RNA–Protein interactions for RNA: ENST00000530278.5

NFRKB-207, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 3

Gene NFRKB, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-207ENST00000530278 NLRP10Q86W26 655 aa28.31■■■□□ 2.12
NFRKB-207ENST00000530278 GPBP1L1Q9HC44 474 aaPredicted RBP28.31■■■□□ 2.12
NFRKB-207ENST00000530278 FANCIQ9NVI1 1328 aa28.31■■■□□ 2.12
NFRKB-207ENST00000530278 SBF1O95248 1867 aa28.31■■■□□ 2.12
NFRKB-207ENST00000530278 RIC1Q4ADV7 1423 aa28.3■■■□□ 2.12
NFRKB-207ENST00000530278 NFKBIEO00221 500 aa28.29■■■□□ 2.12
NFRKB-207ENST00000530278 GOLGA2Q08379 1002 aa28.29■■■□□ 2.12
NFRKB-207ENST00000530278 RIC3Q7Z5B4 369 aa28.29■■■□□ 2.12
NFRKB-207ENST00000530278 ZNF428Q96B54 188 aa28.29■■■□□ 2.12
NFRKB-207ENST00000530278 TCERG1O14776 1098 aaKnown RBP28.28■■■□□ 2.12
NFRKB-207ENST00000530278 CRY2Q49AN0 593 aa28.28■■■□□ 2.12
NFRKB-207ENST00000530278 RPGRQ92834 1020 aaKnown RBP28.28■■■□□ 2.12
NFRKB-207ENST00000530278 TRMT112Q9UI30 125 aaKnown RBP28.28■■■□□ 2.12
NFRKB-207ENST00000530278 ATP5J2-PTCD1G3V325 749 aa28.27■■■□□ 2.12
NFRKB-207ENST00000530278 ALDH1B1P30837 517 aa28.27■■■□□ 2.12
NFRKB-207ENST00000530278 STK31Q9BXU1 1019 aa28.27■■■□□ 2.12
NFRKB-207ENST00000530278 LMNB1P20700 586 aa28.26■■■□□ 2.11
NFRKB-207ENST00000530278 NLRP3Q96P20 1036 aa28.26■■■□□ 2.11
NFRKB-207ENST00000530278 SPINK5Q9NQ38 1064 aaPredicted RBP28.26■■■□□ 2.11
NFRKB-207ENST00000530278 RNF123Q5XPI4 1314 aa28.25■■■□□ 2.11
NFRKB-207ENST00000530278 PRELPP51888 382 aa28.25■■■□□ 2.11
NFRKB-207ENST00000530278 SOGA3Q5TF21 947 aa28.25■■■□□ 2.11
NFRKB-207ENST00000530278 C3orf67Q6ZVT6 689 aa28.25■■■□□ 2.11
NFRKB-207ENST00000530278 ISCA1Q9BUE6 129 aa28.25■■■□□ 2.11
NFRKB-207ENST00000530278 FER1L6Q2WGJ9 1857 aa28.25■■■□□ 2.11
NFRKB-207ENST00000530278 CCER2I3L3R5 266 aa28.24■■■□□ 2.11
NFRKB-207ENST00000530278 SYNE4Q8N205 404 aa28.24■■■□□ 2.11
NFRKB-207ENST00000530278 CCDC88AQ3V6T2 1871 aa28.23■■■□□ 2.11
NFRKB-207ENST00000530278 SH3TC1Q8TE82 1336 aa28.23■■■□□ 2.11
NFRKB-207ENST00000530278 DDX58O95786 925 aaKnown RBP28.23■■■□□ 2.11
NFRKB-207ENST00000530278 EXOSC9Q06265 439 aaKnown RBP28.23■■■□□ 2.11
NFRKB-207ENST00000530278 SLC10A5Q5PT55 438 aa28.23■■■□□ 2.11
NFRKB-207ENST00000530278 C7orf43Q8WVR3 580 aa28.23■■■□□ 2.11
NFRKB-207ENST00000530278 HCLS1P14317 486 aaPredicted RBP28.22■■■□□ 2.11
NFRKB-207ENST00000530278 CCDC93Q567U6 631 aa28.22■■■□□ 2.11
NFRKB-207ENST00000530278 RBM17Q96I25 401 aaKnown RBP28.22■■■□□ 2.11
NFRKB-207ENST00000530278 MYD88Q99836 296 aa28.22■■■□□ 2.11
NFRKB-207ENST00000530278 MYH16Q9H6N6 1097 aa28.22■■■□□ 2.11
NFRKB-207ENST00000530278 OLFM4Q6UX06 510 aa28.21■■■□□ 2.11
NFRKB-207ENST00000530278 TAOK3Q9H2K8 898 aa28.21■■■□□ 2.11
NFRKB-207ENST00000530278 SLC4A2P04920 1241 aa28.2■■■□□ 2.1
NFRKB-207ENST00000530278 HOXA10P31260 410 aaPredicted RBP28.2■■■□□ 2.1
NFRKB-207ENST00000530278 LAMB2P55268 1798 aa28.19■■■□□ 2.1
NFRKB-207ENST00000530278 FAM89AQ96GI7 184 aa28.19■■■□□ 2.1
NFRKB-207ENST00000530278 ZNF521Q96K83 1311 aa28.18■■■□□ 2.1
NFRKB-207ENST00000530278 LTBP3Q9NS15 1303 aa28.18■■■□□ 2.1
NFRKB-207ENST00000530278 TIAM2Q8IVF5 1701 aa28.18■■■□□ 2.1
NFRKB-207ENST00000530278 VAMP4O75379 141 aa28.18■■■□□ 2.1
NFRKB-207ENST00000530278 RTL5Q5HYW3 569 aaPredicted RBP28.18■■■□□ 2.1
NFRKB-207ENST00000530278 TRIM28Q13263 835 aaKnown RBP28.17■■■□□ 2.1
NFRKB-207ENST00000530278 G2E3Q7L622 706 aa28.17■■■□□ 2.1
NFRKB-207ENST00000530278 CRAMP1Q96RY5 1269 aa28.17■■■□□ 2.1
NFRKB-207ENST00000530278 MAP3K2Q9Y2U5 619 aa28.17■■■□□ 2.1
NFRKB-207ENST00000530278 PI4KAP2A4QPH2 592 aa28.16■■■□□ 2.1
NFRKB-207ENST00000530278 C1QTNF8P60827 252 aa28.16■■■□□ 2.1
NFRKB-207ENST00000530278 DIEXFQ68CQ4 756 aaKnown RBP28.16■■■□□ 2.1
NFRKB-207ENST00000530278 PI4KAP1Q8N8J0 262 aa28.16■■■□□ 2.1
NFRKB-207ENST00000530278 METTL22Q9BUU2 404 aaPredicted RBP28.16■■■□□ 2.1
NFRKB-207ENST00000530278 ZC3H4Q9UPT8 1303 aaKnown RBP28.16■■■□□ 2.1
NFRKB-207ENST00000530278 DDX60Q8IY21 1712 aaKnown RBP28.15■■■□□ 2.1
NFRKB-207ENST00000530278 PPEF1O14829 653 aaPredicted RBP28.15■■■□□ 2.1
NFRKB-207ENST00000530278 KSR2Q6VAB6 950 aa28.15■■■□□ 2.1
NFRKB-207ENST00000530278 RTKN2Q8IZC4 609 aa28.15■■■□□ 2.1
NFRKB-207ENST00000530278 FKBP4Q02790 459 aaKnown RBP eCLIP28.14■■■□□ 2.1
NFRKB-207ENST00000530278 NMRK2Q9NPI5 230 aa28.14■■■□□ 2.1
NFRKB-207ENST00000530278 ABCC4O15439 1325 aa28.14■■■□□ 2.09
NFRKB-207ENST00000530278 KDM2BQ8NHM5 1336 aa28.14■■■□□ 2.09
NFRKB-207ENST00000530278 CCDC191Q8NCU4 936 aa28.13■■■□□ 2.09
NFRKB-207ENST00000530278 DICER1Q9UPY3 1922 aaKnown RBP28.13■■■□□ 2.09
NFRKB-207ENST00000530278 KIF3CO14782 793 aa28.12■■■□□ 2.09
NFRKB-207ENST00000530278 FLIIQ13045 1269 aa28.12■■■□□ 2.09
NFRKB-207ENST00000530278 ZBTB38Q8NAP3 1195 aaPredicted RBP28.12■■■□□ 2.09
NFRKB-207ENST00000530278 CWC25Q9NXE8 425 aaPredicted RBP28.12■■■□□ 2.09
NFRKB-207ENST00000530278 IRS4O14654 1257 aaPredicted RBP28.11■■■□□ 2.09
NFRKB-207ENST00000530278 DDX46Q7L014 1031 aaKnown RBP28.11■■■□□ 2.09
NFRKB-207ENST00000530278 SLC51AQ86UW1 340 aa28.11■■■□□ 2.09
NFRKB-207ENST00000530278 ZNF277Q9NRM2 450 aaPredicted RBP28.11■■■□□ 2.09
NFRKB-207ENST00000530278 FKBP5Q13451 457 aaPredicted RBP28.1■■■□□ 2.09
NFRKB-207ENST00000530278 CC2D2BQ6DHV5 1058 aa28.1■■■□□ 2.09
NFRKB-207ENST00000530278 GLTPD2A6NH11 291 aa28.09■■■□□ 2.09
NFRKB-207ENST00000530278 NEXNQ0ZGT2 675 aa28.09■■■□□ 2.09
NFRKB-207ENST00000530278 CACNA1FO60840 1977 aa28.09■■■□□ 2.09
NFRKB-207ENST00000530278 MIER1Q8N108 512 aa28.08■■■□□ 2.09
NFRKB-207ENST00000530278 JARID2Q92833 1246 aaPredicted RBP28.08■■■□□ 2.09
NFRKB-207ENST00000530278 TMX4Q9H1E5 349 aaPredicted RBP28.08■■■□□ 2.09
NFRKB-207ENST00000530278 SNED1Q8TER0 1413 aa28.08■■■□□ 2.09
NFRKB-207ENST00000530278 E9PSI1 815 aa28.07■■■□□ 2.08
NFRKB-207ENST00000530278 PCCAP05165 728 aaPredicted RBP28.07■■■□□ 2.08
NFRKB-207ENST00000530278 IGKV5-2P06315 115 aa28.07■■■□□ 2.08
NFRKB-207ENST00000530278 GRAPQ13588 217 aa28.07■■■□□ 2.08
NFRKB-207ENST00000530278 GRAPLQ8TC17 118 aaPredicted RBP28.07■■■□□ 2.08
NFRKB-207ENST00000530278 RRAGCQ9HB90 399 aa28.07■■■□□ 2.08
NFRKB-207ENST00000530278 TAF1P21675 1872 aa28.06■■■□□ 2.08
NFRKB-207ENST00000530278 SF3B3Q15393 1217 aaKnown RBP28.06■■■□□ 2.08
NFRKB-207ENST00000530278 PSMD1Q99460 953 aa28.06■■■□□ 2.08
NFRKB-207ENST00000530278 ATP6V0A2Q9Y487 856 aa28.06■■■□□ 2.08
NFRKB-207ENST00000530278 BBOX1O75936 387 aa28.05■■■□□ 2.08
NFRKB-207ENST00000530278 IARSP41252 1262 aaKnown RBP28.05■■■□□ 2.08
NFRKB-207ENST00000530278 CWF19L2Q2TBE0 894 aaKnown RBP28.05■■■□□ 2.08
NFRKB-207ENST00000530278 DPY19L2Q6NUT2 758 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms