RNA–Protein interactions for RNA: ENST00000529736.5

CTTN-213, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-213ENST00000529736 PHACTR3Q96KR7 559 aa18.59■□□□□ 0.57
CTTN-213ENST00000529736 BABAM1Q9NWV8 329 aa18.59■□□□□ 0.57
CTTN-213ENST00000529736 H0YIN7 160 aa18.58■□□□□ 0.56
CTTN-213ENST00000529736 VAMP4O75379 141 aa18.58■□□□□ 0.56
CTTN-213ENST00000529736 SERPINB2P05120 415 aa18.58■□□□□ 0.56
CTTN-213ENST00000529736 HMOX1P09601 288 aa18.58■□□□□ 0.56
CTTN-213ENST00000529736 BCL2L12Q9HB09 334 aa18.58■□□□□ 0.56
CTTN-213ENST00000529736 ZPR1O75312 459 aa18.57■□□□□ 0.56
CTTN-213ENST00000529736 GAS2L2Q8NHY3 880 aa18.57■□□□□ 0.56
CTTN-213ENST00000529736 CHMP4AQ9BY43 222 aa18.57■□□□□ 0.56
CTTN-213ENST00000529736 ZBTB40Q9NUA8 1239 aa18.57■□□□□ 0.56
CTTN-213ENST00000529736 NOB1Q9ULX3 412 aaKnown RBP18.57■□□□□ 0.56
CTTN-213ENST00000529736 LTBP1Q14766 1721 aa18.57■□□□□ 0.56
CTTN-213ENST00000529736 L3MBTL3Q96JM7 780 aaPredicted RBP18.56■□□□□ 0.56
CTTN-213ENST00000529736 TSKSQ9UJT2 592 aa18.56■□□□□ 0.56
CTTN-213ENST00000529736 PCDHB15Q9Y5E8 787 aa18.56■□□□□ 0.56
CTTN-213ENST00000529736 TRPM7Q96QT4 1865 aa18.56■□□□□ 0.56
CTTN-213ENST00000529736 ARFGEF2Q9Y6D5 1785 aa18.55■□□□□ 0.56
CTTN-213ENST00000529736 EAPPQ56P03 285 aaPredicted RBP18.55■□□□□ 0.56
CTTN-213ENST00000529736 ITPRIPQ8IWB1 547 aa18.55■□□□□ 0.56
CTTN-213ENST00000529736 SMC5Q8IY18 1101 aa18.55■□□□□ 0.56
CTTN-213ENST00000529736 MRPL50Q8N5N7 158 aaKnown RBP18.55■□□□□ 0.56
CTTN-213ENST00000529736 BCL2L13Q9BXK5 485 aa18.55■□□□□ 0.56
CTTN-213ENST00000529736 MCOLN1Q9GZU1 580 aa18.55■□□□□ 0.56
CTTN-213ENST00000529736 MBIPQ9NS73 344 aa18.55■□□□□ 0.56
CTTN-213ENST00000529736 ABCC4O15439 1325 aa18.54■□□□□ 0.56
CTTN-213ENST00000529736 IQCA1LA6NCM1 817 aa18.54■□□□□ 0.56
CTTN-213ENST00000529736 CHL1O00533 1208 aa18.54■□□□□ 0.56
CTTN-213ENST00000529736 CABP4P57796 275 aa18.54■□□□□ 0.56
CTTN-213ENST00000529736 TWISTNBQ3B726 338 aaPredicted RBP18.54■□□□□ 0.56
CTTN-213ENST00000529736 SULT6B1Q6IMI4 303 aa18.54■□□□□ 0.56
CTTN-213ENST00000529736 ZNF622Q969S3 477 aaKnown RBP eCLIP18.54■□□□□ 0.562e-7■□□□□ 11.2
CTTN-213ENST00000529736 UPF2Q9HAU5 1272 aaKnown RBP18.54■□□□□ 0.56
CTTN-213ENST00000529736 SCN11AQ9UI33 1791 aa18.54■□□□□ 0.56
CTTN-213ENST00000529736 PTPRCP08575 1304 aa18.53■□□□□ 0.56
CTTN-213ENST00000529736 LTBP3Q9NS15 1303 aa18.53■□□□□ 0.56
CTTN-213ENST00000529736 GCC1Q96CN9 775 aa18.53■□□□□ 0.56
CTTN-213ENST00000529736 NARFQ9UHQ1 456 aa18.53■□□□□ 0.56
CTTN-213ENST00000529736 RGS3P49796 1198 aa18.52■□□□□ 0.56
CTTN-213ENST00000529736 MAP1SQ66K74 1059 aaPredicted RBP18.52■□□□□ 0.56
CTTN-213ENST00000529736 NFATC2IPQ8NCF5 419 aa18.52■□□□□ 0.56
CTTN-213ENST00000529736 TAOK3Q9H2K8 898 aa18.52■□□□□ 0.56
CTTN-213ENST00000529736 DAXXQ9UER7 740 aaPredicted RBP18.52■□□□□ 0.56
CTTN-213ENST00000529736 CLEC11AQ9Y240 323 aa18.52■□□□□ 0.56
CTTN-213ENST00000529736 DNAJC10Q8IXB1 793 aa18.51■□□□□ 0.55
CTTN-213ENST00000529736 CNTROBQ8N137 903 aa18.51■□□□□ 0.55
CTTN-213ENST00000529736 FMR1Q06787 632 aaKnown RBP eCLIP18.5■□□□□ 0.55
CTTN-213ENST00000529736 CCDC24Q8N4L8 307 aa18.5■□□□□ 0.55
CTTN-213ENST00000529736 TMEM57Q8N5G2 664 aa18.5■□□□□ 0.55
CTTN-213ENST00000529736 ABT1Q9ULW3 272 aaKnown RBP18.5■□□□□ 0.55
CTTN-213ENST00000529736 PDZRN3Q9UPQ7 1066 aa18.5■□□□□ 0.55
CTTN-213ENST00000529736 HSP90AB1P08238 724 aaKnown RBP18.49■□□□□ 0.55
CTTN-213ENST00000529736 CYP4F22Q6NT55 531 aa18.49■□□□□ 0.55
CTTN-213ENST00000529736 RTF1Q92541 710 aaKnown RBP18.49■□□□□ 0.55
CTTN-213ENST00000529736 CAPNS2Q96L46 248 aa18.49■□□□□ 0.55
CTTN-213ENST00000529736 ZNF541Q9H0D2 1346 aa18.49■□□□□ 0.55
CTTN-213ENST00000529736 COL15A1P39059 1388 aa18.48■□□□□ 0.55
CTTN-213ENST00000529736 EPHX2P34913 555 aa18.48■□□□□ 0.55
CTTN-213ENST00000529736 GPR101Q96P66 508 aaPredicted RBP18.48■□□□□ 0.55
CTTN-213ENST00000529736 CYP19A1P11511 503 aaPredicted RBP18.47■□□□□ 0.55
CTTN-213ENST00000529736 BICDL1Q6ZP65 573 aa18.47■□□□□ 0.55
CTTN-213ENST00000529736 HACL1Q9UJ83 578 aa18.47■□□□□ 0.55
CTTN-213ENST00000529736 LAS1LQ9Y4W2 734 aaKnown RBP18.47■□□□□ 0.55
CTTN-213ENST00000529736 ZBTB7BO15156 539 aaPredicted RBP18.46■□□□□ 0.55
CTTN-213ENST00000529736 GRM1Q13255 1194 aa18.46■□□□□ 0.55
CTTN-213ENST00000529736 INTS3Q68E01 1043 aaKnown RBP18.46■□□□□ 0.55
CTTN-213ENST00000529736 ZNF530Q6P9A1 599 aaPredicted RBP18.46■□□□□ 0.55
CTTN-213ENST00000529736 BEGAINQ9BUH8 593 aa18.46■□□□□ 0.55
CTTN-213ENST00000529736 DDX21Q9NR30 783 aaKnown RBP eCLIP18.46■□□□□ 0.55
CTTN-213ENST00000529736 ZBTB1Q9Y2K1 713 aa18.46■□□□□ 0.55
CTTN-213ENST00000529736 CACNA1FO60840 1977 aa18.46■□□□□ 0.55
CTTN-213ENST00000529736 AOC2O75106 756 aa18.45■□□□□ 0.54
CTTN-213ENST00000529736 BECN1Q14457 450 aa18.45■□□□□ 0.54
CTTN-213ENST00000529736 NPM2Q86SE8 214 aaKnown RBP18.45■□□□□ 0.54
CTTN-213ENST00000529736 BRIP1Q9BX63 1249 aa18.45■□□□□ 0.54
CTTN-213ENST00000529736 NUCB1Q02818 461 aa18.44■□□□□ 0.54
CTTN-213ENST00000529736 PLEKHO1Q53GL0 409 aaPredicted RBP18.44■□□□□ 0.54
CTTN-213ENST00000529736 PDE6BP35913 854 aa18.43■□□□□ 0.54
CTTN-213ENST00000529736 DGKZQ13574 1117 aa18.43■□□□□ 0.54
CTTN-213ENST00000529736 TBC1D9BQ66K14 1250 aa18.43■□□□□ 0.54
CTTN-213ENST00000529736 PRR5LQ6MZQ0 368 aa18.43■□□□□ 0.54
CTTN-213ENST00000529736 PAXIP1Q6ZW49 1069 aaPredicted RBP18.43■□□□□ 0.54
CTTN-213ENST00000529736 TNNQ9UQP3 1299 aa18.43■□□□□ 0.54
CTTN-213ENST00000529736 CST9Q5W186 159 aa18.42■□□□□ 0.54
CTTN-213ENST00000529736 PRPF40BQ6NWY9 871 aaKnown RBP18.42■□□□□ 0.54
CTTN-213ENST00000529736 AEBP1Q8IUX7 1158 aa18.42■□□□□ 0.54
CTTN-213ENST00000529736 C8orf58Q8NAV2 365 aa18.42■□□□□ 0.54
CTTN-213ENST00000529736 C7orf43Q8WVR3 580 aa18.42■□□□□ 0.54
CTTN-213ENST00000529736 ECE1P42892 770 aa18.41■□□□□ 0.54
CTTN-213ENST00000529736 RTL5Q5HYW3 569 aaPredicted RBP18.41■□□□□ 0.54
CTTN-213ENST00000529736 PNMA8AQ86V59 439 aaPredicted RBP18.41■□□□□ 0.54
CTTN-213ENST00000529736 SCN7AQ01118 1682 aa18.41■□□□□ 0.54
CTTN-213ENST00000529736 GNAT3A8MTJ3 354 aa18.4■□□□□ 0.54
CTTN-213ENST00000529736 RPAP2Q8IXW5 612 aaPredicted RBP18.4■□□□□ 0.54
CTTN-213ENST00000529736 TSPYL6Q8N831 410 aa18.4■□□□□ 0.54
CTTN-213ENST00000529736 THUMPD2Q9BTF0 503 aaKnown RBP18.4■□□□□ 0.54
CTTN-213ENST00000529736 SOX10P56693 466 aa18.39■□□□□ 0.53
CTTN-213ENST00000529736 SLC39A6Q13433 755 aa18.39■□□□□ 0.53
CTTN-213ENST00000529736 AMOTQ4VCS5 1084 aa18.39■□□□□ 0.53
CTTN-213ENST00000529736 PRPF38BQ5VTL8 546 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms