RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 LRRC37AA6NMS7 1700 aa9.92□□□□□ -0.82
NUP98-217ENST00000530345 RNF123Q5XPI4 1314 aa9.91□□□□□ -0.82
NUP98-217ENST00000530345 CDHR2Q9BYE9 1310 aa9.91□□□□□ -0.82
NUP98-217ENST00000530345 CA12O43570 354 aa9.91□□□□□ -0.82
NUP98-217ENST00000530345 HOXA10P31260 410 aaPredicted RBP9.91□□□□□ -0.82
NUP98-217ENST00000530345 TAF7Q15545 349 aaPredicted RBP9.91□□□□□ -0.82
NUP98-217ENST00000530345 USP50Q70EL3 339 aaPredicted RBP9.91□□□□□ -0.82
NUP98-217ENST00000530345 SYNE4Q8N205 404 aa9.91□□□□□ -0.82
NUP98-217ENST00000530345 RPGRQ92834 1020 aaKnown RBP9.91□□□□□ -0.82
NUP98-217ENST00000530345 TMX4Q9H1E5 349 aaPredicted RBP9.91□□□□□ -0.82
NUP98-217ENST00000530345 MAP3K15Q6ZN16 1313 aa9.9□□□□□ -0.82
NUP98-217ENST00000530345 WDR33Q9C0J8 1336 aaKnown RBP9.9□□□□□ -0.82
NUP98-217ENST00000530345 NBPF26B4DH59 902 aa9.9□□□□□ -0.82
NUP98-217ENST00000530345 KCNQ3O43525 872 aa9.9□□□□□ -0.82
NUP98-217ENST00000530345 NBPF10Q6P3W6 841 aaKnown RBP9.9□□□□□ -0.82
NUP98-217ENST00000530345 KIF6Q6ZMV9 814 aa9.9□□□□□ -0.82
NUP98-217ENST00000530345 NBPF15Q8N660 670 aa9.9□□□□□ -0.82
NUP98-217ENST00000530345 PHACTR3Q96KR7 559 aa9.9□□□□□ -0.82
NUP98-217ENST00000530345 CRAMP1Q96RY5 1269 aa9.9□□□□□ -0.82
NUP98-217ENST00000530345 DDX21Q9NR30 783 aaKnown RBP eCLIP9.9□□□□□ -0.82
NUP98-217ENST00000530345 ABT1Q9ULW3 272 aaKnown RBP9.9□□□□□ -0.82
NUP98-217ENST00000530345 PSME4Q14997 1843 aa9.9□□□□□ -0.82
NUP98-217ENST00000530345 ABCC12Q96J65 1359 aa9.89□□□□□ -0.83
NUP98-217ENST00000530345 U2AF1L5P0DN76 240 aaPredicted RBP9.89□□□□□ -0.83
NUP98-217ENST00000530345 HSPA8P11142 646 aaKnown RBP9.89□□□□□ -0.83
NUP98-217ENST00000530345 LBX1P52954 281 aa9.89□□□□□ -0.83
NUP98-217ENST00000530345 U2AF1Q01081 240 aaKnown RBP eCLIP9.89□□□□□ -0.83
NUP98-217ENST00000530345 PARP10Q53GL7 1025 aa9.89□□□□□ -0.83
NUP98-217ENST00000530345 SUPT20HQ8NEM7 779 aa9.89□□□□□ -0.83
NUP98-217ENST00000530345 RBM17Q96I25 401 aaKnown RBP9.89□□□□□ -0.83
NUP98-217ENST00000530345 HHIPL1Q96JK4 782 aa9.89□□□□□ -0.83
NUP98-217ENST00000530345 COL4A5P29400 1685 aa9.89□□□□□ -0.83
NUP98-217ENST00000530345 TAF1P21675 1872 aa9.89□□□□□ -0.83
NUP98-217ENST00000530345 TNRC18O15417 2968 aaPredicted RBP9.89□□□□□ -0.83
NUP98-217ENST00000530345 MAP2K2P36507 400 aa9.88□□□□□ -0.83
NUP98-217ENST00000530345 MAP1SQ66K74 1059 aaPredicted RBP9.88□□□□□ -0.83
NUP98-217ENST00000530345 MCM10Q7L590 875 aa9.88□□□□□ -0.83
NUP98-217ENST00000530345 PPP1R42Q7Z4L9 355 aa9.88□□□□□ -0.83
NUP98-217ENST00000530345 NIM1KQ8IY84 436 aa9.88□□□□□ -0.83
NUP98-217ENST00000530345 LARGE2Q8N3Y3 721 aa9.88□□□□□ -0.83
NUP98-217ENST00000530345 PNNQ9H307 717 aaKnown RBP9.88□□□□□ -0.83
NUP98-217ENST00000530345 PPEF1O14829 653 aaPredicted RBP9.87□□□□□ -0.83
NUP98-217ENST00000530345 SLC34A2O95436 690 aa9.87□□□□□ -0.83
NUP98-217ENST00000530345 PIP4K2AP48426 406 aaPredicted RBP9.87□□□□□ -0.83
NUP98-217ENST00000530345 SCNN1DP51172 638 aa9.87□□□□□ -0.83
NUP98-217ENST00000530345 HLFQ16534 295 aa9.87□□□□□ -0.83
NUP98-217ENST00000530345 ABHD8Q96I13 439 aa9.87□□□□□ -0.83
NUP98-217ENST00000530345 CAPNS2Q96L46 248 aa9.87□□□□□ -0.83
NUP98-217ENST00000530345 ADARB2Q9NS39 739 aaKnown RBP9.87□□□□□ -0.83
NUP98-217ENST00000530345 PRAMEF22A3QJZ6 481 aa9.86□□□□□ -0.83
NUP98-217ENST00000530345 GIGYF2Q6Y7W6 1299 aaKnown RBP9.86□□□□□ -0.83
NUP98-217ENST00000530345 TMC4Q7Z404 712 aa9.86□□□□□ -0.83
NUP98-217ENST00000530345 ZC3H15Q8WU90 426 aaKnown RBP9.86□□□□□ -0.83
NUP98-217ENST00000530345 GJA3Q9Y6H8 435 aa9.86□□□□□ -0.83
NUP98-217ENST00000530345 TLL2Q9Y6L7 1015 aa9.86□□□□□ -0.83
NUP98-217ENST00000530345 MYH3P11055 1940 aa9.86□□□□□ -0.83
NUP98-217ENST00000530345 FAM177BA6PVY3 158 aa9.85□□□□□ -0.83
NUP98-217ENST00000530345 PPIP5K2O43314 1243 aa9.85□□□□□ -0.83
NUP98-217ENST00000530345 PPP2R1AP30153 589 aa9.85□□□□□ -0.83
NUP98-217ENST00000530345 RGS19P49795 217 aa9.85□□□□□ -0.83
NUP98-217ENST00000530345 BRPF1P55201 1214 aaPredicted RBP9.85□□□□□ -0.83
NUP98-217ENST00000530345 HSP90AB3PQ58FF7 597 aa9.85□□□□□ -0.83
NUP98-217ENST00000530345 NLRP3Q96P20 1036 aa9.85□□□□□ -0.83
NUP98-217ENST00000530345 GPR101Q96P66 508 aaPredicted RBP9.85□□□□□ -0.83
NUP98-217ENST00000530345 RTFDC1Q9BY42 306 aaPredicted RBP9.85□□□□□ -0.83
NUP98-217ENST00000530345 BABAM1Q9NWV8 329 aa9.85□□□□□ -0.83
NUP98-217ENST00000530345 GPRC5DQ9NZD1 345 aa9.85□□□□□ -0.83
NUP98-217ENST00000530345 ATP6V0A2Q9Y487 856 aa9.85□□□□□ -0.83
NUP98-217ENST00000530345 UBN2Q6ZU65 1347 aa9.84□□□□□ -0.83
NUP98-217ENST00000530345 BBOX1O75936 387 aa9.84□□□□□ -0.83
NUP98-217ENST00000530345 NTSR2O95665 410 aa9.84□□□□□ -0.83
NUP98-217ENST00000530345 EIF4A1P60842 406 aaKnown RBP9.84□□□□□ -0.83
NUP98-217ENST00000530345 TNIP1Q15025 636 aa9.84□□□□□ -0.83
NUP98-217ENST00000530345 OLFM4Q6UX06 510 aa9.84□□□□□ -0.83
NUP98-217ENST00000530345 PAXIP1Q6ZW49 1069 aaPredicted RBP9.84□□□□□ -0.83
NUP98-217ENST00000530345 NUTM1Q86Y26 1132 aa9.84□□□□□ -0.83
NUP98-217ENST00000530345 ZNF34Q8IZ26 560 aa9.84□□□□□ -0.83
NUP98-217ENST00000530345 ZNRF3Q9ULT6 936 aa9.84□□□□□ -0.83
NUP98-217ENST00000530345 EPS15P42566 896 aa9.83□□□□□ -0.84
NUP98-217ENST00000530345 MLLT1Q03111 559 aaPredicted RBP9.83□□□□□ -0.84
NUP98-217ENST00000530345 SLC10A5Q5PT55 438 aa9.83□□□□□ -0.84
NUP98-217ENST00000530345 SAPCD2Q86UD0 394 aa9.83□□□□□ -0.84
NUP98-217ENST00000530345 PGAP2Q9UHJ9 254 aa9.83□□□□□ -0.84
NUP98-217ENST00000530345 CACNA1FO60840 1977 aa9.83□□□□□ -0.84
NUP98-217ENST00000530345 MAPK8IP3Q9UPT6 1336 aa9.82□□□□□ -0.84
NUP98-217ENST00000530345 KIAA2012Q0VF49 1180 aa9.82□□□□□ -0.84
NUP98-217ENST00000530345 NOGQ13253 232 aa9.82□□□□□ -0.84
NUP98-217ENST00000530345 DCTN1Q14203 1278 aa9.82□□□□□ -0.84
NUP98-217ENST00000530345 NFE2L2Q16236 605 aa9.82□□□□□ -0.84
NUP98-217ENST00000530345 FAM161AQ3B820 660 aa9.82□□□□□ -0.84
NUP98-217ENST00000530345 SUSD4Q5VX71 490 aa9.82□□□□□ -0.84
NUP98-217ENST00000530345 UTP14AQ9BVJ6 771 aaKnown RBP9.82□□□□□ -0.84
NUP98-217ENST00000530345 PCDH10Q9P2E7 1040 aa9.82□□□□□ -0.84
NUP98-217ENST00000530345 DUOX1Q9NRD9 1551 aa9.82□□□□□ -0.84
NUP98-217ENST00000530345 SCN9AQ15858 1988 aa9.81□□□□□ -0.84
NUP98-217ENST00000530345 CELF2O95319 508 aaKnown RBP9.81□□□□□ -0.84
NUP98-217ENST00000530345 GPTP24298 496 aa9.81□□□□□ -0.84
NUP98-217ENST00000530345 LMOD3Q0VAK6 560 aa9.81□□□□□ -0.84
NUP98-217ENST00000530345 AOC3Q16853 763 aa9.81□□□□□ -0.84
NUP98-217ENST00000530345 CST9Q5W186 159 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms