RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 PPP1R42Q7Z4L9 355 aa22.16■■□□□ 1.14
CLP1-204ENST00000529773 NBPF5PQ86XG9 351 aaPredicted RBP22.16■■□□□ 1.14
CLP1-204ENST00000529773 CNBD1Q8NA66 436 aa22.16■■□□□ 1.14
CLP1-204ENST00000529773 TPTE2Q6XPS3 522 aa22.15■■□□□ 1.14
CLP1-204ENST00000529773 ABCC12Q96J65 1359 aa22.14■■□□□ 1.14
CLP1-204ENST00000529773 TNRC6CQ9HCJ0 1690 aaKnown RBP22.14■■□□□ 1.14
CLP1-204ENST00000529773 ALDH1L1O75891 902 aa22.14■■□□□ 1.13
CLP1-204ENST00000529773 ZKSCAN2Q63HK3 967 aa22.14■■□□□ 1.13
CLP1-204ENST00000529773 UTP14AQ9BVJ6 771 aaKnown RBP22.14■■□□□ 1.13
CLP1-204ENST00000529773 CWC25Q9NXE8 425 aaPredicted RBP22.14■■□□□ 1.13
CLP1-204ENST00000529773 CD2APQ9Y5K6 639 aa22.14■■□□□ 1.13
CLP1-204ENST00000529773 SRCAPQ6ZRS2 3230 aa22.13■■□□□ 1.13
CLP1-204ENST00000529773 GCKRQ14397 625 aa22.13■■□□□ 1.13
CLP1-204ENST00000529773 CWF19L2Q2TBE0 894 aaKnown RBP22.13■■□□□ 1.13
CLP1-204ENST00000529773 DDX60Q8IY21 1712 aaKnown RBP22.13■■□□□ 1.13
CLP1-204ENST00000529773 SH3TC1Q8TE82 1336 aa22.12■■□□□ 1.13
CLP1-204ENST00000529773 ZBTB38Q8NAP3 1195 aaPredicted RBP22.12■■□□□ 1.13
CLP1-204ENST00000529773 DLEC1Q9Y238 1755 aa22.12■■□□□ 1.13
CLP1-204ENST00000529773 PCCAP05165 728 aaPredicted RBP22.11■■□□□ 1.13
CLP1-204ENST00000529773 CCT4P50991 539 aaKnown RBP22.11■■□□□ 1.13
CLP1-204ENST00000529773 ST5P78524 1137 aa22.11■■□□□ 1.13
CLP1-204ENST00000529773 SLC10A5Q5PT55 438 aa22.11■■□□□ 1.13
CLP1-204ENST00000529773 INTS3Q68E01 1043 aaKnown RBP22.11■■□□□ 1.13
CLP1-204ENST00000529773 BRIP1Q9BX63 1249 aa22.11■■□□□ 1.13
CLP1-204ENST00000529773 SRCIN1Q9C0H9 1055 aa22.11■■□□□ 1.13
CLP1-204ENST00000529773 COL11A2P13942 1736 aaPredicted RBP22.11■■□□□ 1.13
CLP1-204ENST00000529773 CDHR2Q9BYE9 1310 aa22.1■■□□□ 1.13
CLP1-204ENST00000529773 KLRG2A4D1S0 409 aaPredicted RBP22.1■■□□□ 1.13
CLP1-204ENST00000529773 FRAT1Q92837 279 aaPredicted RBP22.1■■□□□ 1.13
CLP1-204ENST00000529773 TRMT112Q9UI30 125 aaKnown RBP22.1■■□□□ 1.13
CLP1-204ENST00000529773 UTYO14607 1347 aa22.09■■□□□ 1.13
CLP1-204ENST00000529773 CASP7P55210 303 aa22.09■■□□□ 1.13
CLP1-204ENST00000529773 ERFEQ4G0M1 354 aa22.09■■□□□ 1.13
CLP1-204ENST00000529773 SLC4A10Q6U841 1118 aa22.09■■□□□ 1.13
CLP1-204ENST00000529773 NUTM1Q86Y26 1132 aa22.09■■□□□ 1.13
CLP1-204ENST00000529773 H7C1W4 665 aa22.08■■□□□ 1.13
CLP1-204ENST00000529773 FHDC1Q9C0D6 1143 aaPredicted RBP22.08■■□□□ 1.13
CLP1-204ENST00000529773 PPP1R1BQ9UD71 204 aaPredicted RBP22.08■■□□□ 1.13
CLP1-204ENST00000529773 PDZRN3Q9UPQ7 1066 aa22.08■■□□□ 1.13
CLP1-204ENST00000529773 TNNQ9UQP3 1299 aa22.08■■□□□ 1.13
CLP1-204ENST00000529773 FAM177BA6PVY3 158 aa22.07■■□□□ 1.12
CLP1-204ENST00000529773 TGFB2P61812 414 aa22.07■■□□□ 1.12
CLP1-204ENST00000529773 CRY2Q49AN0 593 aa22.07■■□□□ 1.12
CLP1-204ENST00000529773 BRCA1P38398 1863 aaKnown RBP22.07■■□□□ 1.12
CLP1-204ENST00000529773 GRM8O00222 908 aa22.06■■□□□ 1.12
CLP1-204ENST00000529773 FAM89AQ96GI7 184 aa22.06■■□□□ 1.12
CLP1-204ENST00000529773 MS4A1P11836 297 aa22.05■■□□□ 1.12
CLP1-204ENST00000529773 GTF2E1P29083 439 aaPredicted RBP22.05■■□□□ 1.12
CLP1-204ENST00000529773 PDE6BP35913 854 aa22.05■■□□□ 1.12
CLP1-204ENST00000529773 DZIP1LQ8IYY4 767 aaKnown RBP22.05■■□□□ 1.12
CLP1-204ENST00000529773 SYNE4Q8N205 404 aa22.05■■□□□ 1.12
CLP1-204ENST00000529773 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.05■■□□□ 1.12
CLP1-204ENST00000529773 PLA2G12BQ9BX93 195 aa22.05■■□□□ 1.12
CLP1-204ENST00000529773 NPHP1O15259 732 aa22.04■■□□□ 1.12
CLP1-204ENST00000529773 RLBP1P12271 317 aa22.04■■□□□ 1.12
CLP1-204ENST00000529773 HSP90B1P14625 803 aaKnown RBP22.04■■□□□ 1.12
CLP1-204ENST00000529773 SYT17Q9BSW7 474 aa22.04■■□□□ 1.12
CLP1-204ENST00000529773 IRS4O14654 1257 aaPredicted RBP22.03■■□□□ 1.12
CLP1-204ENST00000529773 RRP1P56182 461 aaKnown RBP22.03■■□□□ 1.12
CLP1-204ENST00000529773 PDE3AQ14432 1141 aa22.03■■□□□ 1.12
CLP1-204ENST00000529773 UBE3BQ7Z3V4 1068 aa22.03■■□□□ 1.12
CLP1-204ENST00000529773 CCDC24Q8N4L8 307 aa22.03■■□□□ 1.12
CLP1-204ENST00000529773 TMEM57Q8N5G2 664 aa22.03■■□□□ 1.12
CLP1-204ENST00000529773 CLUAP1Q96AJ1 413 aa22.03■■□□□ 1.12
CLP1-204ENST00000529773 USP44Q9H0E7 712 aa22.03■■□□□ 1.12
CLP1-204ENST00000529773 MYH3P11055 1940 aa22.02■■□□□ 1.12
CLP1-204ENST00000529773 FTSJ3Q8IY81 847 aaKnown RBP22.02■■□□□ 1.12
CLP1-204ENST00000529773 SF3B3Q15393 1217 aaKnown RBP22.01■■□□□ 1.11
CLP1-204ENST00000529773 C3orf67Q6ZVT6 689 aa22.01■■□□□ 1.11
CLP1-204ENST00000529773 NLGN2Q8NFZ4 835 aa22.01■■□□□ 1.11
CLP1-204ENST00000529773 RTL9Q8NET4 1388 aa22■■□□□ 1.11
CLP1-204ENST00000529773 PLIN1O60240 522 aa22■■□□□ 1.11
CLP1-204ENST00000529773 PDE8AO60658 829 aa22■■□□□ 1.11
CLP1-204ENST00000529773 NBPF7P0C2Y1 421 aaPredicted RBP22■■□□□ 1.11
CLP1-204ENST00000529773 SRGNP10124 158 aa22■■□□□ 1.11
CLP1-204ENST00000529773 HCLS1P14317 486 aaPredicted RBP22■■□□□ 1.11
CLP1-204ENST00000529773 KCNA3P22001 575 aa22■■□□□ 1.11
CLP1-204ENST00000529773 HOXA10P31260 410 aaPredicted RBP22■■□□□ 1.11
CLP1-204ENST00000529773 NLRP3Q96P20 1036 aa22■■□□□ 1.11
CLP1-204ENST00000529773 C9orf78Q9NZ63 289 aaPredicted RBP22■■□□□ 1.11
CLP1-204ENST00000529773 DPEP1P16444 411 aa21.99■■□□□ 1.11
CLP1-204ENST00000529773 H0YIN7 160 aa21.98■■□□□ 1.11
CLP1-204ENST00000529773 RTL5Q5HYW3 569 aaPredicted RBP21.98■■□□□ 1.11
CLP1-204ENST00000529773 STYK1Q6J9G0 422 aa21.98■■□□□ 1.11
CLP1-204ENST00000529773 C2CD5Q86YS7 1000 aa21.98■■□□□ 1.11
CLP1-204ENST00000529773 PANK1Q8TE04 598 aa21.98■■□□□ 1.11
CLP1-204ENST00000529773 KAZALD1Q96I82 304 aa21.98■■□□□ 1.11
CLP1-204ENST00000529773 NPR1P16066 1061 aa21.97■■□□□ 1.11
CLP1-204ENST00000529773 CHRNA5P30532 468 aa21.97■■□□□ 1.11
CLP1-204ENST00000529773 CTSWP56202 376 aa21.97■■□□□ 1.11
CLP1-204ENST00000529773 KLHL34Q8N239 644 aa21.97■■□□□ 1.11
CLP1-204ENST00000529773 JARID2Q92833 1246 aaPredicted RBP21.97■■□□□ 1.11
CLP1-204ENST00000529773 MASTLQ96GX5 879 aa21.97■■□□□ 1.11
CLP1-204ENST00000529773 MEIS3Q99687 375 aa21.97■■□□□ 1.11
CLP1-204ENST00000529773 MVPQ14764 893 aaKnown RBP21.96■■□□□ 1.11
CLP1-204ENST00000529773 C20orf194Q5TEA3 1177 aa21.96■■□□□ 1.11
CLP1-204ENST00000529773 A0A0G2JLW4 131 aa21.95■■□□□ 1.1
CLP1-204ENST00000529773 CSF1RP07333 972 aa21.95■■□□□ 1.1
CLP1-204ENST00000529773 GNAI3P08754 354 aa21.95■■□□□ 1.1
CLP1-204ENST00000529773 FOXO4P98177 505 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms