBP16.21■□□□□ 0.19
C11orf54-210ENST00000531516 FKBP4Q02790 459 aaKnown RBP eCLIP16.21■□□□□ 0.19
C11orf54-210ENST00000531516 STK31Q9BXU1 1019 aa16.21■□□□□ 0.19
C11orf54-210ENST00000531516 RRAGCQ9HB90 399 aa16.21■□□□□ 0.19
C11orf54-210ENST00000531516 SH3TC1Q8TE82 1336 aa16.2■□□□□ 0.18
C11orf54-210ENST00000531516 VEGFAP15692 232 aaPredicted RBP16.2■□□□□ 0.18
C11orf54-210ENST00000531516 HOXA10P31260 410 aaPredicted RBP16.2■□□□□ 0.18
C11orf54-210ENST00000531516 CCDC184Q52MB2 194 aa16.2■□□□□ 0.18
C11orf54-210ENST00000531516 NLRP10Q86W26 655 aa16.2■□□□□ 0.18
C11orf54-210ENST00000531516 RBM46Q8TBY0 533 aaKnown RBP16.2■□□□□ 0.18
C11orf54-210ENST00000531516 CRAMP1Q96RY5 1269 aa16.2■□□□□ 0.18
C11orf54-210ENST00000531516 DLEC1Q9Y238 1755 aa16.2■□□□□ 0.18
C11orf54-210ENST00000531516 ABCC12Q96J65 1359 aa16.19■□□□□ 0.18
C11orf54-210ENST00000531516 HSPA6P17066 643 aa16.19■□□□□ 0.18
C11orf54-210ENST00000531516 SLC10A5Q5PT55 438 aa16.19■□□□□ 0.18
C11orf54-210ENST00000531516 WWC1Q8IX03 1113 aa16.19■□□□□ 0.18
C11orf54-210ENST00000531516 JDP2Q8WYK2 163 aa16.19■□□□□ 0.18
C11orf54-210ENST00000531516 IL16Q14005 1332 aa16.19■□□□□ 0.18
C11orf54-210ENST00000531516 PPEF1O14829 653 aaPredicted RBP16.18■□□□□ 0.18
C11orf54-210ENST00000531516 DDX46Q7L014 1031 aaKnown RBP16.18■□□□□ 0.18
C11orf54-210ENST00000531516 C7orf43Q8WVR3 580 aa16.18■□□□□ 0.18
C11orf54-210ENST00000531516 ANKRD31Q8N7Z5 1873 aa16.17■□□□□ 0.18
C11orf54-210ENST00000531516 FSTL1Q12841 308 aa16.17■□□□□ 0.18
C11orf54-210ENST00000531516 WDR63Q8IWG1 891 aa16.17■□□□□ 0.18
C11orf54-210ENST00000531516 FAM9BQ8IZU0 186 aa16.17■□□□□ 0.18
C11orf54-210ENST00000531516 C8orf58Q8NAV2 365 aa16.17■□□□□ 0.18
C11orf54-210ENST00000531516 IQCA1LA6NCM1 817 aa16.16■□□□□ 0.18
C11orf54-210ENST00000531516 BBOX1O75936 387 aa16.16■□□□□ 0.18
C11orf54-210ENST00000531516 SYNE4Q8N205 404 aa16.16■□□□□ 0.18
C11orf54-210ENST00000531516 SMC1BQ8NDV3 1235 aa16.16■□□□□ 0.18
C11orf54-210ENST00000531516 SUPT20HQ8NEM7 779 aa16.16■□□□□ 0.18
C11orf54-210ENST00000531516 PSMD1Q99460 953 aa16.16■□□□□ 0.18
C11orf54-210ENST00000531516 ATP5J2-PTCD1G3V325 749 aa16.15■□□□□ 0.18
C11orf54-210ENST00000531516 HCLS1P14317 486 aaPredicted RBP16.15■□□□□ 0.18
C11orf54-210ENST00000531516 IARSP41252 1262 aaKnown RBP16.15■□□□□ 0.18
C11orf54-210ENST00000531516 APLP1P51693 650 aa16.15■□□□□ 0.18
C11orf54-210ENST00000531516 NEXNQ0ZGT2 675 aa16.15■□□□□ 0.18
C11orf54-210ENST00000531516 TRIM28Q13263 835 aaKnown RBP16.15■□□□□ 0.18
C11orf54-210ENST00000531516 TWISTNBQ3B726 338 aaPredicted RBP16.15■□□□□ 0.18
C11orf54-210ENST00000531516 TMC4Q7Z404 712 aa16.15■□□□□ 0.18
C11orf54-210ENST00000531516 TSR2Q969E8 191 aaKnown RBP16.15■□□□□ 0.18
C11orf54-210ENST00000531516 ZNF277Q9NRM2 450 aaPredicted RBP16.15■□□□□ 0.18
C11orf54-210ENST00000531516 SALL2Q9Y467 1007 aaPredicted RBP16.15■□□□□ 0.18
C11orf54-210ENST00000531516 TCERG1O14776 1098 aaKnown RBP16.14■□□□□ 0.17
C11orf54-210ENST00000531516 PRELPP51888 382 aa16.14■□□□□ 0.17
C11orf54-210ENST00000531516 ISCA1Q9BUE6 129 aa16.14■□□□□ 0.17
C11orf54-210ENST00000531516 MYH16Q9H6N6 1097 aa16.14■□□□□ 0.17
C11orf54-210ENST00000531516 COL11A2P13942 1736 aaPredicted RBP16.14■□□□□ 0.17
C11orf54-210ENST00000531516 EIF6P56537 245 aaKnown RBP16.13■□□□□ 0.17
C11orf54-210ENST00000531516 ATP6V0A2Q9Y487 856 aa16.13■□□□□ 0.17
C11orf54-210ENST00000531516 NUP98P52948 1817 aa16.12■□□□□ 0.17
C11orf54-210ENST00000531516 LARGE2Q8N3Y3 721 aa16.12■□□□□ 0.17
C11orf54-210ENST00000531516 CCDC191Q8NCU4 936 aa16.12■□□□□ 0.17
C11orf54-210ENST00000531516 FAM89AQ96GI7 184 aa16.12■□□□□ 0.17
C11orf54-210ENST00000531516 MYD88Q99836 296 aa16.12■□□□□ 0.17
C11orf54-210ENST00000531516 VPS33BQ9H267 617 aa16.12■□□□□ 0.17
C11orf54-210ENST00000531516 PHAXQ9H814 394 aaKnown RBP16.12■□□□□ 0.17
C11orf54-210ENST00000531516 IRS4O14654 1257 aaPredicted RBP16.11■□□□□ 0.17
C11orf54-210ENST00000531516 GRAPQ13588 217 aa16.11■□□□□ 0.17
C11orf54-210ENST00000531516 OLFM4Q6UX06 510 aa16.11■□□□□ 0.17
C11orf54-210ENST00000531516 DPP8Q6V1X1 898 aaPredicted RBP16.11■□□□□ 0.17
C11orf54-210ENST00000531516 NIM1KQ8IY84 436 aa16.11■□□□□ 0.17
C11orf54-210ENST00000531516 ZBTB38Q8NAP3 1195 aaPredicted RBP16.11■□□□□ 0.17
C11orf54-210ENST00000531516 GRAPLQ8TC17 118 aaPredicted RBP16.11■□□□□ 0.17
C11orf54-210ENST00000531516 CWC25Q9NXE8 425 aaPredicted RBP16.11■□□□□ 0.17
C11orf54-210ENST00000531516 ABCC4O15439 1325 aa16.11■□□□□ 0.17
C11orf54-210ENST00000531516 SLX4Q8IY92 1834 aa16.1■□□□□ 0.17
C11orf54-210ENST00000531516 DDNO94850 711 aaPredicted RBP16.1■□□□□ 0.17
C11orf54-210ENST00000531516 KSR2Q6VAB6 950 aa16.1■□□□□ 0.17
C11orf54-210ENST00000531516 C3orf67Q6ZVT6 689 aa16.1■□□□□ 0.17
C11orf54-210ENST00000531516 SP8Q8IXZ3 490 aa16.1■□□□□ 0.17
C11orf54-210ENST00000531516 MPNDQ8N594 471 aa16.1■□□□□ 0.17
C11orf54-210ENST00000531516 TSPYL6Q8N831 410 aa16.1■□□□□ 0.17
C11orf54-210ENST00000531516 METTL22Q9BUU2 404 aaPredicted RBP16.1■□□□□ 0.17
C11orf54-210ENST00000531516 MAP3K2Q9Y2U5 619 aa16.1■□□□□ 0.17
C11orf54-210ENST00000531516 PPIP5K2O43314 1243 aa16.09■□□□□ 0.17
C11orf54-210ENST00000531516 SLC4A2P04920 1241 aa16.09■□□□□ 0.17
C11orf54-210ENST00000531516 SF3B3Q15393 1217 aaKnown RBP16.09■□□□□ 0.17
C11orf54-210ENST00000531516 RTL5Q5HYW3 569 aaPredicted RBP16.09■□□□□ 0.17
C11orf54-210ENST00000531516 FANCIQ9NVI1 1328 aa16.09■□□□□ 0.17
C11orf54-210ENST00000531516 TNRC6CQ9HCJ0 1690 aaKnown RBP16.08■□□□□ 0.17
C11orf54-210ENST00000531516 LMOD1P29536 600 aaPredicted RBP16.08■□□□□ 0.16
C11orf54-210ENST00000531516 CCDC152Q4G0S7 254 aa16.08■□□□□ 0.16
C11orf54-210ENST00000531516 GPC2Q8N158 579 aa16.08■□□□□ 0.16
C11orf54-210ENST00000531516 ZNF428Q96B54 188 aa16.08■□□□□ 0.16
C11orf54-210ENST00000531516 ARFGEF2Q9Y6D5 1785 aa16.08■□□□□ 0.16
C11orf54-210ENST00000531516 PI4KAP2A4QPH2 592 aa16.07■□□□□ 0.16
C11orf54-210ENST00000531516 FZD9O00144 591 aa16.07■□□□□ 0.16
C11orf54-210ENST00000531516 PCCAP05165 728 aaPredicted RBP16.07■□□□□ 0.16
C11orf54-210ENST00000531516 PI4KAP1Q8N8J0 262 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms