RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 RASSF7Q02833 373 aa24.1■■□□□ 1.45
GMDS-208ENST00000530927 HSP90AB3PQ58FF7 597 aa24.1■■□□□ 1.45
GMDS-208ENST00000530927 PPP1R42Q7Z4L9 355 aa24.1■■□□□ 1.45
GMDS-208ENST00000530927 RIC3Q7Z5B4 369 aa24.1■■□□□ 1.45
GMDS-208ENST00000530927 ZNF784Q8NCA9 323 aaPredicted RBP24.1■■□□□ 1.45
GMDS-208ENST00000530927 CDCA7LQ96GN5 454 aa24.1■■□□□ 1.45
GMDS-208ENST00000530927 MASTLQ96GX5 879 aa24.1■■□□□ 1.45
GMDS-208ENST00000530927 MYH16Q9H6N6 1097 aa24.1■■□□□ 1.45
GMDS-208ENST00000530927 STYK1Q6J9G0 422 aa24.1■■□□□ 1.45
GMDS-208ENST00000530927 SLC51AQ86UW1 340 aa24.1■■□□□ 1.45
GMDS-208ENST00000530927 ISCA1Q9BUE6 129 aa24.1■■□□□ 1.45
GMDS-208ENST00000530927 C21orf2O43822 256 aa24.09■■□□□ 1.45
GMDS-208ENST00000530927 SLC4A2P04920 1241 aa24.09■■□□□ 1.45
GMDS-208ENST00000530927 PRPF40BQ6NWY9 871 aaKnown RBP24.09■■□□□ 1.45
GMDS-208ENST00000530927 STK31Q9BXU1 1019 aa24.09■■□□□ 1.45
GMDS-208ENST00000530927 HCLS1P14317 486 aaPredicted RBP24.08■■□□□ 1.44
GMDS-208ENST00000530927 PRELPP51888 382 aa24.08■■□□□ 1.44
GMDS-208ENST00000530927 OLFM4Q6UX06 510 aa24.08■■□□□ 1.44
GMDS-208ENST00000530927 MYD88Q99836 296 aa24.08■■□□□ 1.44
GMDS-208ENST00000530927 PDZRN3Q9UPQ7 1066 aa24.08■■□□□ 1.44
GMDS-208ENST00000530927 ADCY9O60503 1353 aa24.07■■□□□ 1.44
GMDS-208ENST00000530927 NPR1P16066 1061 aa24.07■■□□□ 1.44
GMDS-208ENST00000530927 RTL5Q5HYW3 569 aaPredicted RBP24.07■■□□□ 1.44
GMDS-208ENST00000530927 TRMT112Q9UI30 125 aaKnown RBP24.07■■□□□ 1.44
GMDS-208ENST00000530927 LAMB2P55268 1798 aa24.06■■□□□ 1.44
GMDS-208ENST00000530927 CNKSR1Q969H4 720 aa24.06■■□□□ 1.44
GMDS-208ENST00000530927 MAP3K2Q9Y2U5 619 aa24.06■■□□□ 1.44
GMDS-208ENST00000530927 CRY2Q49AN0 593 aa24.05■■□□□ 1.44
GMDS-208ENST00000530927 FAM89AQ96GI7 184 aa24.05■■□□□ 1.44
GMDS-208ENST00000530927 RIC1Q4ADV7 1423 aa24.05■■□□□ 1.44
GMDS-208ENST00000530927 PI4KAP2A4QPH2 592 aa24.04■■□□□ 1.44
GMDS-208ENST00000530927 NFKBIEO00221 500 aa24.04■■□□□ 1.44
GMDS-208ENST00000530927 SLFN5Q08AF3 891 aa24.04■■□□□ 1.44
GMDS-208ENST00000530927 PI4KAP1Q8N8J0 262 aa24.04■■□□□ 1.44
GMDS-208ENST00000530927 JARID2Q92833 1246 aaPredicted RBP24.04■■□□□ 1.44
GMDS-208ENST00000530927 DDX60Q8IY21 1712 aaKnown RBP24.04■■□□□ 1.44
GMDS-208ENST00000530927 C9orf131Q5VYM1 1079 aa24.03■■□□□ 1.44
GMDS-208ENST00000530927 ZNF526Q8TF50 670 aaPredicted RBP24.03■■□□□ 1.44
GMDS-208ENST00000530927 SBF1O95248 1867 aa24.03■■□□□ 1.44
GMDS-208ENST00000530927 E9PSI1 815 aa24.02■■□□□ 1.44
GMDS-208ENST00000530927 FLIIQ13045 1269 aa24.02■■□□□ 1.44
GMDS-208ENST00000530927 SLC10A5Q5PT55 438 aa24.02■■□□□ 1.44
GMDS-208ENST00000530927 METTL22Q9BUU2 404 aaPredicted RBP24.02■■□□□ 1.44
GMDS-208ENST00000530927 SH3TC1Q8TE82 1336 aa24.02■■□□□ 1.44
GMDS-208ENST00000530927 DDX58O95786 925 aaKnown RBP24.01■■□□□ 1.43
GMDS-208ENST00000530927 KSR2Q6VAB6 950 aa24.01■■□□□ 1.43
GMDS-208ENST00000530927 C7orf43Q8WVR3 580 aa24.01■■□□□ 1.43
GMDS-208ENST00000530927 CHMP4AQ9BY43 222 aa24.01■■□□□ 1.43
GMDS-208ENST00000530927 IGKV5-2P06315 115 aa24.01■■□□□ 1.43
GMDS-208ENST00000530927 RPGRQ92834 1020 aaKnown RBP24.01■■□□□ 1.43
GMDS-208ENST00000530927 RNF181Q9P0P0 153 aa24.01■■□□□ 1.43
GMDS-208ENST00000530927 FER1L6Q2WGJ9 1857 aa24■■□□□ 1.43
GMDS-208ENST00000530927 TRIM28Q13263 835 aaKnown RBP24■■□□□ 1.43
GMDS-208ENST00000530927 NLRP3Q96P20 1036 aa24■■□□□ 1.43
GMDS-208ENST00000530927 FKBP5Q13451 457 aaPredicted RBP23.99■■□□□ 1.43
GMDS-208ENST00000530927 CWF19L2Q2TBE0 894 aaKnown RBP23.99■■□□□ 1.43
GMDS-208ENST00000530927 COL4A1P02462 1669 aa23.99■■□□□ 1.43
GMDS-208ENST00000530927 RNF123Q5XPI4 1314 aa23.99■■□□□ 1.43
GMDS-208ENST00000530927 TAF1P21675 1872 aa23.98■■□□□ 1.43
GMDS-208ENST00000530927 HOXA10P31260 410 aaPredicted RBP23.98■■□□□ 1.43
GMDS-208ENST00000530927 CCDC88AQ3V6T2 1871 aa23.98■■□□□ 1.43
GMDS-208ENST00000530927 F6X3S4 739 aa23.97■■□□□ 1.43
GMDS-208ENST00000530927 ALDH1B1P30837 517 aa23.96■■□□□ 1.43
GMDS-208ENST00000530927 TRMT2AQ8IZ69 625 aaKnown RBP23.96■■□□□ 1.43
GMDS-208ENST00000530927 RBM17Q96I25 401 aaKnown RBP23.96■■□□□ 1.43
GMDS-208ENST00000530927 CWC25Q9NXE8 425 aaPredicted RBP23.96■■□□□ 1.43
GMDS-208ENST00000530927 ABCC4O15439 1325 aa23.96■■□□□ 1.43
GMDS-208ENST00000530927 IRS4O14654 1257 aaPredicted RBP23.95■■□□□ 1.42
GMDS-208ENST00000530927 ZBTB38Q8NAP3 1195 aaPredicted RBP23.95■■□□□ 1.42
GMDS-208ENST00000530927 CCDC191Q8NCU4 936 aa23.95■■□□□ 1.42
GMDS-208ENST00000530927 CACNA1FO60840 1977 aa23.95■■□□□ 1.42
GMDS-208ENST00000530927 SNED1Q8TER0 1413 aa23.94■■□□□ 1.42
GMDS-208ENST00000530927 NEURL1BA8MQ27 555 aa23.93■■□□□ 1.42
GMDS-208ENST00000530927 LMNB1P20700 586 aa23.93■■□□□ 1.42
GMDS-208ENST00000530927 HNRNPUQ00839 825 aaKnown RBP eCLIP23.93■■□□□ 1.42
GMDS-208ENST00000530927 CCDC93Q567U6 631 aa23.93■■□□□ 1.42
GMDS-208ENST00000530927 CRAMP1Q96RY5 1269 aa23.93■■□□□ 1.42
GMDS-208ENST00000530927 BCL2L13Q9BXK5 485 aa23.93■■□□□ 1.42
GMDS-208ENST00000530927 TIAM2Q8IVF5 1701 aa23.93■■□□□ 1.42
GMDS-208ENST00000530927 PPEF1O14829 653 aaPredicted RBP23.93■■□□□ 1.42
GMDS-208ENST00000530927 DNAAF4Q8WXU2 420 aa23.93■■□□□ 1.42
GMDS-208ENST00000530927 TAOK3Q9H2K8 898 aa23.93■■□□□ 1.42
GMDS-208ENST00000530927 PCCAP05165 728 aaPredicted RBP23.92■■□□□ 1.42
GMDS-208ENST00000530927 NEXNQ0ZGT2 675 aa23.91■■□□□ 1.42
GMDS-208ENST00000530927 MRPL50Q8N5N7 158 aaKnown RBP23.91■■□□□ 1.42
GMDS-208ENST00000530927 SSH1Q8WYL5 1049 aa23.91■■□□□ 1.42
GMDS-208ENST00000530927 CCDC85AQ96PX6 553 aaPredicted RBP23.91■■□□□ 1.42
GMDS-208ENST00000530927 ZNF277Q9NRM2 450 aaPredicted RBP23.91■■□□□ 1.42
GMDS-208ENST00000530927 SOGA3Q5TF21 947 aa23.89■■□□□ 1.41
GMDS-208ENST00000530927 DDX46Q7L014 1031 aaKnown RBP23.89■■□□□ 1.41
GMDS-208ENST00000530927 GPBP1L1Q9HC44 474 aaPredicted RBP23.89■■□□□ 1.41
GMDS-208ENST00000530927 LTBP3Q9NS15 1303 aa23.88■■□□□ 1.41
GMDS-208ENST00000530927 FKBP4Q02790 459 aaKnown RBP eCLIP23.88■■□□□ 1.41
GMDS-208ENST00000530927 SF3B3Q15393 1217 aaKnown RBP23.88■■□□□ 1.41
GMDS-208ENST00000530927 CELF1Q92879 486 aaKnown RBP23.88■■□□□ 1.41
GMDS-208ENST00000530927 GRAPQ13588 217 aa23.87■■□□□ 1.41
GMDS-208ENST00000530927 UBE3BQ7Z3V4 1068 aa23.87■■□□□ 1.41
GMDS-208ENST00000530927 GRAPLQ8TC17 118 aaPredicted RBP23.87■■□□□ 1.41
GMDS-208ENST00000530927 SEC31BQ9NQW1 1179 aa23.87■■□□□ 1.41
GMDS-208ENST00000530927 DICER1Q9UPY3 1922 aaKnown RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms