RNA–Protein interactions for RNA: ENST00000528748.5

CDC27-206, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-206ENST00000528748 PRAMEF22A3QJZ6 481 aa14.2□□□□□ -0.14
CDC27-206ENST00000528748 CYP19A1P11511 503 aaPredicted RBP14.2□□□□□ -0.14
CDC27-206ENST00000528748 KRT24Q2M2I5 525 aa14.2□□□□□ -0.14
CDC27-206ENST00000528748 RC3H1Q5TC82 1133 aaKnown RBP14.2□□□□□ -0.14
CDC27-206ENST00000528748 TRMT2AQ8IZ69 625 aaKnown RBP14.2□□□□□ -0.14
CDC27-206ENST00000528748 LINC00116Q8NCU8 138 aa14.2□□□□□ -0.14
CDC27-206ENST00000528748 ARIH1Q9Y4X5 557 aaPredicted RBP14.2□□□□□ -0.14
CDC27-206ENST00000528748 FANCIQ9NVI1 1328 aa14.19□□□□□ -0.14
CDC27-206ENST00000528748 SPDYE16A6NNV3 312 aaPredicted RBP14.19□□□□□ -0.14
CDC27-206ENST00000528748 STARD3NLO95772 234 aa14.19□□□□□ -0.14
CDC27-206ENST00000528748 PDIA6Q15084 440 aa14.19□□□□□ -0.14
CDC27-206ENST00000528748 NBPF14Q5TI25 921 aa14.19□□□□□ -0.14
CDC27-206ENST00000528748 C8orf58Q8NAV2 365 aa14.19□□□□□ -0.14
CDC27-206ENST00000528748 TAF1LQ8IZX4 1826 aa14.18□□□□□ -0.14
CDC27-206ENST00000528748 RREB1Q92766 1687 aa14.18□□□□□ -0.14
CDC27-206ENST00000528748 PHF14O94880 888 aa14.18□□□□□ -0.14
CDC27-206ENST00000528748 DUSP27Q5VZP5 1158 aa14.18□□□□□ -0.14
CDC27-206ENST00000528748 INTS5Q6P9B9 1019 aaKnown RBP14.18□□□□□ -0.14
CDC27-206ENST00000528748 KCNK17Q96T54 332 aa14.18□□□□□ -0.14
CDC27-206ENST00000528748 ELL2O00472 640 aaPredicted RBP14.17□□□□□ -0.14
CDC27-206ENST00000528748 A1BGP04217 495 aa14.17□□□□□ -0.14
CDC27-206ENST00000528748 HOXB7P09629 217 aa14.17□□□□□ -0.14
CDC27-206ENST00000528748 CRKLP46109 303 aaKnown RBP14.17□□□□□ -0.14
CDC27-206ENST00000528748 PSEN2P49810 448 aa14.17□□□□□ -0.14
CDC27-206ENST00000528748 EXOSC9Q06265 439 aaKnown RBP14.17□□□□□ -0.14
CDC27-206ENST00000528748 TSPYL6Q8N831 410 aa14.17□□□□□ -0.14
CDC27-206ENST00000528748 FBXW7Q969H0 707 aa14.17□□□□□ -0.14
CDC27-206ENST00000528748 CNTNAP4Q9C0A0 1308 aa14.16□□□□□ -0.14
CDC27-206ENST00000528748 TJP1Q07157 1748 aa14.16□□□□□ -0.14
CDC27-206ENST00000528748 PTPREP23469 700 aa14.16□□□□□ -0.14
CDC27-206ENST00000528748 SLC15A2Q16348 729 aa14.16□□□□□ -0.14
CDC27-206ENST00000528748 STK32BQ9NY57 414 aa14.16□□□□□ -0.14
CDC27-206ENST00000528748 PCDHGA10Q9Y5H3 936 aa14.16□□□□□ -0.14
CDC27-206ENST00000528748 MYH14Q7Z406 1995 aaKnown RBP14.16□□□□□ -0.14
CDC27-206ENST00000528748 SOS1Q07889 1333 aaPredicted RBP14.15□□□□□ -0.14
CDC27-206ENST00000528748 CICQ96RK0 1608 aaPredicted RBP14.15□□□□□ -0.14
CDC27-206ENST00000528748 NUP188Q5SRE5 1749 aa14.15□□□□□ -0.14
CDC27-206ENST00000528748 C5P01031 1676 aa14.15□□□□□ -0.14
CDC27-206ENST00000528748 VAMP4O75379 141 aa14.15□□□□□ -0.14
CDC27-206ENST00000528748 RPS6KA4O75676 772 aa14.15□□□□□ -0.14
CDC27-206ENST00000528748 EIF2S2P20042 333 aaKnown RBP14.15□□□□□ -0.14
CDC27-206ENST00000528748 ZNF827Q17R98 1081 aa14.15□□□□□ -0.14
CDC27-206ENST00000528748 TYW1BQ6NUM6 668 aa14.15□□□□□ -0.14
CDC27-206ENST00000528748 YTHDC1Q96MU7 727 aaKnown RBP14.15□□□□□ -0.14
CDC27-206ENST00000528748 CCDC87Q9NVE4 849 aa14.15□□□□□ -0.14
CDC27-206ENST00000528748 TK2O00142 265 aa14.14□□□□□ -0.15
CDC27-206ENST00000528748 TWISTNBQ3B726 338 aaPredicted RBP14.14□□□□□ -0.15
CDC27-206ENST00000528748 ADGRD1Q6QNK2 874 aa14.14□□□□□ -0.15
CDC27-206ENST00000528748 AK7Q96M32 723 aa14.14□□□□□ -0.15
CDC27-206ENST00000528748 EPAS1Q99814 870 aa14.14□□□□□ -0.15
CDC27-206ENST00000528748 TFCP2L1Q9NZI6 479 aa14.14□□□□□ -0.15
CDC27-206ENST00000528748 COL5A3P25940 1745 aaPredicted RBP14.14□□□□□ -0.15
CDC27-206ENST00000528748 C4BP0C0L5 1744 aa14.13□□□□□ -0.15
CDC27-206ENST00000528748 NBPF26B4DH59 902 aa14.13□□□□□ -0.15
CDC27-206ENST00000528748 GNPATO15228 680 aa14.13□□□□□ -0.15
CDC27-206ENST00000528748 CANXP27824 592 aaKnown RBP14.13□□□□□ -0.15
CDC27-206ENST00000528748 DMRTA1Q5VZB9 504 aa14.13□□□□□ -0.15
CDC27-206ENST00000528748 NBPF10Q6P3W6 841 aaKnown RBP14.13□□□□□ -0.15
CDC27-206ENST00000528748 NBPF15Q8N660 670 aa14.13□□□□□ -0.15
CDC27-206ENST00000528748 NECTIN2Q92692 538 aa14.13□□□□□ -0.15
CDC27-206ENST00000528748 CHMP4AQ9BY43 222 aa14.13□□□□□ -0.15
CDC27-206ENST00000528748 ADAM33Q9BZ11 813 aa14.13□□□□□ -0.15
CDC27-206ENST00000528748 ZBTB1Q9Y2K1 713 aa14.13□□□□□ -0.15
CDC27-206ENST00000528748 RTCBQ9Y3I0 505 aaKnown RBP14.13□□□□□ -0.15
CDC27-206ENST00000528748 EIF5P55010 431 aaKnown RBP14.12□□□□□ -0.15
CDC27-206ENST00000528748 HDGFL1Q5TGJ6 251 aa14.12□□□□□ -0.15
CDC27-206ENST00000528748 SMIM5Q71RC9 77 aa14.12□□□□□ -0.15
CDC27-206ENST00000528748 AMIGO3Q86WK7 504 aa14.12□□□□□ -0.15
CDC27-206ENST00000528748 ERBB4Q15303 1308 aa14.12□□□□□ -0.15
CDC27-206ENST00000528748 IL6STP40189 918 aaPredicted RBP14.11□□□□□ -0.15
CDC27-206ENST00000528748 PIP4K2AP48426 406 aaPredicted RBP14.11□□□□□ -0.15
CDC27-206ENST00000528748 TRAPPC3LQ5T215 181 aa14.11□□□□□ -0.15
CDC27-206ENST00000528748 CCDC30Q5VVM6 783 aa14.11□□□□□ -0.15
CDC27-206ENST00000528748 FLAD1Q8NFF5 587 aa14.11□□□□□ -0.15
CDC27-206ENST00000528748 DDX21Q9NR30 783 aaKnown RBP eCLIP14.11□□□□□ -0.15
CDC27-206ENST00000528748 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.1□□□□□ -0.15
CDC27-206ENST00000528748 SSFA2P28290 1259 aa14.1□□□□□ -0.15
CDC27-206ENST00000528748 R3HDM1Q15032 1099 aaKnown RBP14.1□□□□□ -0.15
CDC27-206ENST00000528748 COL23A1Q86Y22 540 aaPredicted RBP14.1□□□□□ -0.15
CDC27-206ENST00000528748 ARHGEF1Q92888 912 aaKnown RBP14.1□□□□□ -0.15
CDC27-206ENST00000528748 DBF4Q9UBU7 674 aaPredicted RBP14.1□□□□□ -0.15
CDC27-206ENST00000528748 LAMB4A4D0S4 1761 aa14.09□□□□□ -0.15
CDC27-206ENST00000528748 CT47B1P0C2W7 299 aaPredicted RBP14.09□□□□□ -0.15
CDC27-206ENST00000528748 MYL6BP14649 208 aa14.09□□□□□ -0.15
CDC27-206ENST00000528748 LRP10Q7Z4F1 713 aa14.09□□□□□ -0.15
CDC27-206ENST00000528748 DDX12PQ92771 950 aa14.09□□□□□ -0.15
CDC27-206ENST00000528748 RNF166Q96A37 237 aaPredicted RBP14.09□□□□□ -0.15
CDC27-206ENST00000528748 CHPF2Q9P2E5 772 aa14.09□□□□□ -0.15
CDC27-206ENST00000528748 UBR3Q6ZT12 1888 aa14.09□□□□□ -0.15
CDC27-206ENST00000528748 PNPLA7Q6ZV29 1317 aa14.09□□□□□ -0.15
CDC27-206ENST00000528748 A0A087WZG4 1122 aa14.08□□□□□ -0.16
CDC27-206ENST00000528748 TCERG1O14776 1098 aaKnown RBP14.08□□□□□ -0.16
CDC27-206ENST00000528748 ANXA1P04083 346 aa14.08□□□□□ -0.16
CDC27-206ENST00000528748 PROSER3Q2NL68 480 aa14.08□□□□□ -0.16
CDC27-206ENST00000528748 NPM2Q86SE8 214 aaKnown RBP14.08□□□□□ -0.16
CDC27-206ENST00000528748 RFC4P35249 363 aa14.07□□□□□ -0.16
CDC27-206ENST00000528748 ZNF428Q96B54 188 aa14.07□□□□□ -0.16
CDC27-206ENST00000528748 PDGFDQ9GZP0 370 aaPredicted RBP14.07□□□□□ -0.16
CDC27-206ENST00000528748 HYPKQ9NX55 129 aa14.07□□□□□ -0.16
CDC27-206ENST00000528748 ZNF330Q9Y3S2 320 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms