RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 PRKAR2BP31323 418 aa13.94□□□□□ -0.18
COPB1-207ENST00000529866 EPS15P42566 896 aa13.94□□□□□ -0.18
COPB1-207ENST00000529866 NIM1KQ8IY84 436 aa13.94□□□□□ -0.18
COPB1-207ENST00000529866 SNED1Q8TER0 1413 aa13.94□□□□□ -0.18
COPB1-207ENST00000529866 TMX4Q9H1E5 349 aaPredicted RBP13.94□□□□□ -0.18
COPB1-207ENST00000529866 THSD7BQ9C0I4 1608 aa13.93□□□□□ -0.18
COPB1-207ENST00000529866 KIF7Q2M1P5 1343 aa13.93□□□□□ -0.18
COPB1-207ENST00000529866 ABCC12Q96J65 1359 aa13.93□□□□□ -0.18
COPB1-207ENST00000529866 CACNA1SQ13698 1873 aa13.93□□□□□ -0.18
COPB1-207ENST00000529866 NBPF26B4DH59 902 aa13.92□□□□□ -0.18
COPB1-207ENST00000529866 TRAF5O00463 557 aa13.92□□□□□ -0.18
COPB1-207ENST00000529866 PER1O15534 1290 aaPredicted RBP13.92□□□□□ -0.18
COPB1-207ENST00000529866 CST9Q5W186 159 aa13.92□□□□□ -0.18
COPB1-207ENST00000529866 NBPF10Q6P3W6 841 aaKnown RBP13.92□□□□□ -0.18
COPB1-207ENST00000529866 NBPF15Q8N660 670 aa13.92□□□□□ -0.18
COPB1-207ENST00000529866 CFAP53Q96M91 514 aa13.92□□□□□ -0.18
COPB1-207ENST00000529866 MCOLN1Q9GZU1 580 aa13.92□□□□□ -0.18
COPB1-207ENST00000529866 ADARB2Q9NS39 739 aaKnown RBP13.92□□□□□ -0.18
COPB1-207ENST00000529866 TSKSQ9UJT2 592 aa13.92□□□□□ -0.18
COPB1-207ENST00000529866 NPC1L1Q9UHC9 1359 aa13.92□□□□□ -0.18
COPB1-207ENST00000529866 PPEF1O14829 653 aaPredicted RBP13.91□□□□□ -0.18
COPB1-207ENST00000529866 CELF2O95319 508 aaKnown RBP13.91□□□□□ -0.18
COPB1-207ENST00000529866 HOXA10P31260 410 aaPredicted RBP13.91□□□□□ -0.18
COPB1-207ENST00000529866 BRPF1P55201 1214 aaPredicted RBP13.91□□□□□ -0.18
COPB1-207ENST00000529866 FMR1Q06787 632 aaKnown RBP eCLIP13.91□□□□□ -0.185e-7■■■■■ 34.4
COPB1-207ENST00000529866 HLFQ16534 295 aa13.91□□□□□ -0.18
COPB1-207ENST00000529866 NUTM1Q86Y26 1132 aa13.91□□□□□ -0.18
COPB1-207ENST00000529866 RBM17Q96I25 401 aaKnown RBP13.91□□□□□ -0.18
COPB1-207ENST00000529866 HHIPL1Q96JK4 782 aa13.91□□□□□ -0.18
COPB1-207ENST00000529866 PHACTR3Q96KR7 559 aa13.91□□□□□ -0.18
COPB1-207ENST00000529866 RSPH6AQ9H0K4 717 aa13.91□□□□□ -0.18
COPB1-207ENST00000529866 NUDCQ9Y266 331 aa13.91□□□□□ -0.18
COPB1-207ENST00000529866 IBTKQ9P2D0 1353 aaPredicted RBP13.91□□□□□ -0.18
COPB1-207ENST00000529866 SIPA1L3O60292 1781 aaPredicted RBP13.91□□□□□ -0.18
COPB1-207ENST00000529866 RIC1Q4ADV7 1423 aa13.9□□□□□ -0.18
COPB1-207ENST00000529866 ERVV-1B6SEH8 477 aa13.9□□□□□ -0.18
COPB1-207ENST00000529866 PPIP5K2O43314 1243 aa13.9□□□□□ -0.18
COPB1-207ENST00000529866 AOC2O75106 756 aa13.9□□□□□ -0.18
COPB1-207ENST00000529866 KIF6Q6ZMV9 814 aa13.9□□□□□ -0.18
COPB1-207ENST00000529866 MCM10Q7L590 875 aa13.9□□□□□ -0.18
COPB1-207ENST00000529866 SAPCD2Q86UD0 394 aa13.9□□□□□ -0.18
COPB1-207ENST00000529866 CRAMP1Q96RY5 1269 aa13.89□□□□□ -0.19
COPB1-207ENST00000529866 VPS33BQ9H267 617 aa13.89□□□□□ -0.19
COPB1-207ENST00000529866 GPRC5DQ9NZD1 345 aa13.89□□□□□ -0.19
COPB1-207ENST00000529866 MAP3K15Q6ZN16 1313 aa13.89□□□□□ -0.19
COPB1-207ENST00000529866 COL4A5P29400 1685 aa13.88□□□□□ -0.19
COPB1-207ENST00000529866 HTATSF1O43719 755 aaKnown RBP13.88□□□□□ -0.19
COPB1-207ENST00000529866 CNGB1Q14028 1251 aaPredicted RBP13.88□□□□□ -0.19
COPB1-207ENST00000529866 SUPT20HQ8NEM7 779 aa13.88□□□□□ -0.19
COPB1-207ENST00000529866 CDHR2Q9BYE9 1310 aa13.88□□□□□ -0.19
COPB1-207ENST00000529866 PDE4DIPQ5VU43 2346 aa13.87□□□□□ -0.19
COPB1-207ENST00000529866 TCERG1O14776 1098 aaKnown RBP13.87□□□□□ -0.19
COPB1-207ENST00000529866 U2AF1L5P0DN76 240 aaPredicted RBP13.87□□□□□ -0.19
COPB1-207ENST00000529866 U2AF1Q01081 240 aaKnown RBP eCLIP13.87□□□□□ -0.19
COPB1-207ENST00000529866 DGKZQ13574 1117 aa13.87□□□□□ -0.19
COPB1-207ENST00000529866 AOC3Q16853 763 aa13.87□□□□□ -0.19
COPB1-207ENST00000529866 NGEFQ8N5V2 710 aa13.87□□□□□ -0.19
COPB1-207ENST00000529866 ZC3H15Q8WU90 426 aaKnown RBP13.87□□□□□ -0.19
COPB1-207ENST00000529866 ZNF408Q9H9D4 720 aa13.87□□□□□ -0.19
COPB1-207ENST00000529866 LTBP1Q14766 1721 aa13.87□□□□□ -0.19
COPB1-207ENST00000529866 GPTP24298 496 aa13.86□□□□□ -0.19
COPB1-207ENST00000529866 NOGQ13253 232 aa13.86□□□□□ -0.19
COPB1-207ENST00000529866 TAF7Q15545 349 aaPredicted RBP13.86□□□□□ -0.19
COPB1-207ENST00000529866 ZNRF3Q9ULT6 936 aa13.86□□□□□ -0.19
COPB1-207ENST00000529866 GMPSP49915 693 aaPredicted RBP13.85□□□□□ -0.19
COPB1-207ENST00000529866 DCTN1Q14203 1278 aa13.85□□□□□ -0.19
COPB1-207ENST00000529866 CIAPIN1Q6FI81 312 aa13.85□□□□□ -0.19
COPB1-207ENST00000529866 CDC37L1Q7L3B6 337 aa13.85□□□□□ -0.19
COPB1-207ENST00000529866 PPP1R42Q7Z4L9 355 aa13.85□□□□□ -0.19
COPB1-207ENST00000529866 PNISRQ8TF01 805 aaKnown RBP13.85□□□□□ -0.19
COPB1-207ENST00000529866 NLRP3Q96P20 1036 aa13.85□□□□□ -0.19
COPB1-207ENST00000529866 BCL2L13Q9BXK5 485 aa13.85□□□□□ -0.19
COPB1-207ENST00000529866 GLIS2Q9BZE0 524 aaPredicted RBP13.85□□□□□ -0.19
COPB1-207ENST00000529866 ATP6V0A2Q9Y487 856 aa13.85□□□□□ -0.19
COPB1-207ENST00000529866 UBN2Q6ZU65 1347 aa13.85□□□□□ -0.19
COPB1-207ENST00000529866 CXCL9Q07325 125 aa13.84□□□□□ -0.19
COPB1-207ENST00000529866 TNIP1Q15025 636 aa13.84□□□□□ -0.19
COPB1-207ENST00000529866 PARP10Q53GL7 1025 aa13.84□□□□□ -0.19
COPB1-207ENST00000529866 SUSD4Q5VX71 490 aa13.84□□□□□ -0.19
COPB1-207ENST00000529866 ZBTB3Q9H5J0 574 aa13.84□□□□□ -0.19
COPB1-207ENST00000529866 PGAP2Q9UHJ9 254 aa13.84□□□□□ -0.19
COPB1-207ENST00000529866 RRP7AQ9Y3A4 280 aaKnown RBP13.84□□□□□ -0.19
COPB1-207ENST00000529866 NTSR2O95665 410 aa13.83□□□□□ -0.2
COPB1-207ENST00000529866 NEFMP07197 916 aa13.83□□□□□ -0.2
COPB1-207ENST00000529866 DPP8Q6V1X1 898 aaPredicted RBP13.83□□□□□ -0.2
COPB1-207ENST00000529866 RTFDC1Q9BY42 306 aaPredicted RBP13.83□□□□□ -0.2
COPB1-207ENST00000529866 HUNKP57058 714 aa13.82□□□□□ -0.2
COPB1-207ENST00000529866 TTLL7Q6ZT98 887 aa13.82□□□□□ -0.2
COPB1-207ENST00000529866 ZNF34Q8IZ26 560 aa13.82□□□□□ -0.2
COPB1-207ENST00000529866 H7C1D1 291 aa13.81□□□□□ -0.2
COPB1-207ENST00000529866 MYL6BP14649 208 aa13.81□□□□□ -0.2
COPB1-207ENST00000529866 KIAA2012Q0VF49 1180 aa13.81□□□□□ -0.2
COPB1-207ENST00000529866 GIGYF2Q6Y7W6 1299 aaKnown RBP13.81□□□□□ -0.2
COPB1-207ENST00000529866 UTP14AQ9BVJ6 771 aaKnown RBP13.81□□□□□ -0.2
COPB1-207ENST00000529866 SAGE1Q9NXZ1 904 aa13.81□□□□□ -0.2
COPB1-207ENST00000529866 MIS18AQ9NYP9 233 aa13.81□□□□□ -0.2
COPB1-207ENST00000529866 ABCC4O15439 1325 aa13.81□□□□□ -0.2
COPB1-207ENST00000529866 ERBB4Q15303 1308 aa13.81□□□□□ -0.2
COPB1-207ENST00000529866 TRPM7Q96QT4 1865 aa13.8□□□□□ -0.2
COPB1-207ENST00000529866 BBOX1O75936 387 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms