RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 RIMBP3BA6NNM3 1639 aa15□□□□□ -0.01
BDNF-215ENST00000530861 RIMBP3Q9UFD9 1639 aa15□□□□□ -0.01
BDNF-215ENST00000530861 RBM10P98175 930 aaKnown RBP15□□□□□ -0.01
BDNF-215ENST00000530861 ERCC4Q92889 916 aaPredicted RBP15□□□□□ -0.01
BDNF-215ENST00000530861 LIMCH1Q9UPQ0 1083 aa15□□□□□ -0.01
BDNF-215ENST00000530861 A0A0D9SFI3 127 aa14.99□□□□□ -0.01
BDNF-215ENST00000530861 R3HCC1Q9Y3T6 440 aaKnown RBP14.99□□□□□ -0.01
BDNF-215ENST00000530861 CPSF1Q10570 1443 aaKnown RBP14.99□□□□□ -0.01
BDNF-215ENST00000530861 MYO3AQ8NEV4 1616 aa14.99□□□□□ -0.01
BDNF-215ENST00000530861 ZNF592Q92610 1267 aa14.99□□□□□ -0.01
BDNF-215ENST00000530861 IQGAP1P46940 1657 aa14.99□□□□□ -0.01
BDNF-215ENST00000530861 TTLL5Q6EMB2 1281 aa14.99□□□□□ -0.01
BDNF-215ENST00000530861 DCAF5Q96JK2 942 aa14.99□□□□□ -0.01
BDNF-215ENST00000530861 HTATSF1O43719 755 aaKnown RBP14.98□□□□□ -0.01
BDNF-215ENST00000530861 ERBB3P21860 1342 aa14.98□□□□□ -0.01
BDNF-215ENST00000530861 NEURL1BA8MQ27 555 aa14.98□□□□□ -0.01
BDNF-215ENST00000530861 RAB3GAP1Q15042 981 aa14.98□□□□□ -0.01
BDNF-215ENST00000530861 USP48Q86UV5 1035 aa14.98□□□□□ -0.01
BDNF-215ENST00000530861 USP25Q9UHP3 1055 aa14.98□□□□□ -0.01
BDNF-215ENST00000530861 NSFL1CQ9UNZ2 370 aaKnown RBP14.98□□□□□ -0.01
BDNF-215ENST00000530861 SNX14Q9Y5W7 946 aa14.98□□□□□ -0.01
BDNF-215ENST00000530861 ATP7BP35670 1465 aa14.98□□□□□ -0.01
BDNF-215ENST00000530861 EVI5LQ96CN4 794 aa14.98□□□□□ -0.01
BDNF-215ENST00000530861 KIF2CQ99661 725 aa14.98□□□□□ -0.01
BDNF-215ENST00000530861 PSMA5P28066 241 aa14.97□□□□□ -0.01
BDNF-215ENST00000530861 ATP6V1AP38606 617 aa14.97□□□□□ -0.01
BDNF-215ENST00000530861 SSH3Q8TE77 659 aa14.97□□□□□ -0.01
BDNF-215ENST00000530861 LRP2BPQ9P2M1 347 aa14.97□□□□□ -0.01
BDNF-215ENST00000530861 MIGA1Q8NAN2 632 aa14.97□□□□□ -0.01
BDNF-215ENST00000530861 SDF4Q9BRK5 362 aa14.97□□□□□ -0.01
BDNF-215ENST00000530861 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.97□□□□□ -0.01
BDNF-215ENST00000530861 STX6O43752 255 aa14.97□□□□□ -0.01
BDNF-215ENST00000530861 IGKV5-2P06315 115 aa14.97□□□□□ -0.01
BDNF-215ENST00000530861 ME1P48163 572 aa14.97□□□□□ -0.01
BDNF-215ENST00000530861 ZSCAN23Q3MJ62 389 aa14.97□□□□□ -0.01
BDNF-215ENST00000530861 FAM13BQ9NYF5 915 aa14.97□□□□□ -0.01
BDNF-215ENST00000530861 WDR33Q9C0J8 1336 aaKnown RBP14.96□□□□□ -0.01
BDNF-215ENST00000530861 CWC22Q9HCG8 908 aaKnown RBP14.96□□□□□ -0.01
BDNF-215ENST00000530861 APOBRQ0VD83 1088 aa14.96□□□□□ -0.01
BDNF-215ENST00000530861 CREB3L3Q68CJ9 461 aa14.96□□□□□ -0.01
BDNF-215ENST00000530861 ZKSCAN3Q9BRR0 538 aa14.96□□□□□ -0.01
BDNF-215ENST00000530861 RAI14Q9P0K7 980 aa14.96□□□□□ -0.01
BDNF-215ENST00000530861 A0A087WWV3 80 aa14.96□□□□□ -0.02
BDNF-215ENST00000530861 SASH1O94885 1247 aa14.96□□□□□ -0.02
BDNF-215ENST00000530861 HSP90AA4PQ58FG1 418 aa14.96□□□□□ -0.02
BDNF-215ENST00000530861 ARHGEF10O15013 1369 aa14.96□□□□□ -0.02
BDNF-215ENST00000530861 BECN2A8MW95 431 aa14.95□□□□□ -0.02
BDNF-215ENST00000530861 JAK2O60674 1132 aa14.95□□□□□ -0.02
BDNF-215ENST00000530861 LARGE1O95461 756 aa14.95□□□□□ -0.02
BDNF-215ENST00000530861 ZNF589Q86UQ0 364 aaPredicted RBP14.95□□□□□ -0.02
BDNF-215ENST00000530861 SNX21Q969T3 373 aa14.95□□□□□ -0.02
BDNF-215ENST00000530861 METTL22Q9BUU2 404 aaPredicted RBP14.95□□□□□ -0.02
BDNF-215ENST00000530861 SGSM2O43147 1006 aa14.95□□□□□ -0.02
BDNF-215ENST00000530861 ATP6V1DQ9Y5K8 247 aa14.95□□□□□ -0.02
BDNF-215ENST00000530861 A0A1B0GUL7 405 aa14.95□□□□□ -0.02
BDNF-215ENST00000530861 SYT1P21579 422 aa14.95□□□□□ -0.02
BDNF-215ENST00000530861 KIAA2012Q0VF49 1180 aa14.95□□□□□ -0.02
BDNF-215ENST00000530861 Q6ZUG5 572 aa14.95□□□□□ -0.02
BDNF-215ENST00000530861 FAM43AQ8N2R8 423 aa14.95□□□□□ -0.02
BDNF-215ENST00000530861 CIZ1Q9ULV3 898 aaPredicted RBP14.95□□□□□ -0.02
BDNF-215ENST00000530861 LMTK2Q8IWU2 1503 aa14.94□□□□□ -0.02
BDNF-215ENST00000530861 BIN1O00499 593 aa14.94□□□□□ -0.02
BDNF-215ENST00000530861 MICU3Q86XE3 530 aa14.94□□□□□ -0.02
BDNF-215ENST00000530861 RRAGDQ9NQL2 400 aaPredicted RBP14.94□□□□□ -0.02
BDNF-215ENST00000530861 ZBTB9Q96C00 473 aa14.94□□□□□ -0.02
BDNF-215ENST00000530861 SPATA32Q96LK8 384 aa14.94□□□□□ -0.02
BDNF-215ENST00000530861 NRXN1Q9ULB1 1477 aa14.94□□□□□ -0.02
BDNF-215ENST00000530861 ESPNB1AK53 854 aa14.94□□□□□ -0.02
BDNF-215ENST00000530861 FAM98CQ17RN3 349 aaKnown RBP14.94□□□□□ -0.02
BDNF-215ENST00000530861 RASSF8Q8NHQ8 419 aa14.94□□□□□ -0.02
BDNF-215ENST00000530861 ALDH1L1O75891 902 aa14.93□□□□□ -0.02
BDNF-215ENST00000530861 ADORA1P30542 326 aa14.93□□□□□ -0.02
BDNF-215ENST00000530861 KLHL34Q8N239 644 aa14.93□□□□□ -0.02
BDNF-215ENST00000530861 TAF6LQ9Y6J9 622 aa14.93□□□□□ -0.02
BDNF-215ENST00000530861 G3V3G9 751 aa14.93□□□□□ -0.02
BDNF-215ENST00000530861 MCM2P49736 904 aa14.93□□□□□ -0.02
BDNF-215ENST00000530861 DCAF8Q5TAQ9 597 aa14.93□□□□□ -0.02
BDNF-215ENST00000530861 VPS53Q5VIR6 699 aa14.93□□□□□ -0.02
BDNF-215ENST00000530861 MYL10Q9BUA6 226 aa14.93□□□□□ -0.02
BDNF-215ENST00000530861 DBNLQ9UJU6 430 aaKnown RBP14.93□□□□□ -0.02
BDNF-215ENST00000530861 TNNI3KQ59H18 835 aa14.93□□□□□ -0.02
BDNF-215ENST00000530861 SLC9C2Q5TAH2 1124 aa14.93□□□□□ -0.02
BDNF-215ENST00000530861 NEK1Q96PY6 1258 aa14.93□□□□□ -0.02
BDNF-215ENST00000530861 TSPY26PQ9H489 355 aa14.93□□□□□ -0.02
BDNF-215ENST00000530861 FPGT-TNNI3KV9GXZ4 949 aa14.93□□□□□ -0.02
BDNF-215ENST00000530861 DHX16O60231 1041 aaKnown RBP14.92□□□□□ -0.02
BDNF-215ENST00000530861 TDO2P48775 406 aa14.92□□□□□ -0.02
BDNF-215ENST00000530861 GPHNQ9NQX3 736 aaPredicted RBP14.92□□□□□ -0.02
BDNF-215ENST00000530861 PES1O00541 588 aaKnown RBP14.92□□□□□ -0.02
BDNF-215ENST00000530861 DZIP3Q86Y13 1208 aaKnown RBP14.92□□□□□ -0.02
BDNF-215ENST00000530861 POLR1AO95602 1720 aaPredicted RBP14.92□□□□□ -0.02
BDNF-215ENST00000530861 CDK12Q9NYV4 1490 aaPredicted RBP14.92□□□□□ -0.02
BDNF-215ENST00000530861 BRINP3Q76B58 766 aa14.92□□□□□ -0.02
BDNF-215ENST00000530861 NIP7Q9Y221 180 aaKnown RBP eCLIP14.92□□□□□ -0.02
BDNF-215ENST00000530861 VWDEQ8N2E2 1590 aa14.92□□□□□ -0.02
BDNF-215ENST00000530861 CFAP74Q9C0B2 1584 aa14.92□□□□□ -0.02
BDNF-215ENST00000530861 AIDAQ96BJ3 306 aa14.91□□□□□ -0.02
BDNF-215ENST00000530861 RBSNQ9H1K0 784 aa14.91□□□□□ -0.02
BDNF-215ENST00000530861 C17orf53Q8N3J3 647 aaPredicted RBP14.91□□□□□ -0.02
BDNF-215ENST00000530861 TRIM5Q9C035 493 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms