RNA–Protein interactions for RNA: ENST00000531319.1

AP004608.1-201, humanhuman

TSL 2 BASIC

Gene AP004608.1, Length 1,402 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-201ENST00000531319 F6X3S4 739 aa27.27■■□□□ 1.96
AP004608.1-201ENST00000531319 SYNE4Q8N205 404 aa27.27■■□□□ 1.96
AP004608.1-201ENST00000531319 BRCA1P38398 1863 aaKnown RBP27.27■■□□□ 1.96
AP004608.1-201ENST00000531319 DLEC1Q9Y238 1755 aa27.26■■□□□ 1.95
AP004608.1-201ENST00000531319 NYXQ9GZU5 481 aa27.26■■□□□ 1.95
AP004608.1-201ENST00000531319 ST5P78524 1137 aa27.25■■□□□ 1.95
AP004608.1-201ENST00000531319 DNAAF4Q8WXU2 420 aa27.25■■□□□ 1.95
AP004608.1-201ENST00000531319 UTP14AQ9BVJ6 771 aaKnown RBP27.25■■□□□ 1.95
AP004608.1-201ENST00000531319 SMC4Q9NTJ3 1288 aa27.25■■□□□ 1.95
AP004608.1-201ENST00000531319 RIC1Q4ADV7 1423 aa27.25■■□□□ 1.95
AP004608.1-201ENST00000531319 PPP1R42Q7Z4L9 355 aa27.24■■□□□ 1.95
AP004608.1-201ENST00000531319 YTHDC1Q96MU7 727 aaKnown RBP27.24■■□□□ 1.95
AP004608.1-201ENST00000531319 KLRG2A4D1S0 409 aaPredicted RBP27.24■■□□□ 1.95
AP004608.1-201ENST00000531319 BRPF1P55201 1214 aaPredicted RBP27.24■■□□□ 1.95
AP004608.1-201ENST00000531319 C3orf67Q6ZVT6 689 aa27.24■■□□□ 1.95
AP004608.1-201ENST00000531319 CWF19L2Q2TBE0 894 aaKnown RBP27.23■■□□□ 1.95
AP004608.1-201ENST00000531319 WWC3Q9ULE0 1092 aa27.23■■□□□ 1.95
AP004608.1-201ENST00000531319 NPHP1O15259 732 aa27.22■■□□□ 1.95
AP004608.1-201ENST00000531319 TRMT112Q9UI30 125 aaKnown RBP27.22■■□□□ 1.95
AP004608.1-201ENST00000531319 RNF123Q5XPI4 1314 aa27.22■■□□□ 1.95
AP004608.1-201ENST00000531319 DDX60Q8IY21 1712 aaKnown RBP27.21■■□□□ 1.95
AP004608.1-201ENST00000531319 YBX3P16989 372 aaKnown RBP eCLIP27.21■■□□□ 1.95
AP004608.1-201ENST00000531319 C2CD5Q86YS7 1000 aa27.21■■□□□ 1.95
AP004608.1-201ENST00000531319 CCDC191Q8NCU4 936 aa27.21■■□□□ 1.95
AP004608.1-201ENST00000531319 NEURL1BA8MQ27 555 aa27.2■■□□□ 1.94
AP004608.1-201ENST00000531319 BCAR3O75815 825 aa27.2■■□□□ 1.94
AP004608.1-201ENST00000531319 PDE6BP35913 854 aa27.2■■□□□ 1.94
AP004608.1-201ENST00000531319 SLC10A5Q5PT55 438 aa27.2■■□□□ 1.94
AP004608.1-201ENST00000531319 FAM89AQ96GI7 184 aa27.2■■□□□ 1.94
AP004608.1-201ENST00000531319 PTPRCP08575 1304 aa27.2■■□□□ 1.94
AP004608.1-201ENST00000531319 GTF2E1P29083 439 aaPredicted RBP27.19■■□□□ 1.94
AP004608.1-201ENST00000531319 BEND3Q5T5X7 828 aa27.19■■□□□ 1.94
AP004608.1-201ENST00000531319 CWC25Q9NXE8 425 aaPredicted RBP27.19■■□□□ 1.94
AP004608.1-201ENST00000531319 SH3TC1Q8TE82 1336 aa27.19■■□□□ 1.94
AP004608.1-201ENST00000531319 LAMB2P55268 1798 aa27.19■■□□□ 1.94
AP004608.1-201ENST00000531319 SRGNP10124 158 aa27.17■■□□□ 1.94
AP004608.1-201ENST00000531319 HCLS1P14317 486 aaPredicted RBP27.17■■□□□ 1.94
AP004608.1-201ENST00000531319 CRY2Q49AN0 593 aa27.17■■□□□ 1.94
AP004608.1-201ENST00000531319 LINS1Q8NG48 757 aa27.17■■□□□ 1.94
AP004608.1-201ENST00000531319 JARID2Q92833 1246 aaPredicted RBP27.17■■□□□ 1.94
AP004608.1-201ENST00000531319 NOB1Q9ULX3 412 aaKnown RBP27.17■■□□□ 1.94
AP004608.1-201ENST00000531319 H0YIN7 160 aa27.16■■□□□ 1.94
AP004608.1-201ENST00000531319 NEXNQ0ZGT2 675 aa27.16■■□□□ 1.94
AP004608.1-201ENST00000531319 RTL5Q5HYW3 569 aaPredicted RBP27.16■■□□□ 1.94
AP004608.1-201ENST00000531319 ZBTB38Q8NAP3 1195 aaPredicted RBP27.16■■□□□ 1.94
AP004608.1-201ENST00000531319 PCCAP05165 728 aaPredicted RBP27.15■■□□□ 1.94
AP004608.1-201ENST00000531319 GCKRQ14397 625 aa27.15■■□□□ 1.94
AP004608.1-201ENST00000531319 PIM2Q9P1W9 311 aa27.15■■□□□ 1.94
AP004608.1-201ENST00000531319 PDZRN3Q9UPQ7 1066 aa27.13■■□□□ 1.93
AP004608.1-201ENST00000531319 CASP7P55210 303 aa27.12■■□□□ 1.93
AP004608.1-201ENST00000531319 SLC4A10Q6U841 1118 aa27.12■■□□□ 1.93
AP004608.1-201ENST00000531319 PELP1Q8IZL8 1130 aaKnown RBP27.12■■□□□ 1.93
AP004608.1-201ENST00000531319 TNNQ9UQP3 1299 aa27.12■■□□□ 1.93
AP004608.1-201ENST00000531319 KIF16BQ96L93 1317 aa27.11■■□□□ 1.93
AP004608.1-201ENST00000531319 H7C1W4 665 aa27.11■■□□□ 1.93
AP004608.1-201ENST00000531319 IRS4O14654 1257 aaPredicted RBP27.11■■□□□ 1.93
AP004608.1-201ENST00000531319 STYK1Q6J9G0 422 aa27.11■■□□□ 1.93
AP004608.1-201ENST00000531319 MASTLQ96GX5 879 aa27.11■■□□□ 1.93
AP004608.1-201ENST00000531319 COL4A1P02462 1669 aa27.11■■□□□ 1.93
AP004608.1-201ENST00000531319 ARFGEF1Q9Y6D6 1849 aa27.1■■□□□ 1.93
AP004608.1-201ENST00000531319 NPR1P16066 1061 aa27.1■■□□□ 1.93
AP004608.1-201ENST00000531319 GPR162Q16538 588 aa27.1■■□□□ 1.93
AP004608.1-201ENST00000531319 DALRD3Q5D0E6 543 aaKnown RBP27.1■■□□□ 1.93
AP004608.1-201ENST00000531319 BCS1LQ9Y276 419 aa27.1■■□□□ 1.93
AP004608.1-201ENST00000531319 CDHR2Q9BYE9 1310 aa27.09■■□□□ 1.93
AP004608.1-201ENST00000531319 ZNF622Q969S3 477 aaKnown RBP eCLIP27.09■■□□□ 1.93
AP004608.1-201ENST00000531319 SLX4Q8IY92 1834 aa27.09■■□□□ 1.93
AP004608.1-201ENST00000531319 HOXA10P31260 410 aaPredicted RBP27.08■■□□□ 1.93
AP004608.1-201ENST00000531319 UBE3BQ7Z3V4 1068 aa27.08■■□□□ 1.93
AP004608.1-201ENST00000531319 TTLL6Q8N841 843 aa27.08■■□□□ 1.93
AP004608.1-201ENST00000531319 ARHGAP45Q92619 1136 aa27.08■■□□□ 1.93
AP004608.1-201ENST00000531319 NLRP3Q96P20 1036 aa27.08■■□□□ 1.93
AP004608.1-201ENST00000531319 SRCIN1Q9C0H9 1055 aa27.08■■□□□ 1.93
AP004608.1-201ENST00000531319 CACNA1SQ13698 1873 aa27.08■■□□□ 1.93
AP004608.1-201ENST00000531319 ALDH1L1O75891 902 aa27.07■■□□□ 1.92
AP004608.1-201ENST00000531319 TRIM27P14373 513 aa27.07■■□□□ 1.92
AP004608.1-201ENST00000531319 SLC51AQ86UW1 340 aa27.07■■□□□ 1.92
AP004608.1-201ENST00000531319 ABCC4O15439 1325 aa27.06■■□□□ 1.92
AP004608.1-201ENST00000531319 PRPF40BQ6NWY9 871 aaKnown RBP27.06■■□□□ 1.92
AP004608.1-201ENST00000531319 API5Q9BZZ5 524 aaKnown RBP27.06■■□□□ 1.92
AP004608.1-201ENST00000531319 SF3B3Q15393 1217 aaKnown RBP27.05■■□□□ 1.92
AP004608.1-201ENST00000531319 FRAT1Q92837 279 aaPredicted RBP27.05■■□□□ 1.92
AP004608.1-201ENST00000531319 ATF7IPQ6VMQ6 1270 aa27.04■■□□□ 1.92
AP004608.1-201ENST00000531319 C7orf43Q8WVR3 580 aa27.04■■□□□ 1.92
AP004608.1-201ENST00000531319 RPGRQ92834 1020 aaKnown RBP27.04■■□□□ 1.92
AP004608.1-201ENST00000531319 CNKSR1Q969H4 720 aa27.04■■□□□ 1.92
AP004608.1-201ENST00000531319 TAF1P21675 1872 aa27.03■■□□□ 1.92
AP004608.1-201ENST00000531319 GRM8O00222 908 aa27.03■■□□□ 1.92
AP004608.1-201ENST00000531319 UTYO14607 1347 aa27.03■■□□□ 1.92
AP004608.1-201ENST00000531319 PDE8AO60658 829 aa27.02■■□□□ 1.92
AP004608.1-201ENST00000531319 CRAMP1Q96RY5 1269 aa27.02■■□□□ 1.92
AP004608.1-201ENST00000531319 NBPF7P0C2Y1 421 aaPredicted RBP27.01■■□□□ 1.91
AP004608.1-201ENST00000531319 OLFM4Q6UX06 510 aa27.01■■□□□ 1.91
AP004608.1-201ENST00000531319 PLA2G12BQ9BX93 195 aa27.01■■□□□ 1.91
AP004608.1-201ENST00000531319 RCAN3Q9UKA8 241 aa27.01■■□□□ 1.91
AP004608.1-201ENST00000531319 RBM17Q96I25 401 aaKnown RBP27■■□□□ 1.91
AP004608.1-201ENST00000531319 USP44Q9H0E7 712 aa27■■□□□ 1.91
AP004608.1-201ENST00000531319 SNED1Q8TER0 1413 aa27■■□□□ 1.91
AP004608.1-201ENST00000531319 IPO8O15397 1037 aaKnown RBP26.99■■□□□ 1.91
AP004608.1-201ENST00000531319 C21orf2O43822 256 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms