RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 C1orf216Q8TAB5 229 aa8.33□□□□□ -1.08
AMBRA1-209ENST00000529963 LRFN2Q9ULH4 789 aa8.33□□□□□ -1.08
AMBRA1-209ENST00000529963 IVNS1ABPQ9Y6Y0 642 aa8.33□□□□□ -1.08
AMBRA1-209ENST00000529963 ARAP3Q8WWN8 1544 aa8.33□□□□□ -1.08
AMBRA1-209ENST00000529963 A0A1B0GTH6 734 aa8.32□□□□□ -1.08
AMBRA1-209ENST00000529963 SLC35F4A4IF30 521 aa8.32□□□□□ -1.08
AMBRA1-209ENST00000529963 HIRAP54198 1017 aaPredicted RBP8.32□□□□□ -1.08
AMBRA1-209ENST00000529963 ZNF211Q13398 564 aaPredicted RBP8.32□□□□□ -1.08
AMBRA1-209ENST00000529963 ARSJQ5FYB0 599 aaPredicted RBP8.32□□□□□ -1.08
AMBRA1-209ENST00000529963 COX20Q5RI15 118 aa8.32□□□□□ -1.08
AMBRA1-209ENST00000529963 BICDL1Q6ZP65 573 aa8.32□□□□□ -1.08
AMBRA1-209ENST00000529963 GTF3C2Q8WUA4 911 aaPredicted RBP8.32□□□□□ -1.08
AMBRA1-209ENST00000529963 CUEDC1Q9NWM3 386 aaPredicted RBP8.32□□□□□ -1.08
AMBRA1-209ENST00000529963 KLK14Q9P0G3 267 aa8.32□□□□□ -1.08
AMBRA1-209ENST00000529963 DYRK1BQ9Y463 629 aa8.32□□□□□ -1.08
AMBRA1-209ENST00000529963 EEA1Q15075 1411 aa8.32□□□□□ -1.08
AMBRA1-209ENST00000529963 SAMD9Q5K651 1589 aa8.32□□□□□ -1.08
AMBRA1-209ENST00000529963 ADAMTSL3P82987 1691 aa8.31□□□□□ -1.08
AMBRA1-209ENST00000529963 PTCD1O75127 700 aaKnown RBP8.31□□□□□ -1.08
AMBRA1-209ENST00000529963 TATP17735 454 aaPredicted RBP8.31□□□□□ -1.08
AMBRA1-209ENST00000529963 ARID4AP29374 1257 aaPredicted RBP8.31□□□□□ -1.08
AMBRA1-209ENST00000529963 VEGFBP49765 207 aa8.31□□□□□ -1.08
AMBRA1-209ENST00000529963 TXNDC2Q86VQ3 553 aa8.31□□□□□ -1.08
AMBRA1-209ENST00000529963 RHPN1Q8TCX5 695 aa8.31□□□□□ -1.08
AMBRA1-209ENST00000529963 ABCA9Q8IUA7 1624 aa8.3□□□□□ -1.08
AMBRA1-209ENST00000529963 RAPGEF6Q8TEU7 1601 aa8.3□□□□□ -1.08
AMBRA1-209ENST00000529963 F11P03951 625 aa8.3□□□□□ -1.08
AMBRA1-209ENST00000529963 DGKZQ13574 1117 aa8.3□□□□□ -1.08
AMBRA1-209ENST00000529963 C7orf43Q8WVR3 580 aa8.3□□□□□ -1.08
AMBRA1-209ENST00000529963 HSH2DQ96JZ2 352 aa8.3□□□□□ -1.08
AMBRA1-209ENST00000529963 DNMT3AQ9Y6K1 912 aaPredicted RBP8.3□□□□□ -1.08
AMBRA1-209ENST00000529963 TRIM26Q12899 539 aaPredicted RBP8.29□□□□□ -1.08
AMBRA1-209ENST00000529963 FAM26DQ5JW98 314 aa8.29□□□□□ -1.08
AMBRA1-209ENST00000529963 C16orf46Q6P387 395 aa8.29□□□□□ -1.08
AMBRA1-209ENST00000529963 KCTD17Q8N5Z5 321 aa8.29□□□□□ -1.08
AMBRA1-209ENST00000529963 ZNF280CQ8ND82 737 aa8.29□□□□□ -1.08
AMBRA1-209ENST00000529963 ZDHHC3Q9NYG2 299 aa8.29□□□□□ -1.08
AMBRA1-209ENST00000529963 NEO1Q92859 1461 aa8.29□□□□□ -1.08
AMBRA1-209ENST00000529963 KCNA1Q09470 495 aa8.29□□□□□ -1.08
AMBRA1-209ENST00000529963 RTN1Q16799 776 aa8.29□□□□□ -1.08
AMBRA1-209ENST00000529963 LRRC69Q6ZNQ3 347 aa8.29□□□□□ -1.08
AMBRA1-209ENST00000529963 COL26A1Q96A83 441 aa8.29□□□□□ -1.08
AMBRA1-209ENST00000529963 ZIC5Q96T25 663 aa8.29□□□□□ -1.08
AMBRA1-209ENST00000529963 A0A1W2PNR3 127 aa8.28□□□□□ -1.08
AMBRA1-209ENST00000529963 PPFIA3O75145 1194 aa8.28□□□□□ -1.08
AMBRA1-209ENST00000529963 RAPGEF3O95398 923 aa8.28□□□□□ -1.08
AMBRA1-209ENST00000529963 THBS1P07996 1170 aa8.28□□□□□ -1.08
AMBRA1-209ENST00000529963 RANGAP1P46060 587 aaPredicted RBP8.28□□□□□ -1.08
AMBRA1-209ENST00000529963 C1orf53Q5VUE5 145 aa8.28□□□□□ -1.08
AMBRA1-209ENST00000529963 CCER1Q8TC90 406 aaPredicted RBP8.28□□□□□ -1.08
AMBRA1-209ENST00000529963 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.28□□□□□ -1.082e-7■■■■■ 86.5
AMBRA1-209ENST00000529963 NUP153P49790 1475 aaKnown RBP8.27□□□□□ -1.08
AMBRA1-209ENST00000529963 FHOD3Q2V2M9 1422 aa8.27□□□□□ -1.08
AMBRA1-209ENST00000529963 TNFRSF10BO14763 440 aa8.27□□□□□ -1.09
AMBRA1-209ENST00000529963 DBN1Q16643 649 aa8.27□□□□□ -1.09
AMBRA1-209ENST00000529963 PGBD3Q8N328 593 aa8.27□□□□□ -1.09
AMBRA1-209ENST00000529963 SUSD3Q96L08 255 aa8.27□□□□□ -1.09
AMBRA1-209ENST00000529963 BCS1LQ9Y276 419 aa8.27□□□□□ -1.09
AMBRA1-209ENST00000529963 PLEKHD1A6NEE1 506 aa8.26□□□□□ -1.09
AMBRA1-209ENST00000529963 ITGA6P23229 1130 aa8.26□□□□□ -1.09
AMBRA1-209ENST00000529963 MYO19Q96H55 970 aa8.26□□□□□ -1.09
AMBRA1-209ENST00000529963 MTMR7Q9Y216 660 aa8.26□□□□□ -1.09
AMBRA1-209ENST00000529963 ARID4BQ4LE39 1312 aaPredicted RBP8.25□□□□□ -1.09
AMBRA1-209ENST00000529963 CDC14CA4D256 554 aa8.25□□□□□ -1.09
AMBRA1-209ENST00000529963 H3BRB1 525 aa8.25□□□□□ -1.09
AMBRA1-209ENST00000529963 C11orf91Q3C1V1 193 aa8.25□□□□□ -1.09
AMBRA1-209ENST00000529963 HELQQ8TDG4 1101 aa8.25□□□□□ -1.09
AMBRA1-209ENST00000529963 TUT1Q9H6E5 874 aaKnown RBP8.25□□□□□ -1.09
AMBRA1-209ENST00000529963 NEUROD4Q9HD90 331 aa8.25□□□□□ -1.09
AMBRA1-209ENST00000529963 GNEQ9Y223 722 aaKnown RBP8.25□□□□□ -1.09
AMBRA1-209ENST00000529963 GJA3Q9Y6H8 435 aa8.25□□□□□ -1.09
AMBRA1-209ENST00000529963 BCORL1Q5H9F3 1711 aa8.25□□□□□ -1.09
AMBRA1-209ENST00000529963 EFCAB5A4FU69 1503 aa8.25□□□□□ -1.09
AMBRA1-209ENST00000529963 ZBTB39O15060 712 aa8.24□□□□□ -1.09
AMBRA1-209ENST00000529963 ETFBKMTQ8IXQ9 262 aa8.24□□□□□ -1.09
AMBRA1-209ENST00000529963 IFT43Q96FT9 208 aa8.24□□□□□ -1.09
AMBRA1-209ENST00000529963 NUCKS1Q9H1E3 243 aaKnown RBP8.24□□□□□ -1.09
AMBRA1-209ENST00000529963 CRISPLD1Q9H336 500 aa8.24□□□□□ -1.09
AMBRA1-209ENST00000529963 DENND4BO75064 1496 aaPredicted RBP8.24□□□□□ -1.09
AMBRA1-209ENST00000529963 GPR25O00155 361 aa8.24□□□□□ -1.09
AMBRA1-209ENST00000529963 MPSTP25325 297 aa8.24□□□□□ -1.09
AMBRA1-209ENST00000529963 HSPA2P54652 639 aa8.24□□□□□ -1.09
AMBRA1-209ENST00000529963 VWA5B2Q8N398 1253 aa8.24□□□□□ -1.09
AMBRA1-209ENST00000529963 GTPBP3Q969Y2 492 aaKnown RBP8.24□□□□□ -1.09
AMBRA1-209ENST00000529963 GZF1Q9H116 711 aaPredicted RBP8.24□□□□□ -1.09
AMBRA1-209ENST00000529963 STIM2Q9P246 746 aa8.24□□□□□ -1.09
AMBRA1-209ENST00000529963 MADDQ8WXG6 1647 aa8.23□□□□□ -1.09
AMBRA1-209ENST00000529963 FRMPD1Q5SYB0 1578 aa8.23□□□□□ -1.09
AMBRA1-209ENST00000529963 AKNAQ7Z591 1439 aa8.23□□□□□ -1.09
AMBRA1-209ENST00000529963 ZBTB7CA1YPR0 619 aa8.23□□□□□ -1.09
AMBRA1-209ENST00000529963 EFHC2Q5JST6 749 aa8.23□□□□□ -1.09
AMBRA1-209ENST00000529963 ATCAYQ86WG3 371 aa8.23□□□□□ -1.09
AMBRA1-209ENST00000529963 TRIM22Q8IYM9 498 aa8.23□□□□□ -1.09
AMBRA1-209ENST00000529963 ZNF837Q96EG3 531 aaPredicted RBP8.23□□□□□ -1.09
AMBRA1-209ENST00000529963 ZCCHC2Q9C0B9 1178 aaKnown RBP8.23□□□□□ -1.09
AMBRA1-209ENST00000529963 NXF1Q9UBU9 619 aaKnown RBP8.23□□□□□ -1.09
AMBRA1-209ENST00000529963 USP20Q9Y2K6 914 aa8.23□□□□□ -1.09
AMBRA1-209ENST00000529963 CFAP74Q9C0B2 1584 aa8.22□□□□□ -1.09
AMBRA1-209ENST00000529963 SOWAHDA6NJG2 315 aa8.22□□□□□ -1.09
AMBRA1-209ENST00000529963 ICMTO60725 284 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms