RNA–Protein interactions for RNA: ENST00000528593.1

CKAP5-209, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 2

Gene CKAP5, Length 366 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-209ENST00000528593 PANK3Q9H999 370 aa8.01□□□□□ -1.13
CKAP5-209ENST00000528593 NXF1Q9UBU9 619 aaKnown RBP8.01□□□□□ -1.13
CKAP5-209ENST00000528593 XRN1Q8IZH2 1706 aaKnown RBP8□□□□□ -1.13
CKAP5-209ENST00000528593 ERVH48-1M5A8F1 160 aa8□□□□□ -1.13
CKAP5-209ENST00000528593 SPINT1O43278 529 aa8□□□□□ -1.13
CKAP5-209ENST00000528593 LILRA1O75019 489 aa8□□□□□ -1.13
CKAP5-209ENST00000528593 UPP2O95045 317 aa8□□□□□ -1.13
CKAP5-209ENST00000528593 BMP2P12643 396 aa8□□□□□ -1.13
CKAP5-209ENST00000528593 CNGB1Q14028 1251 aaPredicted RBP8□□□□□ -1.13
CKAP5-209ENST00000528593 C6orf118Q5T5N4 469 aa8□□□□□ -1.13
CKAP5-209ENST00000528593 ZNF784Q8NCA9 323 aaPredicted RBP8□□□□□ -1.13
CKAP5-209ENST00000528593 TMC1Q8TDI8 760 aa8□□□□□ -1.13
CKAP5-209ENST00000528593 PUS7Q96PZ0 661 aaKnown RBP8□□□□□ -1.13
CKAP5-209ENST00000528593 WASLO00401 505 aaPredicted RBP7.99□□□□□ -1.13
CKAP5-209ENST00000528593 WIPF1O43516 503 aa7.99□□□□□ -1.13
CKAP5-209ENST00000528593 MCCD1P59942 119 aaPredicted RBP7.99□□□□□ -1.13
CKAP5-209ENST00000528593 CCDC125Q86Z20 511 aa7.99□□□□□ -1.13
CKAP5-209ENST00000528593 SLC12A5Q9H2X9 1139 aa7.99□□□□□ -1.13
CKAP5-209ENST00000528593 ATAD2Q6PL18 1390 aa7.98□□□□□ -1.13
CKAP5-209ENST00000528593 H3BM21 787 aa7.98□□□□□ -1.13
CKAP5-209ENST00000528593 ZNF592Q92610 1267 aa7.98□□□□□ -1.13
CKAP5-209ENST00000528593 TMPRSS4Q9NRS4 437 aa7.98□□□□□ -1.13
CKAP5-209ENST00000528593 DNMT3LQ9UJW3 386 aa7.98□□□□□ -1.13
CKAP5-209ENST00000528593 TBC1D2BQ9UPU7 963 aa7.98□□□□□ -1.13
CKAP5-209ENST00000528593 PCDHB9Q9Y5E1 797 aa7.98□□□□□ -1.13
CKAP5-209ENST00000528593 MYOM1P52179 1685 aa7.98□□□□□ -1.13
CKAP5-209ENST00000528593 SOBPA7XYQ1 873 aa7.97□□□□□ -1.13
CKAP5-209ENST00000528593 ADH1AP07327 375 aa7.97□□□□□ -1.13
CKAP5-209ENST00000528593 KDF1Q8NAX2 398 aaPredicted RBP7.97□□□□□ -1.13
CKAP5-209ENST00000528593 PRKRIP1Q9H875 184 aaPredicted RBP7.97□□□□□ -1.13
CKAP5-209ENST00000528593 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.97□□□□□ -1.13
CKAP5-209ENST00000528593 ADGRB2O60241 1585 aa7.97□□□□□ -1.13
CKAP5-209ENST00000528593 NWD1Q149M9 1564 aa7.97□□□□□ -1.13
CKAP5-209ENST00000528593 GIGYF1O75420 1035 aaPredicted RBP7.96□□□□□ -1.14
CKAP5-209ENST00000528593 ADD1P35611 737 aaKnown RBP7.96□□□□□ -1.14
CKAP5-209ENST00000528593 IRF5Q13568 498 aa7.96□□□□□ -1.14
CKAP5-209ENST00000528593 MCM6Q14566 821 aa7.96□□□□□ -1.14
CKAP5-209ENST00000528593 NUDT16Q96DE0 195 aaKnown RBP7.96□□□□□ -1.14
CKAP5-209ENST00000528593 CABP1Q9NZU7 370 aa7.96□□□□□ -1.14
CKAP5-209ENST00000528593 KNSTRNQ9Y448 316 aa7.96□□□□□ -1.14
CKAP5-209ENST00000528593 PRR36Q9H6K5 1346 aa7.96□□□□□ -1.14
CKAP5-209ENST00000528593 KTN1Q86UP2 1357 aaKnown RBP7.96□□□□□ -1.14
CKAP5-209ENST00000528593 NINLQ9Y2I6 1382 aa7.96□□□□□ -1.14
CKAP5-209ENST00000528593 NSD3Q9BZ95 1437 aa7.95□□□□□ -1.14
CKAP5-209ENST00000528593 CHD2O14647 1828 aaKnown RBP7.95□□□□□ -1.14
CKAP5-209ENST00000528593 MAN1A2O60476 641 aa7.95□□□□□ -1.14
CKAP5-209ENST00000528593 VSIG8P0DPA2 414 aa7.95□□□□□ -1.14
CKAP5-209ENST00000528593 CC2D1BQ5T0F9 858 aaKnown RBP7.95□□□□□ -1.14
CKAP5-209ENST00000528593 C14orf37Q86TY3 774 aa7.95□□□□□ -1.14
CKAP5-209ENST00000528593 PROSER2Q86WR7 435 aaPredicted RBP7.95□□□□□ -1.14
CKAP5-209ENST00000528593 ZNF330Q9Y3S2 320 aaPredicted RBP7.95□□□□□ -1.14
CKAP5-209ENST00000528593 A0A1W2PP64 1363 aa7.95□□□□□ -1.14
CKAP5-209ENST00000528593 ANKRD36BQ8N2N9 1353 aa7.95□□□□□ -1.14
CKAP5-209ENST00000528593 PPIP5K1Q6PFW1 1433 aa7.95□□□□□ -1.14
CKAP5-209ENST00000528593 STRCQ7RTU9 1775 aa7.94□□□□□ -1.14
CKAP5-209ENST00000528593 NKTRP30414 1462 aaKnown RBP7.94□□□□□ -1.14
CKAP5-209ENST00000528593 ATP7BP35670 1465 aa7.94□□□□□ -1.14
CKAP5-209ENST00000528593 TTLL8A6PVC2 850 aa7.94□□□□□ -1.14
CKAP5-209ENST00000528593 CCER2I3L3R5 266 aa7.94□□□□□ -1.14
CKAP5-209ENST00000528593 RAB15P59190 212 aa7.94□□□□□ -1.14
CKAP5-209ENST00000528593 ERVK-9P63128 1117 aa7.94□□□□□ -1.14
CKAP5-209ENST00000528593 RNF20Q5VTR2 975 aa7.94□□□□□ -1.14
CKAP5-209ENST00000528593 HDGFL2Q7Z4V5 671 aaPredicted RBP7.94□□□□□ -1.14
CKAP5-209ENST00000528593 AGBL1Q96MI9 1066 aa7.94□□□□□ -1.14
CKAP5-209ENST00000528593 TERF2IPQ9NYB0 399 aa7.94□□□□□ -1.14
CKAP5-209ENST00000528593 ADGRL3Q9HAR2 1447 aa7.94□□□□□ -1.14
CKAP5-209ENST00000528593 CD163L1Q9NR16 1453 aa7.94□□□□□ -1.14
CKAP5-209ENST00000528593 RALBP1Q15311 655 aa7.93□□□□□ -1.14
CKAP5-209ENST00000528593 SLC16A10Q8TF71 515 aa7.93□□□□□ -1.14
CKAP5-209ENST00000528593 TMEM94Q12767 1356 aa7.93□□□□□ -1.14
CKAP5-209ENST00000528593 PARD3Q8TEW0 1356 aa7.93□□□□□ -1.14
CKAP5-209ENST00000528593 CDC42BPGQ6DT37 1551 aa7.93□□□□□ -1.14
CKAP5-209ENST00000528593 PTGIRP43119 386 aa7.92□□□□□ -1.14
CKAP5-209ENST00000528593 RELBQ01201 579 aa7.92□□□□□ -1.14
CKAP5-209ENST00000528593 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.92□□□□□ -1.14
CKAP5-209ENST00000528593 IRF7Q92985 503 aa7.92□□□□□ -1.14
CKAP5-209ENST00000528593 PRM3Q9NNZ6 103 aa7.92□□□□□ -1.14
CKAP5-209ENST00000528593 CYLDQ9NQC7 956 aa7.92□□□□□ -1.14
CKAP5-209ENST00000528593 ERBB4Q15303 1308 aa7.92□□□□□ -1.14
CKAP5-209ENST00000528593 ZNF335Q9H4Z2 1342 aaPredicted RBP7.92□□□□□ -1.14
CKAP5-209ENST00000528593 NPC1L1Q9UHC9 1359 aa7.92□□□□□ -1.14
CKAP5-209ENST00000528593 ANKARQ7Z5J8 1434 aa7.92□□□□□ -1.14
CKAP5-209ENST00000528593 NALCNQ8IZF0 1738 aa7.92□□□□□ -1.14
CKAP5-209ENST00000528593 CTSOP43234 321 aaPredicted RBP7.91□□□□□ -1.14
CKAP5-209ENST00000528593 VEGFBP49765 207 aa7.91□□□□□ -1.14
CKAP5-209ENST00000528593 CCDC184Q52MB2 194 aa7.91□□□□□ -1.14
CKAP5-209ENST00000528593 INSM2Q96T92 566 aaPredicted RBP7.91□□□□□ -1.14
CKAP5-209ENST00000528593 CGNL1Q0VF96 1302 aa7.91□□□□□ -1.14
CKAP5-209ENST00000528593 MYBBP1AQ9BQG0 1328 aaKnown RBP7.91□□□□□ -1.14
CKAP5-209ENST00000528593 USP32Q8NFA0 1604 aa7.9□□□□□ -1.14
CKAP5-209ENST00000528593 CPSF1Q10570 1443 aaKnown RBP7.9□□□□□ -1.14
CKAP5-209ENST00000528593 ACEP12821 1306 aa7.9□□□□□ -1.14
CKAP5-209ENST00000528593 FOXD4L5Q5VV16 416 aaPredicted RBP7.9□□□□□ -1.14
CKAP5-209ENST00000528593 CC2D2BQ6DHV5 1058 aa7.9□□□□□ -1.14
CKAP5-209ENST00000528593 PMFBP1Q8TBY8 1022 aa7.9□□□□□ -1.14
CKAP5-209ENST00000528593 RNF217Q8TC41 542 aa7.9□□□□□ -1.14
CKAP5-209ENST00000528593 YTHDC1Q96MU7 727 aaKnown RBP7.9□□□□□ -1.14
CKAP5-209ENST00000528593 MRS2Q9HD23 443 aa7.9□□□□□ -1.14
CKAP5-209ENST00000528593 STRCP1A6NGW2 1772 aa7.89□□□□□ -1.15
CKAP5-209ENST00000528593 FMN2Q9NZ56 1722 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms