RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 ERFEQ4G0M1 354 aa15.67■□□□□ 0.1
COPB1-206ENST00000529210 NUTM1Q86Y26 1132 aa15.67■□□□□ 0.1
COPB1-206ENST00000529210 CHPF2Q9P2E5 772 aa15.67■□□□□ 0.1
COPB1-206ENST00000529210 FAM177BA6PVY3 158 aa15.66■□□□□ 0.1
COPB1-206ENST00000529210 TOMM70O94826 608 aa15.66■□□□□ 0.1
COPB1-206ENST00000529210 TCIRG1Q13488 830 aa15.66■□□□□ 0.1
COPB1-206ENST00000529210 CCDC93Q567U6 631 aa15.66■□□□□ 0.1
COPB1-206ENST00000529210 CHMP4AQ9BY43 222 aa15.66■□□□□ 0.1
COPB1-206ENST00000529210 TAOK3Q9H2K8 898 aa15.66■□□□□ 0.1
COPB1-206ENST00000529210 NMRK2Q9NPI5 230 aa15.66■□□□□ 0.1
COPB1-206ENST00000529210 HYPKQ9NX55 129 aa15.66■□□□□ 0.1
COPB1-206ENST00000529210 GLTPD2A6NH11 291 aa15.65■□□□□ 0.1
COPB1-206ENST00000529210 NLRP10Q86W26 655 aa15.65■□□□□ 0.1
COPB1-206ENST00000529210 PLBD2Q8NHP8 589 aa15.65■□□□□ 0.1
COPB1-206ENST00000529210 NECTIN2Q92692 538 aa15.65■□□□□ 0.1
COPB1-206ENST00000529210 IL16Q14005 1332 aa15.65■□□□□ 0.1
COPB1-206ENST00000529210 CC2D2BQ6DHV5 1058 aa15.64■□□□□ 0.09
COPB1-206ENST00000529210 RTKN2Q8IZC4 609 aa15.64■□□□□ 0.09
COPB1-206ENST00000529210 WDR90Q96KV7 1748 aa15.64■□□□□ 0.09
COPB1-206ENST00000529210 CRAMP1Q96RY5 1269 aa15.64■□□□□ 0.09
COPB1-206ENST00000529210 UTP14AQ9BVJ6 771 aaKnown RBP15.64■□□□□ 0.09
COPB1-206ENST00000529210 MRS2Q9HD23 443 aa15.64■□□□□ 0.09
COPB1-206ENST00000529210 SENP3-EIF4A1A0A087X0R7 540 aa15.63■□□□□ 0.09
COPB1-206ENST00000529210 FKBP4Q02790 459 aaKnown RBP eCLIP15.63■□□□□ 0.09
COPB1-206ENST00000529210 AIMP1Q12904 312 aaKnown RBP15.63■□□□□ 0.09
COPB1-206ENST00000529210 TRIM28Q13263 835 aaKnown RBP15.63■□□□□ 0.09
COPB1-206ENST00000529210 GRIPAP1Q4V328 841 aa15.63■□□□□ 0.09
COPB1-206ENST00000529210 ANKRD13DQ6ZTN6 518 aa15.63■□□□□ 0.09
COPB1-206ENST00000529210 WWC1Q8IX03 1113 aa15.63■□□□□ 0.09
COPB1-206ENST00000529210 RBM46Q8TBY0 533 aaKnown RBP15.63■□□□□ 0.09
COPB1-206ENST00000529210 ISCA1Q9BUE6 129 aa15.63■□□□□ 0.09
COPB1-206ENST00000529210 CEP350Q5VT06 3117 aa15.63■□□□□ 0.09
COPB1-206ENST00000529210 LAMB2P55268 1798 aa15.62■□□□□ 0.09
COPB1-206ENST00000529210 HSPA6P17066 643 aa15.62■□□□□ 0.09
COPB1-206ENST00000529210 NLRP3Q96P20 1036 aa15.62■□□□□ 0.09
COPB1-206ENST00000529210 PSMD1Q99460 953 aa15.62■□□□□ 0.09
COPB1-206ENST00000529210 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
COPB1-206ENST00000529210 C8orf58Q8NAV2 365 aa15.61■□□□□ 0.09
COPB1-206ENST00000529210 RPGRQ92834 1020 aaKnown RBP15.61■□□□□ 0.09
COPB1-206ENST00000529210 RBM17Q96I25 401 aaKnown RBP15.61■□□□□ 0.09
COPB1-206ENST00000529210 DPY19L2Q6NUT2 758 aa15.6■□□□□ 0.09
COPB1-206ENST00000529210 RRAGCQ9HB90 399 aa15.6■□□□□ 0.09
COPB1-206ENST00000529210 SH3TC1Q8TE82 1336 aa15.6■□□□□ 0.09
COPB1-206ENST00000529210 DDX60Q8IY21 1712 aaKnown RBP15.6■□□□□ 0.09
COPB1-206ENST00000529210 VEGFAP15692 232 aaPredicted RBP15.59■□□□□ 0.09
COPB1-206ENST00000529210 FSTL1Q12841 308 aa15.59■□□□□ 0.09
COPB1-206ENST00000529210 CCDC30Q5VVM6 783 aa15.59■□□□□ 0.09
COPB1-206ENST00000529210 C3orf67Q6ZVT6 689 aa15.59■□□□□ 0.09
COPB1-206ENST00000529210 POTECB2RU33 542 aa15.58■□□□□ 0.08
COPB1-206ENST00000529210 WDR63Q8IWG1 891 aa15.58■□□□□ 0.08
COPB1-206ENST00000529210 TRMT112Q9UI30 125 aaKnown RBP15.58■□□□□ 0.08
COPB1-206ENST00000529210 OLFM4Q6UX06 510 aa15.57■□□□□ 0.08
COPB1-206ENST00000529210 C16orf71Q8IYS4 520 aaPredicted RBP15.57■□□□□ 0.08
COPB1-206ENST00000529210 TSPYL6Q8N831 410 aa15.57■□□□□ 0.08
COPB1-206ENST00000529210 PHAXQ9H814 394 aaKnown RBP15.57■□□□□ 0.08
COPB1-206ENST00000529210 CACNA1FO60840 1977 aa15.56■□□□□ 0.08
COPB1-206ENST00000529210 ELL2O00472 640 aaPredicted RBP15.56■□□□□ 0.08
COPB1-206ENST00000529210 BBOX1O75936 387 aa15.56■□□□□ 0.08
COPB1-206ENST00000529210 IARSP41252 1262 aaKnown RBP15.56■□□□□ 0.08
COPB1-206ENST00000529210 GOLGA2Q08379 1002 aa15.56■□□□□ 0.08
COPB1-206ENST00000529210 SYNE4Q8N205 404 aa15.56■□□□□ 0.08
COPB1-206ENST00000529210 TSR2Q969E8 191 aaKnown RBP15.56■□□□□ 0.08
COPB1-206ENST00000529210 L3MBTL3Q96JM7 780 aaPredicted RBP15.56■□□□□ 0.08
COPB1-206ENST00000529210 VPS33BQ9H267 617 aa15.56■□□□□ 0.08
COPB1-206ENST00000529210 ATP6V0A2Q9Y487 856 aa15.56■□□□□ 0.08
COPB1-206ENST00000529210 ABCC4O15439 1325 aa15.56■□□□□ 0.08
COPB1-206ENST00000529210 SCN4AP35499 1836 aa15.56■□□□□ 0.08
COPB1-206ENST00000529210 LRRC37AA6NMS7 1700 aa15.55■□□□□ 0.08
COPB1-206ENST00000529210 FZD9O00144 591 aa15.55■□□□□ 0.08
COPB1-206ENST00000529210 PPEF1O14829 653 aaPredicted RBP15.55■□□□□ 0.08
COPB1-206ENST00000529210 HCLS1P14317 486 aaPredicted RBP15.55■□□□□ 0.08
COPB1-206ENST00000529210 APLP1P51693 650 aa15.55■□□□□ 0.08
COPB1-206ENST00000529210 SF3B3Q15393 1217 aaKnown RBP15.55■□□□□ 0.08
COPB1-206ENST00000529210 TMC4Q7Z404 712 aa15.55■□□□□ 0.08
COPB1-206ENST00000529210 RIC3Q7Z5B4 369 aa15.55■□□□□ 0.08
COPB1-206ENST00000529210 ZNF277Q9NRM2 450 aaPredicted RBP15.55■□□□□ 0.08
COPB1-206ENST00000529210 DDX58O95786 925 aaKnown RBP15.54■□□□□ 0.08
COPB1-206ENST00000529210 CCDC191Q8NCU4 936 aa15.54■□□□□ 0.08
COPB1-206ENST00000529210 SMC1BQ8NDV3 1235 aa15.54■□□□□ 0.08
COPB1-206ENST00000529210 RTFDC1Q9BY42 306 aaPredicted RBP15.54■□□□□ 0.08
COPB1-206ENST00000529210 FANCIQ9NVI1 1328 aa15.53■□□□□ 0.08
COPB1-206ENST00000529210 ATP5J2-PTCD1G3V325 749 aa15.53■□□□□ 0.08
COPB1-206ENST00000529210 HSP90B1P14625 803 aaKnown RBP15.53■□□□□ 0.08
COPB1-206ENST00000529210 GRAPQ13588 217 aa15.53■□□□□ 0.08
COPB1-206ENST00000529210 TWISTNBQ3B726 338 aaPredicted RBP15.53■□□□□ 0.08
COPB1-206ENST00000529210 DDX46Q7L014 1031 aaKnown RBP15.53■□□□□ 0.08
COPB1-206ENST00000529210 SP8Q8IXZ3 490 aa15.53■□□□□ 0.08
COPB1-206ENST00000529210 ZBTB38Q8NAP3 1195 aaPredicted RBP15.53■□□□□ 0.08
COPB1-206ENST00000529210 GRAPLQ8TC17 118 aaPredicted RBP15.53■□□□□ 0.08
COPB1-206ENST00000529210 METTL22Q9BUU2 404 aaPredicted RBP15.53■□□□□ 0.08
COPB1-206ENST00000529210 COL4A5P29400 1685 aa15.52■□□□□ 0.08
COPB1-206ENST00000529210 DDNO94850 711 aaPredicted RBP15.52■□□□□ 0.08
COPB1-206ENST00000529210 KSR2Q6VAB6 950 aa15.52■□□□□ 0.08
COPB1-206ENST00000529210 FAM89AQ96GI7 184 aa15.52■□□□□ 0.08
COPB1-206ENST00000529210 STK31Q9BXU1 1019 aa15.52■□□□□ 0.08
COPB1-206ENST00000529210 IQCA1LA6NCM1 817 aa15.51■□□□□ 0.07
COPB1-206ENST00000529210 PCCAP05165 728 aaPredicted RBP15.51■□□□□ 0.07
COPB1-206ENST00000529210 JDP2Q8WYK2 163 aa15.51■□□□□ 0.07
COPB1-206ENST00000529210 ZNF521Q96K83 1311 aa15.5■□□□□ 0.07
COPB1-206ENST00000529210 ZNF541Q9H0D2 1346 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms