RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 JDP2Q8WYK2 163 aa7.17□□□□□ -1.26
VPS11-204ENST00000530809 FMNL2Q96PY5 1086 aa7.17□□□□□ -1.26
VPS11-204ENST00000530809 POLR3GLQ9BT43 218 aa7.17□□□□□ -1.26
VPS11-204ENST00000530809 PRKRIP1Q9H875 184 aaPredicted RBP7.17□□□□□ -1.26
VPS11-204ENST00000530809 PANK3Q9H999 370 aa7.17□□□□□ -1.26
VPS11-204ENST00000530809 KLRG2A4D1S0 409 aaPredicted RBP7.16□□□□□ -1.26
VPS11-204ENST00000530809 EIF6P56537 245 aaKnown RBP7.16□□□□□ -1.26
VPS11-204ENST00000530809 MTHFSDQ2M296 383 aaKnown RBP7.16□□□□□ -1.26
VPS11-204ENST00000530809 CC2D2BQ6DHV5 1058 aa7.16□□□□□ -1.26
VPS11-204ENST00000530809 TPTE2Q6XPS3 522 aa7.16□□□□□ -1.26
VPS11-204ENST00000530809 PAXIP1Q6ZW49 1069 aaPredicted RBP7.16□□□□□ -1.26
VPS11-204ENST00000530809 ZNF496Q96IT1 587 aaPredicted RBP7.16□□□□□ -1.26
VPS11-204ENST00000530809 GPR101Q96P66 508 aaPredicted RBP7.16□□□□□ -1.26
VPS11-204ENST00000530809 PSMD1Q99460 953 aa7.16□□□□□ -1.26
VPS11-204ENST00000530809 ZNF277Q9NRM2 450 aaPredicted RBP7.16□□□□□ -1.26
VPS11-204ENST00000530809 KNSTRNQ9Y448 316 aa7.16□□□□□ -1.26
VPS11-204ENST00000530809 HMOX1P09601 288 aa7.15□□□□□ -1.26
VPS11-204ENST00000530809 USP50Q70EL3 339 aaPredicted RBP7.15□□□□□ -1.26
VPS11-204ENST00000530809 HHIPL1Q96JK4 782 aa7.15□□□□□ -1.26
VPS11-204ENST00000530809 TLL2Q9Y6L7 1015 aa7.15□□□□□ -1.26
VPS11-204ENST00000530809 SNED1Q8TER0 1413 aa7.15□□□□□ -1.27
VPS11-204ENST00000530809 GNAT3A8MTJ3 354 aa7.14□□□□□ -1.27
VPS11-204ENST00000530809 DIAPH1O60610 1272 aaKnown RBP7.14□□□□□ -1.27
VPS11-204ENST00000530809 A1BGP04217 495 aa7.14□□□□□ -1.27
VPS11-204ENST00000530809 BRPF1P55201 1214 aaPredicted RBP7.14□□□□□ -1.27
VPS11-204ENST00000530809 RALBP1Q15311 655 aa7.14□□□□□ -1.27
VPS11-204ENST00000530809 RIC1Q4ADV7 1423 aa7.14□□□□□ -1.27
VPS11-204ENST00000530809 CYP4F22Q6NT55 531 aa7.14□□□□□ -1.27
VPS11-204ENST00000530809 SYNE4Q8N205 404 aa7.14□□□□□ -1.27
VPS11-204ENST00000530809 GAS2L2Q8NHY3 880 aa7.14□□□□□ -1.27
VPS11-204ENST00000530809 CEMIPQ8WUJ3 1361 aa7.14□□□□□ -1.27
VPS11-204ENST00000530809 CFAP44Q96MT7 982 aa7.14□□□□□ -1.27
VPS11-204ENST00000530809 MCOLN1Q9GZU1 580 aa7.14□□□□□ -1.27
VPS11-204ENST00000530809 ANKRD36CQ5JPF3 1778 aa7.13□□□□□ -1.27
VPS11-204ENST00000530809 COL4A5P29400 1685 aa7.13□□□□□ -1.27
VPS11-204ENST00000530809 GRM1Q13255 1194 aa7.13□□□□□ -1.27
VPS11-204ENST00000530809 NIP7Q9Y221 180 aaKnown RBP eCLIP7.13□□□□□ -1.27
VPS11-204ENST00000530809 GJA3Q9Y6H8 435 aa7.13□□□□□ -1.27
VPS11-204ENST00000530809 PDE4DIPQ5VU43 2346 aa7.13□□□□□ -1.27
VPS11-204ENST00000530809 DDX60Q8IY21 1712 aaKnown RBP7.13□□□□□ -1.27
VPS11-204ENST00000530809 ZBED9Q6R2W3 1325 aa7.12□□□□□ -1.27
VPS11-204ENST00000530809 CDHR2Q9BYE9 1310 aa7.12□□□□□ -1.27
VPS11-204ENST00000530809 BTBD11A6QL63 1104 aa7.12□□□□□ -1.27
VPS11-204ENST00000530809 GTF2E1P29083 439 aaPredicted RBP7.12□□□□□ -1.27
VPS11-204ENST00000530809 SCNN1DP51172 638 aa7.12□□□□□ -1.27
VPS11-204ENST00000530809 DGKZQ13574 1117 aa7.12□□□□□ -1.27
VPS11-204ENST00000530809 CRY2Q49AN0 593 aa7.12□□□□□ -1.27
VPS11-204ENST00000530809 CST9Q5W186 159 aa7.12□□□□□ -1.27
VPS11-204ENST00000530809 SAPCD2Q86UD0 394 aa7.12□□□□□ -1.27
VPS11-204ENST00000530809 IL17REQ8NFR9 667 aa7.12□□□□□ -1.27
VPS11-204ENST00000530809 NYXQ9GZU5 481 aa7.12□□□□□ -1.27
VPS11-204ENST00000530809 VPS33BQ9H267 617 aa7.12□□□□□ -1.27
VPS11-204ENST00000530809 ADARB2Q9NS39 739 aaKnown RBP7.12□□□□□ -1.27
VPS11-204ENST00000530809 LAMB2P55268 1798 aa7.12□□□□□ -1.27
VPS11-204ENST00000530809 POLR2AP24928 1970 aaKnown RBP7.11□□□□□ -1.27
VPS11-204ENST00000530809 COL3A1P02461 1466 aaPredicted RBP7.11□□□□□ -1.27
VPS11-204ENST00000530809 IBTKQ9P2D0 1353 aaPredicted RBP7.11□□□□□ -1.27
VPS11-204ENST00000530809 NPC1L1Q9UHC9 1359 aa7.11□□□□□ -1.27
VPS11-204ENST00000530809 KDM3BQ7LBC6 1761 aa7.11□□□□□ -1.27
VPS11-204ENST00000530809 MYBBP1AQ9BQG0 1328 aaKnown RBP7.11□□□□□ -1.27
VPS11-204ENST00000530809 AOC2O75106 756 aa7.11□□□□□ -1.27
VPS11-204ENST00000530809 NEFLP07196 543 aa7.11□□□□□ -1.27
VPS11-204ENST00000530809 SNRPA1P09661 255 aaKnown RBP7.11□□□□□ -1.27
VPS11-204ENST00000530809 EPS15P42566 896 aa7.11□□□□□ -1.27
VPS11-204ENST00000530809 CACNB1Q02641 598 aaPredicted RBP7.11□□□□□ -1.27
VPS11-204ENST00000530809 NOGQ13253 232 aa7.11□□□□□ -1.27
VPS11-204ENST00000530809 OLFM4Q6UX06 510 aa7.11□□□□□ -1.27
VPS11-204ENST00000530809 NIM1KQ8IY84 436 aa7.11□□□□□ -1.27
VPS11-204ENST00000530809 LARGE2Q8N3Y3 721 aa7.11□□□□□ -1.27
VPS11-204ENST00000530809 RPGRQ92834 1020 aaKnown RBP7.11□□□□□ -1.27
VPS11-204ENST00000530809 GPRC5DQ9NZD1 345 aa7.11□□□□□ -1.27
VPS11-204ENST00000530809 TSKSQ9UJT2 592 aa7.11□□□□□ -1.27
VPS11-204ENST00000530809 DLG5Q8TDM6 1919 aa7.11□□□□□ -1.27
VPS11-204ENST00000530809 TRAF5O00463 557 aa7.1□□□□□ -1.27
VPS11-204ENST00000530809 CELF2O95319 508 aaKnown RBP7.1□□□□□ -1.27
VPS11-204ENST00000530809 HOXA10P31260 410 aaPredicted RBP7.1□□□□□ -1.27
VPS11-204ENST00000530809 ZC3H15Q8WU90 426 aaKnown RBP7.1□□□□□ -1.27
VPS11-204ENST00000530809 TMX4Q9H1E5 349 aaPredicted RBP7.1□□□□□ -1.27
VPS11-204ENST00000530809 MRS2Q9HD23 443 aa7.1□□□□□ -1.27
VPS11-204ENST00000530809 SAGE1Q9NXZ1 904 aa7.1□□□□□ -1.27
VPS11-204ENST00000530809 USP16Q9Y5T5 823 aa7.1□□□□□ -1.27
VPS11-204ENST00000530809 FMR1Q06787 632 aaKnown RBP eCLIP7.09□□□□□ -1.27
VPS11-204ENST00000530809 PRPF38BQ5VTL8 546 aaKnown RBP7.09□□□□□ -1.27
VPS11-204ENST00000530809 ERICH6BQ5W0A0 696 aa7.09□□□□□ -1.27
VPS11-204ENST00000530809 CIAPIN1Q6FI81 312 aa7.09□□□□□ -1.27
VPS11-204ENST00000530809 SUPT20HQ8NEM7 779 aa7.09□□□□□ -1.27
VPS11-204ENST00000530809 RBM17Q96I25 401 aaKnown RBP7.09□□□□□ -1.27
VPS11-204ENST00000530809 CRAMP1Q96RY5 1269 aa7.09□□□□□ -1.27
VPS11-204ENST00000530809 PGAP2Q9UHJ9 254 aa7.09□□□□□ -1.27
VPS11-204ENST00000530809 TNRC18O15417 2968 aaPredicted RBP7.09□□□□□ -1.27
VPS11-204ENST00000530809 LRRC37AA6NMS7 1700 aa7.09□□□□□ -1.27
VPS11-204ENST00000530809 ABCC12Q96J65 1359 aa7.08□□□□□ -1.28
VPS11-204ENST00000530809 FAM177BA6PVY3 158 aa7.08□□□□□ -1.28
VPS11-204ENST00000530809 ERVV-1B6SEH8 477 aa7.08□□□□□ -1.28
VPS11-204ENST00000530809 PPEF1O14829 653 aaPredicted RBP7.08□□□□□ -1.28
VPS11-204ENST00000530809 U2SURPO15042 1029 aaKnown RBP7.08□□□□□ -1.28
VPS11-204ENST00000530809 PPIP5K2O43314 1243 aa7.08□□□□□ -1.28
VPS11-204ENST00000530809 PIP4K2AP48426 406 aaPredicted RBP7.08□□□□□ -1.28
VPS11-204ENST00000530809 HNRNPUQ00839 825 aaKnown RBP eCLIP7.08□□□□□ -1.28
VPS11-204ENST00000530809 CDC37L1Q7L3B6 337 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms