RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 NUDT16Q96DE0 195 aaKnown RBP10.32□□□□□ -0.76
CASP4-208ENST00000530309 RTCBQ9Y3I0 505 aaKnown RBP10.32□□□□□ -0.76
CASP4-208ENST00000530309 PCDHGC4Q9Y5F7 938 aa10.32□□□□□ -0.76
CASP4-208ENST00000530309 POTECB2RU33 542 aa10.31□□□□□ -0.76
CASP4-208ENST00000530309 ATXN7O15265 892 aaPredicted RBP10.31□□□□□ -0.76
CASP4-208ENST00000530309 FAM157BP0CG42 384 aa10.31□□□□□ -0.76
CASP4-208ENST00000530309 EPB42P16452 691 aa10.31□□□□□ -0.76
CASP4-208ENST00000530309 UBAP2LQ14157 1087 aaKnown RBP10.31□□□□□ -0.76
CASP4-208ENST00000530309 FOXD4L4Q8WXT5 416 aaPredicted RBP10.31□□□□□ -0.76
CASP4-208ENST00000530309 FAM129BQ96TA1 746 aa10.31□□□□□ -0.76
CASP4-208ENST00000530309 BRD7Q9NPI1 651 aa10.31□□□□□ -0.76
CASP4-208ENST00000530309 NPAS4Q8IUM7 802 aa10.3□□□□□ -0.76
CASP4-208ENST00000530309 TTC16Q8NEE8 873 aa10.3□□□□□ -0.76
CASP4-208ENST00000530309 DMRTB1Q96MA1 342 aa10.3□□□□□ -0.76
CASP4-208ENST00000530309 USP20Q9Y2K6 914 aa10.3□□□□□ -0.76
CASP4-208ENST00000530309 PPFIA3O75145 1194 aa10.29□□□□□ -0.76
CASP4-208ENST00000530309 IGHA2P01877 340 aa10.29□□□□□ -0.76
CASP4-208ENST00000530309 EHHADHQ08426 723 aa10.29□□□□□ -0.76
CASP4-208ENST00000530309 CMTR1Q8N1G2 835 aaKnown RBP10.29□□□□□ -0.76
CASP4-208ENST00000530309 ZNF837Q96EG3 531 aaPredicted RBP10.29□□□□□ -0.76
CASP4-208ENST00000530309 AMOTL2Q9Y2J4 779 aa10.29□□□□□ -0.76
CASP4-208ENST00000530309 EFSO43281 561 aa10.28□□□□□ -0.76
CASP4-208ENST00000530309 GRNP28799 593 aaKnown RBP10.28□□□□□ -0.76
CASP4-208ENST00000530309 KCNQ4P56696 695 aa10.28□□□□□ -0.76
CASP4-208ENST00000530309 GGNBP2Q9H3C7 697 aa10.28□□□□□ -0.76
CASP4-208ENST00000530309 C11orf16Q9NQ32 467 aa10.28□□□□□ -0.76
CASP4-208ENST00000530309 FNDC3AQ9Y2H6 1198 aaKnown RBP10.28□□□□□ -0.76
CASP4-208ENST00000530309 KCNMB2Q9Y691 235 aa10.28□□□□□ -0.76
CASP4-208ENST00000530309 KHNYNO15037 678 aaKnown RBP10.27□□□□□ -0.77
CASP4-208ENST00000530309 TREHO43280 583 aa10.27□□□□□ -0.77
CASP4-208ENST00000530309 TNP2Q05952 138 aa10.27□□□□□ -0.77
CASP4-208ENST00000530309 C8orf34Q49A92 452 aa10.27□□□□□ -0.77
CASP4-208ENST00000530309 NDFIP2Q9NV92 336 aa10.27□□□□□ -0.77
CASP4-208ENST00000530309 DCDC2BA2VCK2 349 aa10.26□□□□□ -0.77
CASP4-208ENST00000530309 BNIP3LO60238 219 aa10.26□□□□□ -0.77
CASP4-208ENST00000530309 MAPTP10636 758 aaKnown RBP10.26□□□□□ -0.77
CASP4-208ENST00000530309 PLCB3Q01970 1234 aa10.26□□□□□ -0.77
CASP4-208ENST00000530309 LAMC2Q13753 1193 aa10.26□□□□□ -0.77
CASP4-208ENST00000530309 COL19A1Q14993 1142 aa10.26□□□□□ -0.77
CASP4-208ENST00000530309 GTPBP3Q969Y2 492 aaKnown RBP10.26□□□□□ -0.77
CASP4-208ENST00000530309 ALKBH8Q96BT7 664 aaKnown RBP10.26□□□□□ -0.77
CASP4-208ENST00000530309 KCNH4Q9UQ05 1017 aa10.26□□□□□ -0.77
CASP4-208ENST00000530309 UBAP1LF5GYI3 381 aa10.25□□□□□ -0.77
CASP4-208ENST00000530309 GPR182O15218 404 aa10.25□□□□□ -0.77
CASP4-208ENST00000530309 SFSWAPQ12872 951 aaKnown RBP10.25□□□□□ -0.77
CASP4-208ENST00000530309 DSC3Q14574 896 aa10.25□□□□□ -0.77
CASP4-208ENST00000530309 TRIP4Q15650 581 aaPredicted RBP10.25□□□□□ -0.77
CASP4-208ENST00000530309 XYLBO75191 536 aa10.24□□□□□ -0.77
CASP4-208ENST00000530309 EGFRP00533 1210 aa10.24□□□□□ -0.77
CASP4-208ENST00000530309 PDE12Q6L8Q7 609 aaKnown RBP10.24□□□□□ -0.77
CASP4-208ENST00000530309 FOXR1Q6PIV2 292 aa10.24□□□□□ -0.77
CASP4-208ENST00000530309 ABHD17AQ96GS6 310 aa10.24□□□□□ -0.77
CASP4-208ENST00000530309 CDC14CA4D256 554 aa10.23□□□□□ -0.77
CASP4-208ENST00000530309 A6NHS1 94 aa10.23□□□□□ -0.77
CASP4-208ENST00000530309 XKR5Q6UX68 686 aa10.23□□□□□ -0.77
CASP4-208ENST00000530309 VWA5B2Q8N398 1253 aa10.23□□□□□ -0.77
CASP4-208ENST00000530309 NANOS1Q8WY41 292 aaKnown RBP10.23□□□□□ -0.77
CASP4-208ENST00000530309 BCL2L13Q9BXK5 485 aa10.23□□□□□ -0.77
CASP4-208ENST00000530309 CFHR5Q9BXR6 569 aa10.23□□□□□ -0.77
CASP4-208ENST00000530309 NIF3L1Q9GZT8 377 aa10.23□□□□□ -0.77
CASP4-208ENST00000530309 HCN2Q9UL51 889 aa10.23□□□□□ -0.77
CASP4-208ENST00000530309 ATXN7L1Q9ULK2 861 aaPredicted RBP10.23□□□□□ -0.77
CASP4-208ENST00000530309 PHF24Q9UPV7 400 aa10.23□□□□□ -0.77
CASP4-208ENST00000530309 RBM47A0AV96 593 aaKnown RBP10.22□□□□□ -0.77
CASP4-208ENST00000530309 FMR1Q06787 632 aaKnown RBP eCLIP10.22□□□□□ -0.77
CASP4-208ENST00000530309 SV2AQ7L0J3 742 aa10.22□□□□□ -0.77
CASP4-208ENST00000530309 ZNF438Q7Z4V0 828 aa10.22□□□□□ -0.77
CASP4-208ENST00000530309 TRERF1Q96PN7 1200 aa10.22□□□□□ -0.77
CASP4-208ENST00000530309 STRN4Q9NRL3 753 aa10.22□□□□□ -0.77
CASP4-208ENST00000530309 MARK1Q9P0L2 795 aa10.22□□□□□ -0.77
CASP4-208ENST00000530309 NEFLP07196 543 aa10.21□□□□□ -0.77
CASP4-208ENST00000530309 P4HBP07237 508 aaKnown RBP10.21□□□□□ -0.77
CASP4-208ENST00000530309 EAPPQ56P03 285 aaPredicted RBP10.21□□□□□ -0.77
CASP4-208ENST00000530309 FBXO33Q7Z6M2 555 aa10.21□□□□□ -0.77
CASP4-208ENST00000530309 ELP3Q9H9T3 547 aa10.21□□□□□ -0.77
CASP4-208ENST00000530309 NXF1Q9UBU9 619 aaKnown RBP10.21□□□□□ -0.77
CASP4-208ENST00000530309 CCINQ13939 588 aa10.2□□□□□ -0.78
CASP4-208ENST00000530309 NLRP13Q86W25 1043 aa10.2□□□□□ -0.78
CASP4-208ENST00000530309 GSX2Q9BZM3 304 aa10.2□□□□□ -0.78
CASP4-208ENST00000530309 TNFRSF21O75509 655 aa10.19□□□□□ -0.78
CASP4-208ENST00000530309 CD33P20138 364 aa10.19□□□□□ -0.78
CASP4-208ENST00000530309 NPAS3Q8IXF0 933 aa10.19□□□□□ -0.78
CASP4-208ENST00000530309 GPR25O00155 361 aa10.18□□□□□ -0.78
CASP4-208ENST00000530309 FGFR3P22607 806 aa10.18□□□□□ -0.78
CASP4-208ENST00000530309 MAPK8P45983 427 aa10.18□□□□□ -0.78
CASP4-208ENST00000530309 SPEM2Q0P670 501 aa10.18□□□□□ -0.78
CASP4-208ENST00000530309 GRIN2CQ14957 1233 aa10.18□□□□□ -0.78
CASP4-208ENST00000530309 FAM182BQ5T319 152 aa10.18□□□□□ -0.78
CASP4-208ENST00000530309 GIPC2Q8TF65 315 aa10.18□□□□□ -0.78
CASP4-208ENST00000530309 EFCC1Q9HA90 598 aa10.18□□□□□ -0.78
CASP4-208ENST00000530309 TMEM63CQ9P1W3 806 aa10.18□□□□□ -0.78
CASP4-208ENST00000530309 SASH3O75995 380 aa10.17□□□□□ -0.78
CASP4-208ENST00000530309 ZNF16P17020 682 aaPredicted RBP10.17□□□□□ -0.78
CASP4-208ENST00000530309 ZNF326Q5BKZ1 582 aaKnown RBP10.17□□□□□ -0.78
CASP4-208ENST00000530309 ZNF787Q6DD87 383 aa10.17□□□□□ -0.78
CASP4-208ENST00000530309 SNX29Q8TEQ0 813 aa10.17□□□□□ -0.78
CASP4-208ENST00000530309 ZNF428Q96B54 188 aa10.17□□□□□ -0.78
CASP4-208ENST00000530309 TARSP26639 723 aaKnown RBP10.16□□□□□ -0.78
CASP4-208ENST00000530309 VEGFBP49765 207 aa10.16□□□□□ -0.78
CASP4-208ENST00000530309 CTBSQ01459 385 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms