RNA–Protein interactions for RNA: ENST00000529922.1

AP001999.3-201, humanhuman

TSL 2 BASIC

Gene AP001999.3, Length 455 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.3-201ENST00000529922 NEUROD2Q15784 382 aa12.09□□□□□ -0.47
AP001999.3-201ENST00000529922 KRT24Q2M2I5 525 aa12.09□□□□□ -0.47
AP001999.3-201ENST00000529922 CC2D2BQ6DHV5 1058 aa12.09□□□□□ -0.47
AP001999.3-201ENST00000529922 DDX21Q9NR30 783 aaKnown RBP eCLIP12.09□□□□□ -0.47
AP001999.3-201ENST00000529922 FER1L6Q2WGJ9 1857 aa12.08□□□□□ -0.48
AP001999.3-201ENST00000529922 DDNO94850 711 aaPredicted RBP12.08□□□□□ -0.48
AP001999.3-201ENST00000529922 HOXB7P09629 217 aa12.08□□□□□ -0.48
AP001999.3-201ENST00000529922 ZNF853P0CG23 659 aa12.08□□□□□ -0.48
AP001999.3-201ENST00000529922 C3orf67Q6ZVT6 689 aa12.08□□□□□ -0.48
AP001999.3-201ENST00000529922 COPS6Q7L5N1 327 aa12.08□□□□□ -0.48
AP001999.3-201ENST00000529922 PPP1R42Q7Z4L9 355 aa12.08□□□□□ -0.48
AP001999.3-201ENST00000529922 L3MBTL3Q96JM7 780 aaPredicted RBP12.08□□□□□ -0.48
AP001999.3-201ENST00000529922 CFAP44Q96MT7 982 aa12.08□□□□□ -0.48
AP001999.3-201ENST00000529922 CRAMP1Q96RY5 1269 aa12.08□□□□□ -0.48
AP001999.3-201ENST00000529922 PSMD1Q99460 953 aa12.08□□□□□ -0.48
AP001999.3-201ENST00000529922 ZNF277Q9NRM2 450 aaPredicted RBP12.08□□□□□ -0.48
AP001999.3-201ENST00000529922 HTRA3P83110 453 aa12.07□□□□□ -0.48
AP001999.3-201ENST00000529922 HSP90AB3PQ58FF7 597 aa12.07□□□□□ -0.48
AP001999.3-201ENST00000529922 SYNE4Q8N205 404 aa12.07□□□□□ -0.48
AP001999.3-201ENST00000529922 XAGE3Q8WTP9 111 aa12.07□□□□□ -0.48
AP001999.3-201ENST00000529922 UTP14AQ9BVJ6 771 aaKnown RBP12.07□□□□□ -0.48
AP001999.3-201ENST00000529922 LAMB4A4D0S4 1761 aa12.07□□□□□ -0.48
AP001999.3-201ENST00000529922 RNF123Q5XPI4 1314 aa12.07□□□□□ -0.48
AP001999.3-201ENST00000529922 FZD9O00144 591 aa12.06□□□□□ -0.48
AP001999.3-201ENST00000529922 IARSP41252 1262 aaKnown RBP12.06□□□□□ -0.48
AP001999.3-201ENST00000529922 TCIRG1Q13488 830 aa12.06□□□□□ -0.48
AP001999.3-201ENST00000529922 GRIPAP1Q4V328 841 aa12.06□□□□□ -0.48
AP001999.3-201ENST00000529922 NLRP10Q86W26 655 aa12.06□□□□□ -0.48
AP001999.3-201ENST00000529922 JMYQ8N9B5 988 aa12.06□□□□□ -0.48
AP001999.3-201ENST00000529922 KLRG1Q96E93 195 aa12.06□□□□□ -0.48
AP001999.3-201ENST00000529922 NLRP3Q96P20 1036 aa12.06□□□□□ -0.48
AP001999.3-201ENST00000529922 U3KPZ7 1027 aaPredicted RBP12.06□□□□□ -0.48
AP001999.3-201ENST00000529922 NECTIN2Q92692 538 aa12.05□□□□□ -0.48
AP001999.3-201ENST00000529922 RPGRQ92834 1020 aaKnown RBP12.05□□□□□ -0.48
AP001999.3-201ENST00000529922 RBM17Q96I25 401 aaKnown RBP12.05□□□□□ -0.48
AP001999.3-201ENST00000529922 CHPF2Q9P2E5 772 aa12.05□□□□□ -0.48
AP001999.3-201ENST00000529922 LAS1LQ9Y4W2 734 aaKnown RBP12.05□□□□□ -0.48
AP001999.3-201ENST00000529922 WDR90Q96KV7 1748 aa12.05□□□□□ -0.48
AP001999.3-201ENST00000529922 TNRC6CQ9HCJ0 1690 aaKnown RBP12.04□□□□□ -0.48
AP001999.3-201ENST00000529922 APAF1O14727 1248 aa12.04□□□□□ -0.48
AP001999.3-201ENST00000529922 POTEIP0CG38 1075 aa12.04□□□□□ -0.48
AP001999.3-201ENST00000529922 POTEJP0CG39 1038 aa12.04□□□□□ -0.48
AP001999.3-201ENST00000529922 AIMP1Q12904 312 aaKnown RBP12.04□□□□□ -0.48
AP001999.3-201ENST00000529922 HDGFL1Q5TGJ6 251 aa12.04□□□□□ -0.48
AP001999.3-201ENST00000529922 TAF1DQ9H5J8 278 aaPredicted RBP12.04□□□□□ -0.48
AP001999.3-201ENST00000529922 MBIPQ9NS73 344 aa12.04□□□□□ -0.48
AP001999.3-201ENST00000529922 ZNF541Q9H0D2 1346 aa12.04□□□□□ -0.48
AP001999.3-201ENST00000529922 NUP98P52948 1817 aa12.04□□□□□ -0.48
AP001999.3-201ENST00000529922 IQCA1LA6NCM1 817 aa12.03□□□□□ -0.48
AP001999.3-201ENST00000529922 TRIM28Q13263 835 aaKnown RBP12.03□□□□□ -0.48
AP001999.3-201ENST00000529922 DUSP27Q5VZP5 1158 aa12.03□□□□□ -0.48
AP001999.3-201ENST00000529922 CHADLQ6NUI6 762 aa12.03□□□□□ -0.48
AP001999.3-201ENST00000529922 ANKRD13DQ6ZTN6 518 aa12.03□□□□□ -0.48
AP001999.3-201ENST00000529922 SLC51AQ86UW1 340 aa12.03□□□□□ -0.48
AP001999.3-201ENST00000529922 PLBD2Q8NHP8 589 aa12.03□□□□□ -0.48
AP001999.3-201ENST00000529922 ISCA1Q9BUE6 129 aa12.03□□□□□ -0.48
AP001999.3-201ENST00000529922 IFT57Q9NWB7 429 aa12.03□□□□□ -0.48
AP001999.3-201ENST00000529922 DBF4Q9UBU7 674 aaPredicted RBP12.03□□□□□ -0.48
AP001999.3-201ENST00000529922 ATP6V0A2Q9Y487 856 aa12.03□□□□□ -0.48
AP001999.3-201ENST00000529922 DICER1Q9UPY3 1922 aaKnown RBP12.03□□□□□ -0.48
AP001999.3-201ENST00000529922 ARFGEF2Q9Y6D5 1785 aa12.02□□□□□ -0.48
AP001999.3-201ENST00000529922 CCDC88AQ3V6T2 1871 aa12.02□□□□□ -0.48
AP001999.3-201ENST00000529922 PPEF1O14829 653 aaPredicted RBP12.02□□□□□ -0.49
AP001999.3-201ENST00000529922 BBOX1O75936 387 aa12.02□□□□□ -0.49
AP001999.3-201ENST00000529922 HCLS1P14317 486 aaPredicted RBP12.02□□□□□ -0.49
AP001999.3-201ENST00000529922 GPC2Q8N158 579 aa12.02□□□□□ -0.49
AP001999.3-201ENST00000529922 HYPKQ9NX55 129 aa12.02□□□□□ -0.49
AP001999.3-201ENST00000529922 SH3TC1Q8TE82 1336 aa12.02□□□□□ -0.49
AP001999.3-201ENST00000529922 GNAI1P63096 354 aa12.01□□□□□ -0.49
AP001999.3-201ENST00000529922 CALD1Q05682 793 aaKnown RBP12.01□□□□□ -0.49
AP001999.3-201ENST00000529922 SAMD1Q6SPF0 538 aaPredicted RBP12.01□□□□□ -0.49
AP001999.3-201ENST00000529922 LDHDQ86WU2 507 aa12.01□□□□□ -0.49
AP001999.3-201ENST00000529922 SP8Q8IXZ3 490 aa12.01□□□□□ -0.49
AP001999.3-201ENST00000529922 JDP2Q8WYK2 163 aa12.01□□□□□ -0.49
AP001999.3-201ENST00000529922 RTFDC1Q9BY42 306 aaPredicted RBP12.01□□□□□ -0.49
AP001999.3-201ENST00000529922 VPS33BQ9H267 617 aa12.01□□□□□ -0.49
AP001999.3-201ENST00000529922 TRMT112Q9UI30 125 aaKnown RBP12.01□□□□□ -0.49
AP001999.3-201ENST00000529922 ABCC4O15439 1325 aa12.01□□□□□ -0.49
AP001999.3-201ENST00000529922 TIAM2Q8IVF5 1701 aa12□□□□□ -0.49
AP001999.3-201ENST00000529922 ITGBL1O95965 494 aaPredicted RBP12□□□□□ -0.49
AP001999.3-201ENST00000529922 CCDC184Q52MB2 194 aa12□□□□□ -0.49
AP001999.3-201ENST00000529922 IFFO2Q5TF58 517 aa12□□□□□ -0.49
AP001999.3-201ENST00000529922 HACL1Q9UJ83 578 aa12□□□□□ -0.49
AP001999.3-201ENST00000529922 PASKQ96RG2 1323 aa12□□□□□ -0.49
AP001999.3-201ENST00000529922 TCERG1O14776 1098 aaKnown RBP11.99□□□□□ -0.49
AP001999.3-201ENST00000529922 EPHX2P34913 555 aa11.99□□□□□ -0.49
AP001999.3-201ENST00000529922 GRAPQ13588 217 aa11.99□□□□□ -0.49
AP001999.3-201ENST00000529922 SF3B3Q15393 1217 aaKnown RBP11.99□□□□□ -0.49
AP001999.3-201ENST00000529922 PNMA8AQ86V59 439 aaPredicted RBP11.99□□□□□ -0.49
AP001999.3-201ENST00000529922 LARGE2Q8N3Y3 721 aa11.99□□□□□ -0.49
AP001999.3-201ENST00000529922 GRAPLQ8TC17 118 aaPredicted RBP11.99□□□□□ -0.49
AP001999.3-201ENST00000529922 COL4A5P29400 1685 aa11.98□□□□□ -0.49
AP001999.3-201ENST00000529922 ZEB1P37275 1124 aaPredicted RBP11.98□□□□□ -0.49
AP001999.3-201ENST00000529922 EIF6P56537 245 aaKnown RBP11.98□□□□□ -0.49
AP001999.3-201ENST00000529922 CCDC27Q2M243 656 aa11.98□□□□□ -0.49
AP001999.3-201ENST00000529922 DDX46Q7L014 1031 aaKnown RBP11.98□□□□□ -0.49
AP001999.3-201ENST00000529922 C8orf58Q8NAV2 365 aa11.98□□□□□ -0.49
AP001999.3-201ENST00000529922 FAM89AQ96GI7 184 aa11.98□□□□□ -0.49
AP001999.3-201ENST00000529922 TMX4Q9H1E5 349 aaPredicted RBP11.98□□□□□ -0.49
AP001999.3-201ENST00000529922 CREBZFQ9NS37 354 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms