RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 ATP2B3Q16720 1220 aa5.53□□□□□ -1.52
CASP4-207ENST00000529565 TSR1Q2NL82 804 aaKnown RBP5.53□□□□□ -1.52
CASP4-207ENST00000529565 TPTE2Q6XPS3 522 aa5.53□□□□□ -1.52
CASP4-207ENST00000529565 DZIP1Q86YF9 867 aaKnown RBP5.53□□□□□ -1.52
CASP4-207ENST00000529565 CARD10Q9BWT7 1032 aa5.53□□□□□ -1.52
CASP4-207ENST00000529565 NAT10Q9H0A0 1025 aaKnown RBP5.53□□□□□ -1.52
CASP4-207ENST00000529565 NIP7Q9Y221 180 aaKnown RBP eCLIP5.53□□□□□ -1.52
CASP4-207ENST00000529565 PTCH1Q13635 1447 aa5.53□□□□□ -1.52
CASP4-207ENST00000529565 CDC42BPGQ6DT37 1551 aa5.53□□□□□ -1.52
CASP4-207ENST00000529565 CCDC196A0A1B0GTZ2 297 aa5.53□□□□□ -1.52
CASP4-207ENST00000529565 TRMT2AQ8IZ69 625 aaKnown RBP5.53□□□□□ -1.52
CASP4-207ENST00000529565 NEURL4Q96JN8 1562 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 TRAK2O60296 914 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 FOSBP53539 338 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 ANAPC15P60006 121 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 IKQ13123 557 aaPredicted RBP5.52□□□□□ -1.53
CASP4-207ENST00000529565 STK38Q15208 465 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 DDX17Q92841 729 aaKnown RBP5.52□□□□□ -1.53
CASP4-207ENST00000529565 BCL11BQ9C0K0 894 aaPredicted RBP5.52□□□□□ -1.53
CASP4-207ENST00000529565 PHAXQ9H814 394 aaKnown RBP5.52□□□□□ -1.53
CASP4-207ENST00000529565 GOLIM4O00461 696 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 ZNF213O14771 459 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 KINO60870 393 aaKnown RBP5.52□□□□□ -1.53
CASP4-207ENST00000529565 TXLNAP40222 546 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 RBM5P52756 815 aaKnown RBP eCLIP5.52□□□□□ -1.53
CASP4-207ENST00000529565 ZGPATQ8N5A5 531 aaKnown RBP5.52□□□□□ -1.53
CASP4-207ENST00000529565 IL17REQ8NFR9 667 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 TBC1D32Q96NH3 1257 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 SDF4Q9BRK5 362 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 CFAP45Q9UL16 551 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 ZBTB12Q9Y330 459 aaPredicted RBP5.52□□□□□ -1.53
CASP4-207ENST00000529565 KIAA1210Q9ULL0 1709 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 NEXMIFQ5QGS0 1516 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 SDSP20132 328 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 USP5P45974 858 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 CWF19L2Q2TBE0 894 aaKnown RBP5.52□□□□□ -1.53
CASP4-207ENST00000529565 G2E3Q7L622 706 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 PPP1R1BQ9UD71 204 aaPredicted RBP5.52□□□□□ -1.53
CASP4-207ENST00000529565 NOL7Q9UMY1 257 aaKnown RBP5.52□□□□□ -1.53
CASP4-207ENST00000529565 LIMCH1Q9UPQ0 1083 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 QRICH2Q9H0J4 1663 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 IRS4O14654 1257 aaPredicted RBP5.52□□□□□ -1.53
CASP4-207ENST00000529565 GSTO1P78417 241 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 HMGN5P82970 282 aaKnown RBP5.52□□□□□ -1.53
CASP4-207ENST00000529565 STK3Q13188 491 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 TNNQ9UQP3 1299 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 AOX1Q06278 1338 aa5.52□□□□□ -1.53
CASP4-207ENST00000529565 BAG3O95817 575 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 MRE11P49959 708 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 SOGA3Q5TF21 947 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 USP19O94966 1318 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 WDR17Q8IZU2 1322 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 ZNF521Q96K83 1311 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 USP31Q70CQ4 1352 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 GIGYF1O75420 1035 aaPredicted RBP5.51□□□□□ -1.53
CASP4-207ENST00000529565 OLFM4Q6UX06 510 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 IQCA1Q86XH1 822 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 CREBRFQ8IUR6 639 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 NUP133Q8WUM0 1156 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 ZNF496Q96IT1 587 aaPredicted RBP5.51□□□□□ -1.53
CASP4-207ENST00000529565 CCDC43Q96MW1 224 aaKnown RBP5.51□□□□□ -1.53
CASP4-207ENST00000529565 CCDC87Q9NVE4 849 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 ABCC4O15439 1325 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 RAD50Q92878 1312 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 C6orf229H3BNL8 230 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 PRPF40AO75400 957 aaKnown RBP5.51□□□□□ -1.53
CASP4-207ENST00000529565 POLR3DP05423 398 aaPredicted RBP5.51□□□□□ -1.53
CASP4-207ENST00000529565 ANKRD2Q9GZV1 360 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 ERBB3P21860 1342 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 BCORL1Q5H9F3 1711 aa5.51□□□□□ -1.53
CASP4-207ENST00000529565 FIBPO43427 364 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 VASPP50552 380 aaPredicted RBP5.5□□□□□ -1.53
CASP4-207ENST00000529565 SPATA31A3Q5VYP0 1347 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 ZSCAN29Q8IWY8 852 aaPredicted RBP5.5□□□□□ -1.53
CASP4-207ENST00000529565 VWDEQ8N2E2 1590 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 ESYT1Q9BSJ8 1104 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 USP21Q9UK80 565 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 NRXN1Q9ULB1 1477 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 SH3TC1Q8TE82 1336 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 PES1O00541 588 aaKnown RBP5.5□□□□□ -1.53
CASP4-207ENST00000529565 JARID2Q92833 1246 aaPredicted RBP5.5□□□□□ -1.53
CASP4-207ENST00000529565 UPF3BQ9BZI7 483 aaKnown RBP5.5□□□□□ -1.53
CASP4-207ENST00000529565 BICC1Q9H694 974 aaKnown RBP5.5□□□□□ -1.53
CASP4-207ENST00000529565 MTMR7Q9Y216 660 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 PRIM1P49642 420 aaKnown RBP5.5□□□□□ -1.53
CASP4-207ENST00000529565 TRAPPC3LQ5T215 181 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 PLEKHM2Q8IWE5 1019 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 MKNK2Q9HBH9 465 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 CCNL1Q9UK58 526 aaPredicted RBP5.5□□□□□ -1.53
CASP4-207ENST00000529565 PIK3C2BO00750 1634 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 NCAPD2Q15021 1401 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 MINDY4BA8MYZ0 360 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 EYA2O00167 538 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 PIP4K2AP48426 406 aaPredicted RBP5.5□□□□□ -1.53
CASP4-207ENST00000529565 MCMDC2Q4G0Z9 681 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 CRNKL1Q9BZJ0 848 aaKnown RBP5.5□□□□□ -1.53
CASP4-207ENST00000529565 FRMPD1Q5SYB0 1578 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 SPATA31D1Q6ZQQ2 1576 aa5.5□□□□□ -1.53
CASP4-207ENST00000529565 ZNF335Q9H4Z2 1342 aaPredicted RBP5.49□□□□□ -1.53
CASP4-207ENST00000529565 DEPDC5O75140 1603 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms