RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 COL11A2P13942 1736 aaPredicted RBP20.91■□□□□ 0.94
RELA-216ENST00000531238 RIC3Q7Z5B4 369 aa20.91■□□□□ 0.94
RELA-216ENST00000531238 IBTKQ9P2D0 1353 aaPredicted RBP20.91■□□□□ 0.94
RELA-216ENST00000531238 PRELPP51888 382 aa20.9■□□□□ 0.94
RELA-216ENST00000531238 SLFN5Q08AF3 891 aa20.9■□□□□ 0.94
RELA-216ENST00000531238 CRY2Q49AN0 593 aa20.9■□□□□ 0.94
RELA-216ENST00000531238 ZNF784Q8NCA9 323 aaPredicted RBP20.9■□□□□ 0.94
RELA-216ENST00000531238 CHMP4AQ9BY43 222 aa20.9■□□□□ 0.94
RELA-216ENST00000531238 ZNF219Q9P2Y4 722 aaPredicted RBP20.9■□□□□ 0.94
RELA-216ENST00000531238 DLEC1Q9Y238 1755 aa20.9■□□□□ 0.94
RELA-216ENST00000531238 C21orf2O43822 256 aa20.89■□□□□ 0.93
RELA-216ENST00000531238 NPR1P16066 1061 aa20.89■□□□□ 0.93
RELA-216ENST00000531238 TRIM28Q13263 835 aaKnown RBP20.89■□□□□ 0.93
RELA-216ENST00000531238 C7orf43Q8WVR3 580 aa20.89■□□□□ 0.93
RELA-216ENST00000531238 ARFGEF1Q9Y6D6 1849 aa20.88■□□□□ 0.93
RELA-216ENST00000531238 HCLS1P14317 486 aaPredicted RBP20.88■□□□□ 0.93
RELA-216ENST00000531238 PRPF40BQ6NWY9 871 aaKnown RBP20.88■□□□□ 0.93
RELA-216ENST00000531238 CNKSR1Q969H4 720 aa20.88■□□□□ 0.93
RELA-216ENST00000531238 MYD88Q99836 296 aa20.88■□□□□ 0.93
RELA-216ENST00000531238 STK31Q9BXU1 1019 aa20.88■□□□□ 0.93
RELA-216ENST00000531238 TRMT112Q9UI30 125 aaKnown RBP20.88■□□□□ 0.93
RELA-216ENST00000531238 TNRC6CQ9HCJ0 1690 aaKnown RBP20.87■□□□□ 0.93
RELA-216ENST00000531238 PI4KAP2A4QPH2 592 aa20.87■□□□□ 0.93
RELA-216ENST00000531238 RASSF7Q02833 373 aa20.87■□□□□ 0.93
RELA-216ENST00000531238 KSR2Q6VAB6 950 aa20.87■□□□□ 0.93
RELA-216ENST00000531238 TRMT2AQ8IZ69 625 aaKnown RBP20.87■□□□□ 0.93
RELA-216ENST00000531238 PI4KAP1Q8N8J0 262 aa20.87■□□□□ 0.93
RELA-216ENST00000531238 METTL22Q9BUU2 404 aaPredicted RBP20.87■□□□□ 0.93
RELA-216ENST00000531238 MAP3K2Q9Y2U5 619 aa20.87■□□□□ 0.93
RELA-216ENST00000531238 SLX4Q8IY92 1834 aa20.86■□□□□ 0.93
RELA-216ENST00000531238 NFKBIEO00221 500 aa20.86■□□□□ 0.93
RELA-216ENST00000531238 OLFM4Q6UX06 510 aa20.86■□□□□ 0.93
RELA-216ENST00000531238 FAM89AQ96GI7 184 aa20.86■□□□□ 0.93
RELA-216ENST00000531238 ADCY9O60503 1353 aa20.85■□□□□ 0.93
RELA-216ENST00000531238 E9PSI1 815 aa20.85■□□□□ 0.93
RELA-216ENST00000531238 HOXA10P31260 410 aaPredicted RBP20.85■□□□□ 0.93
RELA-216ENST00000531238 SLC51AQ86UW1 340 aa20.85■□□□□ 0.93
RELA-216ENST00000531238 RIC1Q4ADV7 1423 aa20.85■□□□□ 0.93
RELA-216ENST00000531238 DDX58O95786 925 aaKnown RBP20.84■□□□□ 0.93
RELA-216ENST00000531238 IGKV5-2P06315 115 aa20.84■□□□□ 0.93
RELA-216ENST00000531238 FLIIQ13045 1269 aa20.84■□□□□ 0.93
RELA-216ENST00000531238 RTL5Q5HYW3 569 aaPredicted RBP20.84■□□□□ 0.93
RELA-216ENST00000531238 C9orf131Q5VYM1 1079 aa20.84■□□□□ 0.93
RELA-216ENST00000531238 JARID2Q92833 1246 aaPredicted RBP20.84■□□□□ 0.93
RELA-216ENST00000531238 NLRP3Q96P20 1036 aa20.84■□□□□ 0.93
RELA-216ENST00000531238 ANKRD36CQ5JPF3 1778 aa20.84■□□□□ 0.93
RELA-216ENST00000531238 SH3TC1Q8TE82 1336 aa20.83■□□□□ 0.93
RELA-216ENST00000531238 ARFGEF2Q9Y6D5 1785 aa20.82■□□□□ 0.92
RELA-216ENST00000531238 RNF123Q5XPI4 1314 aa20.82■□□□□ 0.92
RELA-216ENST00000531238 ALDH1B1P30837 517 aa20.82■□□□□ 0.92
RELA-216ENST00000531238 CCDC191Q8NCU4 936 aa20.81■□□□□ 0.92
RELA-216ENST00000531238 ZBTB38Q8NAP3 1195 aaPredicted RBP20.8■□□□□ 0.92
RELA-216ENST00000531238 RPGRQ92834 1020 aaKnown RBP20.8■□□□□ 0.92
RELA-216ENST00000531238 CRAMP1Q96RY5 1269 aa20.8■□□□□ 0.92
RELA-216ENST00000531238 CWF19L2Q2TBE0 894 aaKnown RBP20.79■□□□□ 0.92
RELA-216ENST00000531238 RBM17Q96I25 401 aaKnown RBP20.79■□□□□ 0.92
RELA-216ENST00000531238 CWC25Q9NXE8 425 aaPredicted RBP20.79■□□□□ 0.92
RELA-216ENST00000531238 RNF181Q9P0P0 153 aa20.79■□□□□ 0.92
RELA-216ENST00000531238 IRS4O14654 1257 aaPredicted RBP20.78■□□□□ 0.92
RELA-216ENST00000531238 FKBP5Q13451 457 aaPredicted RBP20.78■□□□□ 0.92
RELA-216ENST00000531238 MRPL50Q8N5N7 158 aaKnown RBP20.78■□□□□ 0.92
RELA-216ENST00000531238 NEURL1BA8MQ27 555 aa20.77■□□□□ 0.92
RELA-216ENST00000531238 F6X3S4 739 aa20.77■□□□□ 0.92
RELA-216ENST00000531238 PCCAP05165 728 aaPredicted RBP20.77■□□□□ 0.92
RELA-216ENST00000531238 LMNB1P20700 586 aa20.77■□□□□ 0.92
RELA-216ENST00000531238 SF3B3Q15393 1217 aaKnown RBP20.77■□□□□ 0.92
RELA-216ENST00000531238 ZNF526Q8TF50 670 aaPredicted RBP20.77■□□□□ 0.92
RELA-216ENST00000531238 SBF1O95248 1867 aa20.77■□□□□ 0.92
RELA-216ENST00000531238 ABCC4O15439 1325 aa20.77■□□□□ 0.91
RELA-216ENST00000531238 CACNA1SQ13698 1873 aa20.76■□□□□ 0.91
RELA-216ENST00000531238 DNAAF4Q8WXU2 420 aa20.76■□□□□ 0.91
RELA-216ENST00000531238 SSH1Q8WYL5 1049 aa20.76■□□□□ 0.91
RELA-216ENST00000531238 CCDC93Q567U6 631 aa20.75■□□□□ 0.91
RELA-216ENST00000531238 SNED1Q8TER0 1413 aa20.75■□□□□ 0.91
RELA-216ENST00000531238 LTBP3Q9NS15 1303 aa20.75■□□□□ 0.91
RELA-216ENST00000531238 H7C1W4 665 aa20.74■□□□□ 0.91
RELA-216ENST00000531238 FER1L6Q2WGJ9 1857 aa20.74■□□□□ 0.91
RELA-216ENST00000531238 TAOK3Q9H2K8 898 aa20.74■□□□□ 0.91
RELA-216ENST00000531238 DDX60Q8IY21 1712 aaKnown RBP20.73■□□□□ 0.91
RELA-216ENST00000531238 PPEF1O14829 653 aaPredicted RBP20.73■□□□□ 0.91
RELA-216ENST00000531238 NEXNQ0ZGT2 675 aa20.73■□□□□ 0.91
RELA-216ENST00000531238 GCKRQ14397 625 aa20.73■□□□□ 0.91
RELA-216ENST00000531238 BEND3Q5T5X7 828 aa20.73■□□□□ 0.91
RELA-216ENST00000531238 SOGA3Q5TF21 947 aa20.73■□□□□ 0.91
RELA-216ENST00000531238 LAMB2P55268 1798 aa20.72■□□□□ 0.91
RELA-216ENST00000531238 BBOX1O75936 387 aa20.72■□□□□ 0.91
RELA-216ENST00000531238 CASP7P55210 303 aa20.72■□□□□ 0.91
RELA-216ENST00000531238 HNRNPUQ00839 825 aaKnown RBP eCLIP20.72■□□□□ 0.91
RELA-216ENST00000531238 FKBP4Q02790 459 aaKnown RBP eCLIP20.72■□□□□ 0.91
RELA-216ENST00000531238 DDX46Q7L014 1031 aaKnown RBP20.72■□□□□ 0.91
RELA-216ENST00000531238 RTKN2Q8IZC4 609 aa20.72■□□□□ 0.91
RELA-216ENST00000531238 LINS1Q8NG48 757 aa20.72■□□□□ 0.91
RELA-216ENST00000531238 CELF1Q92879 486 aaKnown RBP20.72■□□□□ 0.91
RELA-216ENST00000531238 COL4A1P02462 1669 aa20.71■□□□□ 0.91
RELA-216ENST00000531238 GRAPQ13588 217 aa20.71■□□□□ 0.91
RELA-216ENST00000531238 GRAPLQ8TC17 118 aaPredicted RBP20.71■□□□□ 0.91
RELA-216ENST00000531238 BCL2L13Q9BXK5 485 aa20.71■□□□□ 0.91
RELA-216ENST00000531238 SEC31BQ9NQW1 1179 aa20.71■□□□□ 0.91
RELA-216ENST00000531238 ZNF277Q9NRM2 450 aaPredicted RBP20.71■□□□□ 0.91
RELA-216ENST00000531238 ATP6V0A2Q9Y487 856 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms