RNA–Protein interactions for RNA: ENST00000528201.1

PACSIN3-204, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-204ENST00000528201 CACNA1SQ13698 1873 aa31.14■■■□□ 2.58
PACSIN3-204ENST00000528201 TIAM2Q8IVF5 1701 aa31.13■■■□□ 2.57
PACSIN3-204ENST00000528201 ALDH1B1P30837 517 aa31.13■■■□□ 2.57
PACSIN3-204ENST00000528201 HOXA10P31260 410 aaPredicted RBP31.13■■■□□ 2.57
PACSIN3-204ENST00000528201 GNAI1P63096 354 aa31.13■■■□□ 2.57
PACSIN3-204ENST00000528201 TCIRG1Q13488 830 aa31.12■■■□□ 2.57
PACSIN3-204ENST00000528201 SYNE4Q8N205 404 aa31.12■■■□□ 2.57
PACSIN3-204ENST00000528201 RBM46Q8TBY0 533 aaKnown RBP31.12■■■□□ 2.57
PACSIN3-204ENST00000528201 DBF4Q9UBU7 674 aaPredicted RBP31.12■■■□□ 2.57
PACSIN3-204ENST00000528201 SNED1Q8TER0 1413 aa31.12■■■□□ 2.57
PACSIN3-204ENST00000528201 ELL2O00472 640 aaPredicted RBP31.11■■■□□ 2.57
PACSIN3-204ENST00000528201 CALD1Q05682 793 aaKnown RBP31.11■■■□□ 2.57
PACSIN3-204ENST00000528201 ZNF428Q96B54 188 aa31.11■■■□□ 2.57
PACSIN3-204ENST00000528201 MRS2Q9HD23 443 aa31.11■■■□□ 2.57
PACSIN3-204ENST00000528201 POTECB2RU33 542 aa31.1■■■□□ 2.57
PACSIN3-204ENST00000528201 FKBP4Q02790 459 aaKnown RBP eCLIP31.1■■■□□ 2.578e-10■□□□□ 10.2
PACSIN3-204ENST00000528201 HSP90AB3PQ58FF7 597 aa31.1■■■□□ 2.57
PACSIN3-204ENST00000528201 SLC10A5Q5PT55 438 aa31.1■■■□□ 2.57
PACSIN3-204ENST00000528201 C8orf58Q8NAV2 365 aa31.1■■■□□ 2.57
PACSIN3-204ENST00000528201 RPGRQ92834 1020 aaKnown RBP31.1■■■□□ 2.57
PACSIN3-204ENST00000528201 ZNF277Q9NRM2 450 aaPredicted RBP31.1■■■□□ 2.57
PACSIN3-204ENST00000528201 ANP32CO43423 234 aa31.09■■■□□ 2.57
PACSIN3-204ENST00000528201 C16orf71Q8IYS4 520 aaPredicted RBP31.09■■■□□ 2.57
PACSIN3-204ENST00000528201 PLBD2Q8NHP8 589 aa31.09■■■□□ 2.57
PACSIN3-204ENST00000528201 CCDC88AQ3V6T2 1871 aa31.08■■■□□ 2.57
PACSIN3-204ENST00000528201 ANKRD13DQ6ZTN6 518 aa31.07■■■□□ 2.56
PACSIN3-204ENST00000528201 RTKN2Q8IZC4 609 aa31.07■■■□□ 2.56
PACSIN3-204ENST00000528201 HYPKQ9NX55 129 aa31.07■■■□□ 2.56
PACSIN3-204ENST00000528201 HCLS1P14317 486 aaPredicted RBP31.06■■■□□ 2.56
PACSIN3-204ENST00000528201 VEGFAP15692 232 aaPredicted RBP31.06■■■□□ 2.56
PACSIN3-204ENST00000528201 CRAMP1Q96RY5 1269 aa31.06■■■□□ 2.56
PACSIN3-204ENST00000528201 WWC1Q8IX03 1113 aa31.05■■■□□ 2.56
PACSIN3-204ENST00000528201 TSPYL6Q8N831 410 aa31.05■■■□□ 2.56
PACSIN3-204ENST00000528201 RBM17Q96I25 401 aaKnown RBP31.05■■■□□ 2.56
PACSIN3-204ENST00000528201 NLRP3Q96P20 1036 aa31.05■■■□□ 2.56
PACSIN3-204ENST00000528201 RNF123Q5XPI4 1314 aa31.04■■■□□ 2.56
PACSIN3-204ENST00000528201 CCDC27Q2M243 656 aa31.04■■■□□ 2.56
PACSIN3-204ENST00000528201 DPY19L2Q6NUT2 758 aa31.04■■■□□ 2.56
PACSIN3-204ENST00000528201 TSR2Q969E8 191 aaKnown RBP31.04■■■□□ 2.56
PACSIN3-204ENST00000528201 ISCA1Q9BUE6 129 aa31.04■■■□□ 2.56
PACSIN3-204ENST00000528201 TRMT112Q9UI30 125 aaKnown RBP31.04■■■□□ 2.56
PACSIN3-204ENST00000528201 ATP5J2-PTCD1G3V325 749 aa31.03■■■□□ 2.56
PACSIN3-204ENST00000528201 DDNO94850 711 aaPredicted RBP31.03■■■□□ 2.56
PACSIN3-204ENST00000528201 PHAXQ9H814 394 aaKnown RBP31.03■■■□□ 2.56
PACSIN3-204ENST00000528201 TCERG1O14776 1098 aaKnown RBP31.02■■■□□ 2.56
PACSIN3-204ENST00000528201 SH3TC1Q8TE82 1336 aa31.01■■■□□ 2.56
PACSIN3-204ENST00000528201 DICER1Q9UPY3 1922 aaKnown RBP31.01■■■□□ 2.55
PACSIN3-204ENST00000528201 PPEF1O14829 653 aaPredicted RBP31.01■■■□□ 2.55
PACSIN3-204ENST00000528201 FSTL1Q12841 308 aa31.01■■■□□ 2.55
PACSIN3-204ENST00000528201 ANKRD36CQ5JPF3 1778 aa31.01■■■□□ 2.55
PACSIN3-204ENST00000528201 ZNF541Q9H0D2 1346 aa31■■■□□ 2.55
PACSIN3-204ENST00000528201 PSMD1Q99460 953 aa31■■■□□ 2.55
PACSIN3-204ENST00000528201 ABCC4O15439 1325 aa30.99■■■□□ 2.55
PACSIN3-204ENST00000528201 WDR90Q96KV7 1748 aa30.99■■■□□ 2.55
PACSIN3-204ENST00000528201 IARSP41252 1262 aaKnown RBP30.99■■■□□ 2.55
PACSIN3-204ENST00000528201 CC2D2BQ6DHV5 1058 aa30.99■■■□□ 2.55
PACSIN3-204ENST00000528201 APLP1P51693 650 aa30.98■■■□□ 2.55
PACSIN3-204ENST00000528201 COL4A5P29400 1685 aa30.97■■■□□ 2.55
PACSIN3-204ENST00000528201 SMC1BQ8NDV3 1235 aa30.97■■■□□ 2.55
PACSIN3-204ENST00000528201 FAM89AQ96GI7 184 aa30.96■■■□□ 2.55
PACSIN3-204ENST00000528201 HTRA3P83110 453 aa30.95■■■□□ 2.55
PACSIN3-204ENST00000528201 TRIM28Q13263 835 aaKnown RBP30.95■■■□□ 2.55
PACSIN3-204ENST00000528201 ATP6V0A2Q9Y487 856 aa30.95■■■□□ 2.55
PACSIN3-204ENST00000528201 FZD9O00144 591 aa30.94■■■□□ 2.54
PACSIN3-204ENST00000528201 GOLGA2Q08379 1002 aa30.94■■■□□ 2.54
PACSIN3-204ENST00000528201 RIC3Q7Z5B4 369 aa30.94■■■□□ 2.54
PACSIN3-204ENST00000528201 NCBP3Q53F19 620 aaKnown RBP30.93■■■□□ 2.54
PACSIN3-204ENST00000528201 CCDC30Q5VVM6 783 aa30.93■■■□□ 2.54
PACSIN3-204ENST00000528201 L3MBTL3Q96JM7 780 aaPredicted RBP30.93■■■□□ 2.54
PACSIN3-204ENST00000528201 SALL2Q9Y467 1007 aaPredicted RBP30.93■■■□□ 2.54
PACSIN3-204ENST00000528201 IL16Q14005 1332 aa30.93■■■□□ 2.54
PACSIN3-204ENST00000528201 POTEIP0CG38 1075 aa30.92■■■□□ 2.54
PACSIN3-204ENST00000528201 POTEJP0CG39 1038 aa30.92■■■□□ 2.54
PACSIN3-204ENST00000528201 RTL5Q5HYW3 569 aaPredicted RBP30.92■■■□□ 2.54
PACSIN3-204ENST00000528201 DNAJC5GQ8N7S2 189 aa30.92■■■□□ 2.54
PACSIN3-204ENST00000528201 GRIPAP1Q4V328 841 aa30.9■■■□□ 2.54
PACSIN3-204ENST00000528201 MYD88Q99836 296 aa30.9■■■□□ 2.54
PACSIN3-204ENST00000528201 LAMB2P55268 1798 aa30.89■■■□□ 2.54
PACSIN3-204ENST00000528201 BBOX1O75936 387 aa30.89■■■□□ 2.54
PACSIN3-204ENST00000528201 GRAPQ13588 217 aa30.89■■■□□ 2.54
PACSIN3-204ENST00000528201 DDX46Q7L014 1031 aaKnown RBP30.89■■■□□ 2.54
PACSIN3-204ENST00000528201 GRAPLQ8TC17 118 aaPredicted RBP30.89■■■□□ 2.54
PACSIN3-204ENST00000528201 FANCIQ9NVI1 1328 aa30.88■■■□□ 2.53
PACSIN3-204ENST00000528201 SF3B3Q15393 1217 aaKnown RBP30.87■■■□□ 2.53
PACSIN3-204ENST00000528201 TWISTNBQ3B726 338 aaPredicted RBP30.87■■■□□ 2.53
PACSIN3-204ENST00000528201 IRS4O14654 1257 aaPredicted RBP30.86■■■□□ 2.53
PACSIN3-204ENST00000528201 SP8Q8IXZ3 490 aa30.86■■■□□ 2.53
PACSIN3-204ENST00000528201 LARGE2Q8N3Y3 721 aa30.86■■■□□ 2.53
PACSIN3-204ENST00000528201 JDP2Q8WYK2 163 aa30.86■■■□□ 2.53
PACSIN3-204ENST00000528201 TAF1DQ9H5J8 278 aaPredicted RBP30.86■■■□□ 2.53
PACSIN3-204ENST00000528201 COL4A1P02462 1669 aa30.86■■■□□ 2.53
PACSIN3-204ENST00000528201 DDX60Q8IY21 1712 aaKnown RBP30.86■■■□□ 2.53
PACSIN3-204ENST00000528201 G2E3Q7L622 706 aa30.85■■■□□ 2.53
PACSIN3-204ENST00000528201 FAM9BQ8IZU0 186 aa30.85■■■□□ 2.53
PACSIN3-204ENST00000528201 ZBTB38Q8NAP3 1195 aaPredicted RBP30.85■■■□□ 2.53
PACSIN3-204ENST00000528201 METTL22Q9BUU2 404 aaPredicted RBP30.85■■■□□ 2.53
PACSIN3-204ENST00000528201 RTFDC1Q9BY42 306 aaPredicted RBP30.85■■■□□ 2.53
PACSIN3-204ENST00000528201 AOC3Q16853 763 aa30.84■■■□□ 2.53
PACSIN3-204ENST00000528201 JARID2Q92833 1246 aaPredicted RBP30.84■■■□□ 2.53
PACSIN3-204ENST00000528201 CELF1Q92879 486 aaKnown RBP30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms