RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 NISCHQ9Y2I1 1504 aa10.28□□□□□ -0.76
VPS26B-205ENST00000530402 DCDC2BA2VCK2 349 aa10.28□□□□□ -0.76
VPS26B-205ENST00000530402 PDGFAP04085 211 aa10.28□□□□□ -0.76
VPS26B-205ENST00000530402 INPP5BP32019 993 aa10.28□□□□□ -0.76
VPS26B-205ENST00000530402 FOXR1Q6PIV2 292 aa10.28□□□□□ -0.76
VPS26B-205ENST00000530402 RPLP1P05386 114 aaKnown RBP10.27□□□□□ -0.77
VPS26B-205ENST00000530402 PDE3BQ13370 1112 aa10.27□□□□□ -0.77
VPS26B-205ENST00000530402 GTPBP3Q969Y2 492 aaKnown RBP10.27□□□□□ -0.77
VPS26B-205ENST00000530402 ZNF837Q96EG3 531 aaPredicted RBP10.27□□□□□ -0.77
VPS26B-205ENST00000530402 CITED4Q96RK1 184 aa10.27□□□□□ -0.77
VPS26B-205ENST00000530402 ANKRD33BA6NCL7 494 aa10.26□□□□□ -0.77
VPS26B-205ENST00000530402 THBS1P07996 1170 aa10.26□□□□□ -0.77
VPS26B-205ENST00000530402 VWA5B2Q8N398 1253 aa10.26□□□□□ -0.77
VPS26B-205ENST00000530402 TRERF1Q96PN7 1200 aa10.26□□□□□ -0.77
VPS26B-205ENST00000530402 RBCK1Q9BYM8 510 aa10.26□□□□□ -0.77
VPS26B-205ENST00000530402 FNDC3AQ9Y2H6 1198 aaKnown RBP10.26□□□□□ -0.77
VPS26B-205ENST00000530402 FAM157BP0CG42 384 aa10.25□□□□□ -0.77
VPS26B-205ENST00000530402 ERCC3P19447 782 aa10.25□□□□□ -0.77
VPS26B-205ENST00000530402 ZNF787Q6DD87 383 aa10.25□□□□□ -0.77
VPS26B-205ENST00000530402 SV2AQ7L0J3 742 aa10.25□□□□□ -0.77
VPS26B-205ENST00000530402 ASB16Q96NS5 453 aa10.25□□□□□ -0.77
VPS26B-205ENST00000530402 PHF24Q9UPV7 400 aa10.25□□□□□ -0.77
VPS26B-205ENST00000530402 KCNH4Q9UQ05 1017 aa10.25□□□□□ -0.77
VPS26B-205ENST00000530402 UBAP1LF5GYI3 381 aa10.24□□□□□ -0.77
VPS26B-205ENST00000530402 BNIP3LO60238 219 aa10.24□□□□□ -0.77
VPS26B-205ENST00000530402 MAPTP10636 758 aaKnown RBP10.24□□□□□ -0.77
VPS26B-205ENST00000530402 DNAJC14Q6Y2X3 702 aaPredicted RBP10.24□□□□□ -0.77
VPS26B-205ENST00000530402 TMC7Q7Z402 723 aa10.24□□□□□ -0.77
VPS26B-205ENST00000530402 RGS22Q8NE09 1264 aa10.24□□□□□ -0.77
VPS26B-205ENST00000530402 ABHD17AQ96GS6 310 aa10.24□□□□□ -0.77
VPS26B-205ENST00000530402 VEGFBP49765 207 aa10.23□□□□□ -0.77
VPS26B-205ENST00000530402 TNP2Q05952 138 aa10.23□□□□□ -0.77
VPS26B-205ENST00000530402 EHHADHQ08426 723 aa10.23□□□□□ -0.77
VPS26B-205ENST00000530402 SFSWAPQ12872 951 aaKnown RBP10.23□□□□□ -0.77
VPS26B-205ENST00000530402 DMRTB1Q96MA1 342 aa10.23□□□□□ -0.77
VPS26B-205ENST00000530402 NXF1Q9UBU9 619 aaKnown RBP10.23□□□□□ -0.77
VPS26B-205ENST00000530402 GPR25O00155 361 aa10.22□□□□□ -0.77
VPS26B-205ENST00000530402 XYLBO75191 536 aa10.22□□□□□ -0.77
VPS26B-205ENST00000530402 UBAP2LQ14157 1087 aaKnown RBP10.22□□□□□ -0.77
VPS26B-205ENST00000530402 GJD3Q8N144 294 aa10.22□□□□□ -0.77
VPS26B-205ENST00000530402 FOXD4L4Q8WXT5 416 aaPredicted RBP10.22□□□□□ -0.77
VPS26B-205ENST00000530402 GGNBP2Q9H3C7 697 aa10.22□□□□□ -0.77
VPS26B-205ENST00000530402 MARK1Q9P0L2 795 aa10.22□□□□□ -0.77
VPS26B-205ENST00000530402 ATXN7L1Q9ULK2 861 aaPredicted RBP10.22□□□□□ -0.77
VPS26B-205ENST00000530402 A6NHS1 94 aa10.21□□□□□ -0.77
VPS26B-205ENST00000530402 LAMC2Q13753 1193 aa10.21□□□□□ -0.77
VPS26B-205ENST00000530402 EFSO43281 561 aa10.2□□□□□ -0.78
VPS26B-205ENST00000530402 CD33P20138 364 aa10.2□□□□□ -0.78
VPS26B-205ENST00000530402 PLCB3Q01970 1234 aa10.2□□□□□ -0.78
VPS26B-205ENST00000530402 ZNF438Q7Z4V0 828 aa10.2□□□□□ -0.78
VPS26B-205ENST00000530402 PNMA5Q96PV4 448 aa10.2□□□□□ -0.78
VPS26B-205ENST00000530402 FAM129BQ96TA1 746 aa10.2□□□□□ -0.78
VPS26B-205ENST00000530402 KCNMB2Q9Y691 235 aa10.2□□□□□ -0.78
VPS26B-205ENST00000530402 FGFR3P22607 806 aa10.19□□□□□ -0.78
VPS26B-205ENST00000530402 KCNQ4P56696 695 aa10.19□□□□□ -0.78
VPS26B-205ENST00000530402 TRIP4Q15650 581 aaPredicted RBP10.19□□□□□ -0.78
VPS26B-205ENST00000530402 KRT25Q7Z3Z0 450 aa10.19□□□□□ -0.78
VPS26B-205ENST00000530402 CFHR5Q9BXR6 569 aa10.19□□□□□ -0.78
VPS26B-205ENST00000530402 NIF3L1Q9GZT8 377 aa10.19□□□□□ -0.78
VPS26B-205ENST00000530402 STRN4Q9NRL3 753 aa10.19□□□□□ -0.78
VPS26B-205ENST00000530402 NDFIP2Q9NV92 336 aa10.19□□□□□ -0.78
VPS26B-205ENST00000530402 GRNP28799 593 aaKnown RBP10.18□□□□□ -0.78
VPS26B-205ENST00000530402 CCINQ13939 588 aa10.18□□□□□ -0.78
VPS26B-205ENST00000530402 NANOS1Q8WY41 292 aaKnown RBP10.18□□□□□ -0.78
VPS26B-205ENST00000530402 GPR182O15218 404 aa10.17□□□□□ -0.78
VPS26B-205ENST00000530402 NEFLP07196 543 aa10.17□□□□□ -0.78
VPS26B-205ENST00000530402 MAPK8P45983 427 aa10.17□□□□□ -0.78
VPS26B-205ENST00000530402 PDE12Q6L8Q7 609 aaKnown RBP10.17□□□□□ -0.78
VPS26B-205ENST00000530402 C11orf16Q9NQ32 467 aa10.17□□□□□ -0.78
VPS26B-205ENST00000530402 TREHO43280 583 aa10.16□□□□□ -0.78
VPS26B-205ENST00000530402 SASH3O75995 380 aa10.16□□□□□ -0.78
VPS26B-205ENST00000530402 SPEM2Q0P670 501 aa10.16□□□□□ -0.78
VPS26B-205ENST00000530402 NPAS4Q8IUM7 802 aa10.16□□□□□ -0.78
VPS26B-205ENST00000530402 NPAS3Q8IXF0 933 aa10.16□□□□□ -0.78
VPS26B-205ENST00000530402 BCL2L13Q9BXK5 485 aa10.16□□□□□ -0.78
VPS26B-205ENST00000530402 ELP3Q9H9T3 547 aa10.16□□□□□ -0.78
VPS26B-205ENST00000530402 PRR12Q9ULL5 1215 aa10.16□□□□□ -0.78
VPS26B-205ENST00000530402 EGFRP00533 1210 aa10.15□□□□□ -0.78
VPS26B-205ENST00000530402 NEUROD1Q13562 356 aa10.15□□□□□ -0.78
VPS26B-205ENST00000530402 GRIN2CQ14957 1233 aa10.15□□□□□ -0.78
VPS26B-205ENST00000530402 EAPPQ56P03 285 aaPredicted RBP10.15□□□□□ -0.78
VPS26B-205ENST00000530402 TTC39BQ5VTQ0 682 aaPredicted RBP10.15□□□□□ -0.78
VPS26B-205ENST00000530402 NLRP13Q86W25 1043 aa10.15□□□□□ -0.78
VPS26B-205ENST00000530402 SLC16A10Q8TF71 515 aa10.15□□□□□ -0.78
VPS26B-205ENST00000530402 BHMTQ93088 406 aa10.15□□□□□ -0.78
VPS26B-205ENST00000530402 GSX2Q9BZM3 304 aa10.15□□□□□ -0.78
VPS26B-205ENST00000530402 H3BM21 787 aa10.14□□□□□ -0.79
VPS26B-205ENST00000530402 RARAP10276 462 aa10.14□□□□□ -0.79
VPS26B-205ENST00000530402 TARSP26639 723 aaKnown RBP10.14□□□□□ -0.79
VPS26B-205ENST00000530402 CTBSQ01459 385 aa10.14□□□□□ -0.79
VPS26B-205ENST00000530402 RAB44Q7Z6P3 723 aaPredicted RBP10.14□□□□□ -0.79
VPS26B-205ENST00000530402 ALKBH8Q96BT7 664 aaKnown RBP10.14□□□□□ -0.79
VPS26B-205ENST00000530402 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.14□□□□□ -0.79
VPS26B-205ENST00000530402 P4HBP07237 508 aaKnown RBP10.13□□□□□ -0.79
VPS26B-205ENST00000530402 BMP4P12644 408 aa10.13□□□□□ -0.79
VPS26B-205ENST00000530402 MX2P20592 715 aa10.13□□□□□ -0.79
VPS26B-205ENST00000530402 XKR5Q6UX68 686 aa10.13□□□□□ -0.79
VPS26B-205ENST00000530402 SLC30A3Q99726 388 aa10.13□□□□□ -0.79
VPS26B-205ENST00000530402 ABI2Q9NYB9 513 aaPredicted RBP10.13□□□□□ -0.79
VPS26B-205ENST00000530402 TMEM63CQ9P1W3 806 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms