RNA–Protein interactions for RNA: ENST00000528316.5

AP003555.1-201, humanhuman

TSL 3

Gene AP003555.1, Length 548 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-201ENST00000528316 PRKAR2BP31323 418 aa11.23□□□□□ -0.61
AP003555.1-201ENST00000528316 NYAP1Q6ZVC0 841 aa11.23□□□□□ -0.61
AP003555.1-201ENST00000528316 CFAP53Q96M91 514 aa11.23□□□□□ -0.61
AP003555.1-201ENST00000528316 RSPH6AQ9H0K4 717 aa11.23□□□□□ -0.61
AP003555.1-201ENST00000528316 TRAF7Q6Q0C0 670 aa11.22□□□□□ -0.61
AP003555.1-201ENST00000528316 LAPTM4BQ86VI4 370 aa11.22□□□□□ -0.61
AP003555.1-201ENST00000528316 GAS2L2Q8NHY3 880 aa11.22□□□□□ -0.61
AP003555.1-201ENST00000528316 CCDC87Q9NVE4 849 aa11.22□□□□□ -0.61
AP003555.1-201ENST00000528316 USP42Q9H9J4 1324 aaKnown RBP11.21□□□□□ -0.61
AP003555.1-201ENST00000528316 KCNQ3O43525 872 aa11.21□□□□□ -0.61
AP003555.1-201ENST00000528316 U2AF1L5P0DN76 240 aaPredicted RBP11.21□□□□□ -0.61
AP003555.1-201ENST00000528316 U2AF1Q01081 240 aaKnown RBP eCLIP11.21□□□□□ -0.61
AP003555.1-201ENST00000528316 DDR1Q08345 913 aa11.21□□□□□ -0.61
AP003555.1-201ENST00000528316 USPL1Q5W0Q7 1092 aa11.21□□□□□ -0.61
AP003555.1-201ENST00000528316 NUDCQ9Y266 331 aa11.21□□□□□ -0.61
AP003555.1-201ENST00000528316 ZBTB1Q9Y2K1 713 aa11.21□□□□□ -0.61
AP003555.1-201ENST00000528316 PCDHGA10Q9Y5H3 936 aa11.21□□□□□ -0.61
AP003555.1-201ENST00000528316 PARP3Q9Y6F1 533 aa11.21□□□□□ -0.61
AP003555.1-201ENST00000528316 MYH14Q7Z406 1995 aaKnown RBP11.21□□□□□ -0.62
AP003555.1-201ENST00000528316 SCN11AQ9UI33 1791 aa11.21□□□□□ -0.62
AP003555.1-201ENST00000528316 ZNF831Q5JPB2 1677 aa11.2□□□□□ -0.62
AP003555.1-201ENST00000528316 SOS1Q07889 1333 aaPredicted RBP11.2□□□□□ -0.62
AP003555.1-201ENST00000528316 DPEP1P16444 411 aa11.2□□□□□ -0.62
AP003555.1-201ENST00000528316 TM4SF1P30408 202 aa11.2□□□□□ -0.62
AP003555.1-201ENST00000528316 TGFB2P61812 414 aa11.2□□□□□ -0.62
AP003555.1-201ENST00000528316 TEFQ10587 303 aa11.2□□□□□ -0.62
AP003555.1-201ENST00000528316 ZNF496Q96IT1 587 aaPredicted RBP11.2□□□□□ -0.62
AP003555.1-201ENST00000528316 ZFRQ96KR1 1074 aaKnown RBP11.2□□□□□ -0.62
AP003555.1-201ENST00000528316 COL5A3P25940 1745 aaPredicted RBP11.2□□□□□ -0.62
AP003555.1-201ENST00000528316 KCPQ6ZWJ8 1503 aa11.19□□□□□ -0.62
AP003555.1-201ENST00000528316 MRC1P22897 1456 aa11.19□□□□□ -0.62
AP003555.1-201ENST00000528316 ZPR1O75312 459 aa11.19□□□□□ -0.62
AP003555.1-201ENST00000528316 KCNA3P22001 575 aa11.19□□□□□ -0.62
AP003555.1-201ENST00000528316 CANXP27824 592 aaKnown RBP11.19□□□□□ -0.62
AP003555.1-201ENST00000528316 ZNF790Q6PG37 636 aa11.19□□□□□ -0.62
AP003555.1-201ENST00000528316 TTC5Q8N0Z6 440 aa11.19□□□□□ -0.62
AP003555.1-201ENST00000528316 TJP1Q07157 1748 aa11.18□□□□□ -0.62
AP003555.1-201ENST00000528316 CICQ96RK0 1608 aaPredicted RBP11.18□□□□□ -0.62
AP003555.1-201ENST00000528316 CHD4Q14839 1912 aa11.18□□□□□ -0.62
AP003555.1-201ENST00000528316 GTPBP6O43824 516 aaPredicted RBP11.18□□□□□ -0.62
AP003555.1-201ENST00000528316 GFRA3O60609 400 aa11.18□□□□□ -0.62
AP003555.1-201ENST00000528316 FCHSD2O94868 740 aa11.18□□□□□ -0.62
AP003555.1-201ENST00000528316 DCTN1Q14203 1278 aa11.18□□□□□ -0.62
AP003555.1-201ENST00000528316 NARFQ9UHQ1 456 aa11.18□□□□□ -0.62
AP003555.1-201ENST00000528316 BCS1LQ9Y276 419 aa11.18□□□□□ -0.62
AP003555.1-201ENST00000528316 PXDNLA1KZ92 1463 aa11.18□□□□□ -0.62
AP003555.1-201ENST00000528316 BTBD11A6QL63 1104 aa11.17□□□□□ -0.62
AP003555.1-201ENST00000528316 POLRMTO00411 1230 aaKnown RBP11.17□□□□□ -0.62
AP003555.1-201ENST00000528316 STARD3NLO95772 234 aa11.17□□□□□ -0.62
AP003555.1-201ENST00000528316 C1QTNF8P60827 252 aa11.17□□□□□ -0.62
AP003555.1-201ENST00000528316 MCM10Q7L590 875 aa11.17□□□□□ -0.62
AP003555.1-201ENST00000528316 KIAA1468Q9P260 1216 aa11.17□□□□□ -0.62
AP003555.1-201ENST00000528316 ADAMTS7Q9UKP4 1686 aa11.17□□□□□ -0.62
AP003555.1-201ENST00000528316 C10orf71Q711Q0 1435 aa11.17□□□□□ -0.62
AP003555.1-201ENST00000528316 CEMIPQ8WUJ3 1361 aa11.16□□□□□ -0.62
AP003555.1-201ENST00000528316 HEG1Q9ULI3 1381 aa11.16□□□□□ -0.62
AP003555.1-201ENST00000528316 CHRNA5P30532 468 aa11.16□□□□□ -0.62
AP003555.1-201ENST00000528316 EIF5P55010 431 aaKnown RBP11.16□□□□□ -0.62
AP003555.1-201ENST00000528316 NFIXQ14938 502 aa11.16□□□□□ -0.62
AP003555.1-201ENST00000528316 ZNF526Q8TF50 670 aaPredicted RBP11.16□□□□□ -0.62
AP003555.1-201ENST00000528316 COL15A1P39059 1388 aa11.16□□□□□ -0.62
AP003555.1-201ENST00000528316 PRAMEF22A3QJZ6 481 aa11.15□□□□□ -0.62
AP003555.1-201ENST00000528316 GIGYF1O75420 1035 aaPredicted RBP11.15□□□□□ -0.62
AP003555.1-201ENST00000528316 A1BGP04217 495 aa11.15□□□□□ -0.62
AP003555.1-201ENST00000528316 PDE4AP27815 886 aa11.15□□□□□ -0.62
AP003555.1-201ENST00000528316 ARHGAP27Q6ZUM4 889 aa11.15□□□□□ -0.62
AP003555.1-201ENST00000528316 FMNL2Q96PY5 1086 aa11.15□□□□□ -0.62
AP003555.1-201ENST00000528316 TEX13AQ9BXU3 409 aaPredicted RBP11.15□□□□□ -0.62
AP003555.1-201ENST00000528316 TSHZ2Q9NRE2 1034 aa11.15□□□□□ -0.62
AP003555.1-201ENST00000528316 TBC1D2BQ9UPU7 963 aa11.15□□□□□ -0.62
AP003555.1-201ENST00000528316 USP16Q9Y5T5 823 aa11.15□□□□□ -0.62
AP003555.1-201ENST00000528316 ATP10DQ9P241 1426 aa11.15□□□□□ -0.62
AP003555.1-201ENST00000528316 C4AP0C0L4 1744 aa11.15□□□□□ -0.63
AP003555.1-201ENST00000528316 SERPINB2P05120 415 aa11.14□□□□□ -0.63
AP003555.1-201ENST00000528316 BICDL1Q6ZP65 573 aa11.14□□□□□ -0.63
AP003555.1-201ENST00000528316 RTF1Q92541 710 aaKnown RBP11.14□□□□□ -0.63
AP003555.1-201ENST00000528316 RYDENQ9NUL5 291 aaKnown RBP11.14□□□□□ -0.63
AP003555.1-201ENST00000528316 MIS18AQ9NYP9 233 aa11.14□□□□□ -0.63
AP003555.1-201ENST00000528316 PIM2Q9P1W9 311 aa11.14□□□□□ -0.63
AP003555.1-201ENST00000528316 ZNF330Q9Y3S2 320 aaPredicted RBP11.14□□□□□ -0.63
AP003555.1-201ENST00000528316 A0A087WZG4 1122 aa11.13□□□□□ -0.63
AP003555.1-201ENST00000528316 PIP4K2AP48426 406 aaPredicted RBP11.13□□□□□ -0.63
AP003555.1-201ENST00000528316 MAP3K9P80192 1104 aa11.13□□□□□ -0.63
AP003555.1-201ENST00000528316 SEPT9Q9UHD8 586 aaPredicted RBP11.13□□□□□ -0.63
AP003555.1-201ENST00000528316 HTATSF1O43719 755 aaKnown RBP11.12□□□□□ -0.63
AP003555.1-201ENST00000528316 IL6STP40189 918 aaPredicted RBP11.12□□□□□ -0.63
AP003555.1-201ENST00000528316 DDX10Q13206 875 aaKnown RBP11.12□□□□□ -0.63
AP003555.1-201ENST00000528316 DALRD3Q5D0E6 543 aaKnown RBP11.12□□□□□ -0.63
AP003555.1-201ENST00000528316 TBC1D9BQ66K14 1250 aa11.12□□□□□ -0.63
AP003555.1-201ENST00000528316 PLEKHF1Q96S99 279 aa11.12□□□□□ -0.63
AP003555.1-201ENST00000528316 GPBP1L1Q9HC44 474 aaPredicted RBP11.12□□□□□ -0.63
AP003555.1-201ENST00000528316 N4BP2Q86UW6 1770 aaPredicted RBP11.12□□□□□ -0.63
AP003555.1-201ENST00000528316 ADCY9O60503 1353 aa11.12□□□□□ -0.63
AP003555.1-201ENST00000528316 KIAA1551Q9HCM1 1747 aa11.12□□□□□ -0.63
AP003555.1-201ENST00000528316 SENP3-EIF4A1A0A087X0R7 540 aa11.11□□□□□ -0.63
AP003555.1-201ENST00000528316 TAF7Q15545 349 aaPredicted RBP11.11□□□□□ -0.63
AP003555.1-201ENST00000528316 CCDC24Q8N4L8 307 aa11.11□□□□□ -0.63
AP003555.1-201ENST00000528316 EMILIN3Q9NT22 766 aa11.11□□□□□ -0.63
AP003555.1-201ENST00000528316 KIF13BQ9NQT8 1826 aa11.11□□□□□ -0.63
AP003555.1-201ENST00000528316 VIRMAQ69YN4 1812 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms