RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 LARP1BQ659C4 914 aaKnown RBP13.83□□□□□ -0.2
TRIM3-210ENST00000530724 SLC4A10Q6U841 1118 aa13.83□□□□□ -0.2
TRIM3-210ENST00000530724 ZNF771Q7L3S4 317 aaPredicted RBP13.83□□□□□ -0.2
TRIM3-210ENST00000530724 LUZP1Q86V48 1076 aa13.83□□□□□ -0.2
TRIM3-210ENST00000530724 CCDC83Q8IWF9 413 aa13.83□□□□□ -0.2
TRIM3-210ENST00000530724 BPIFA3Q9BQP9 254 aa13.83□□□□□ -0.2
TRIM3-210ENST00000530724 DACT1Q9NYF0 836 aa13.83□□□□□ -0.2
TRIM3-210ENST00000530724 PRR36Q9H6K5 1346 aa13.83□□□□□ -0.2
TRIM3-210ENST00000530724 SLU7O95391 586 aaKnown RBP13.82□□□□□ -0.2
TRIM3-210ENST00000530724 GTF2E1P29083 439 aaPredicted RBP13.82□□□□□ -0.2
TRIM3-210ENST00000530724 BMS1Q14692 1282 aaKnown RBP13.82□□□□□ -0.2
TRIM3-210ENST00000530724 KMT5BQ4FZB7 885 aa13.82□□□□□ -0.2
TRIM3-210ENST00000530724 USPL1Q5W0Q7 1092 aa13.82□□□□□ -0.2
TRIM3-210ENST00000530724 PPP1R42Q7Z4L9 355 aa13.82□□□□□ -0.2
TRIM3-210ENST00000530724 SPC24Q8NBT2 197 aa13.82□□□□□ -0.2
TRIM3-210ENST00000530724 GPATCH3Q96I76 525 aa13.82□□□□□ -0.2
TRIM3-210ENST00000530724 TIGD1Q96MW7 591 aa13.82□□□□□ -0.2
TRIM3-210ENST00000530724 JAKMIP1Q96N16 626 aaKnown RBP13.82□□□□□ -0.2
TRIM3-210ENST00000530724 LLPHQ9BRT6 129 aaKnown RBP13.82□□□□□ -0.2
TRIM3-210ENST00000530724 TRIM5Q9C035 493 aa13.82□□□□□ -0.2
TRIM3-210ENST00000530724 ECHDC1Q9NTX5 307 aa13.82□□□□□ -0.2
TRIM3-210ENST00000530724 CLIP2Q9UDT6 1046 aa13.82□□□□□ -0.2
TRIM3-210ENST00000530724 NWD1Q149M9 1564 aa13.82□□□□□ -0.2
TRIM3-210ENST00000530724 ERBB3P21860 1342 aa13.82□□□□□ -0.2
TRIM3-210ENST00000530724 ADCY9O60503 1353 aa13.82□□□□□ -0.2
TRIM3-210ENST00000530724 METP08581 1390 aa13.82□□□□□ -0.2
TRIM3-210ENST00000530724 CEMIPQ8WUJ3 1361 aa13.82□□□□□ -0.2
TRIM3-210ENST00000530724 MED23Q9ULK4 1368 aa13.82□□□□□ -0.2
TRIM3-210ENST00000530724 NPHP4O75161 1426 aaPredicted RBP13.81□□□□□ -0.2
TRIM3-210ENST00000530724 FMN2Q9NZ56 1722 aa13.81□□□□□ -0.2
TRIM3-210ENST00000530724 CCZ1BP86790 482 aa13.81□□□□□ -0.2
TRIM3-210ENST00000530724 CCZ1P86791 482 aaPredicted RBP13.81□□□□□ -0.2
TRIM3-210ENST00000530724 LRMPQ12912 555 aa13.81□□□□□ -0.2
TRIM3-210ENST00000530724 RESTQ13127 1097 aa13.81□□□□□ -0.2
TRIM3-210ENST00000530724 KRT32Q14532 448 aa13.81□□□□□ -0.2
TRIM3-210ENST00000530724 PTPN14Q15678 1187 aa13.81□□□□□ -0.2
TRIM3-210ENST00000530724 STX1AQ16623 288 aa13.81□□□□□ -0.2
TRIM3-210ENST00000530724 TPD52L1Q16890 204 aaPredicted RBP13.81□□□□□ -0.2
TRIM3-210ENST00000530724 CCAR2Q8N163 923 aaKnown RBP13.81□□□□□ -0.2
TRIM3-210ENST00000530724 CHMP4CQ96CF2 233 aa13.81□□□□□ -0.2
TRIM3-210ENST00000530724 UBXN6Q9BZV1 441 aa13.81□□□□□ -0.2
TRIM3-210ENST00000530724 RCOR1Q9UKL0 485 aa13.81□□□□□ -0.2
TRIM3-210ENST00000530724 CFAP45Q9UL16 551 aa13.81□□□□□ -0.2
TRIM3-210ENST00000530724 TPCN1Q9ULQ1 816 aa13.81□□□□□ -0.2
TRIM3-210ENST00000530724 TCHHQ07283 1943 aa13.81□□□□□ -0.2
TRIM3-210ENST00000530724 OVOS2A0A0G2JMS6 1433 aa13.81□□□□□ -0.2
TRIM3-210ENST00000530724 SLIT1O75093 1534 aa13.8□□□□□ -0.2
TRIM3-210ENST00000530724 SURF6O75683 361 aaKnown RBP13.8□□□□□ -0.2
TRIM3-210ENST00000530724 ALDH1L1O75891 902 aa13.8□□□□□ -0.2
TRIM3-210ENST00000530724 CYP2C19P33261 490 aa13.8□□□□□ -0.2
TRIM3-210ENST00000530724 HDGFP51858 240 aaKnown RBP13.8□□□□□ -0.2
TRIM3-210ENST00000530724 MUM1L1Q5H9M0 696 aa13.8□□□□□ -0.2
TRIM3-210ENST00000530724 CREB3L3Q68CJ9 461 aa13.8□□□□□ -0.2
TRIM3-210ENST00000530724 NAA16Q6N069 864 aaPredicted RBP13.8□□□□□ -0.2
TRIM3-210ENST00000530724 NOL8Q76FK4 1167 aaKnown RBP13.8□□□□□ -0.2
TRIM3-210ENST00000530724 SPATA32Q96LK8 384 aa13.8□□□□□ -0.2
TRIM3-210ENST00000530724 C16orf45Q96MC5 204 aaPredicted RBP13.8□□□□□ -0.2
TRIM3-210ENST00000530724 SRRTQ9BXP5 876 aaKnown RBP13.8□□□□□ -0.2
TRIM3-210ENST00000530724 NCAPD2Q15021 1401 aa13.8□□□□□ -0.2
TRIM3-210ENST00000530724 FAM177BA6PVY3 158 aa13.79□□□□□ -0.2
TRIM3-210ENST00000530724 CCP110O43303 1012 aa13.79□□□□□ -0.2
TRIM3-210ENST00000530724 TPM1P09493 284 aa13.79□□□□□ -0.2
TRIM3-210ENST00000530724 RPS6KB1P23443 525 aa13.79□□□□□ -0.2
TRIM3-210ENST00000530724 TAF7Q15545 349 aaPredicted RBP13.79□□□□□ -0.2
TRIM3-210ENST00000530724 CCDC144BQ3MJ40 725 aa13.79□□□□□ -0.2
TRIM3-210ENST00000530724 BEND3Q5T5X7 828 aa13.79□□□□□ -0.2
TRIM3-210ENST00000530724 CCDC144CPQ8IYA2 1237 aa13.79□□□□□ -0.2
TRIM3-210ENST00000530724 MSL3Q8N5Y2 521 aaKnown RBP13.79□□□□□ -0.2
TRIM3-210ENST00000530724 CCDC150Q8NCX0 1101 aa13.79□□□□□ -0.2
TRIM3-210ENST00000530724 PGBD1Q96JS3 809 aa13.79□□□□□ -0.2
TRIM3-210ENST00000530724 ZNF215Q9UL58 517 aaPredicted RBP13.79□□□□□ -0.2
TRIM3-210ENST00000530724 UTYO14607 1347 aa13.79□□□□□ -0.2
TRIM3-210ENST00000530724 TSPOAP1O95153 1857 aa13.78□□□□□ -0.2
TRIM3-210ENST00000530724 GNAT3A8MTJ3 354 aa13.78□□□□□ -0.2
TRIM3-210ENST00000530724 SLC27A2O14975 620 aa13.78□□□□□ -0.2
TRIM3-210ENST00000530724 MYO1BO43795 1136 aa13.78□□□□□ -0.2
TRIM3-210ENST00000530724 PTH1RQ03431 593 aa13.78□□□□□ -0.2
TRIM3-210ENST00000530724 ADCK5Q3MIX3 580 aa13.78□□□□□ -0.2
TRIM3-210ENST00000530724 CDC37L1Q7L3B6 337 aa13.78□□□□□ -0.2
TRIM3-210ENST00000530724 MPNDQ8N594 471 aa13.78□□□□□ -0.2
TRIM3-210ENST00000530724 SMARCC2Q8TAQ2 1214 aa13.78□□□□□ -0.2
TRIM3-210ENST00000530724 DNAJC2Q99543 621 aaKnown RBP13.78□□□□□ -0.2
TRIM3-210ENST00000530724 ARID3AQ99856 593 aa13.78□□□□□ -0.2
TRIM3-210ENST00000530724 ANO10Q9NW15 660 aa13.78□□□□□ -0.2
TRIM3-210ENST00000530724 NRBP1Q9UHY1 535 aa13.78□□□□□ -0.2
TRIM3-210ENST00000530724 RBM8AQ9Y5S9 174 aaKnown RBP13.78□□□□□ -0.2
TRIM3-210ENST00000530724 VPS37CA5D8V6 355 aaPredicted RBP13.77□□□□□ -0.21
TRIM3-210ENST00000530724 GOLGA6L4A6NEF3 574 aa13.77□□□□□ -0.21
TRIM3-210ENST00000530724 ZRANB2O95218 330 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRIM3-210ENST00000530724 FOXD4L6Q3SYB3 417 aaPredicted RBP13.77□□□□□ -0.21
TRIM3-210ENST00000530724 HSP90AB2PQ58FF8 381 aa13.77□□□□□ -0.21
TRIM3-210ENST00000530724 FBXO38Q6PIJ6 1188 aa13.77□□□□□ -0.21
TRIM3-210ENST00000530724 FOXD4L3Q6VB84 417 aaPredicted RBP13.77□□□□□ -0.21
TRIM3-210ENST00000530724 PHLPP2Q6ZVD8 1323 aa13.77□□□□□ -0.21
TRIM3-210ENST00000530724 FCHSD1Q86WN1 690 aa13.77□□□□□ -0.21
TRIM3-210ENST00000530724 NUTM1Q86Y26 1132 aa13.77□□□□□ -0.21
TRIM3-210ENST00000530724 CLASRPQ8N2M8 674 aaKnown RBP13.77□□□□□ -0.21
TRIM3-210ENST00000530724 ENGASEQ8NFI3 743 aa13.77□□□□□ -0.21
TRIM3-210ENST00000530724 RIMS1Q86UR5 1692 aaKnown RBP13.76□□□□□ -0.21
TRIM3-210ENST00000530724 GOLGA6L19H0YKK7 550 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms