RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 ERFEQ4G0M1 354 aa22.75■■□□□ 1.23
NXF1-206ENST00000527902 BRIP1Q9BX63 1249 aa22.75■■□□□ 1.23
NXF1-206ENST00000527902 LAMB2P55268 1798 aa22.75■■□□□ 1.23
NXF1-206ENST00000527902 NYXQ9GZU5 481 aa22.74■■□□□ 1.23
NXF1-206ENST00000527902 CACNA1SQ13698 1873 aa22.74■■□□□ 1.23
NXF1-206ENST00000527902 TRIM28Q13263 835 aaKnown RBP22.73■■□□□ 1.23
NXF1-206ENST00000527902 ALDH1L2Q3SY69 923 aa22.73■■□□□ 1.23
NXF1-206ENST00000527902 PPP1R42Q7Z4L9 355 aa22.73■■□□□ 1.23
NXF1-206ENST00000527902 SYNE4Q8N205 404 aa22.73■■□□□ 1.23
NXF1-206ENST00000527902 UTP14AQ9BVJ6 771 aaKnown RBP22.73■■□□□ 1.23
NXF1-206ENST00000527902 F6X3S4 739 aa22.72■■□□□ 1.23
NXF1-206ENST00000527902 IGKV5-2P06315 115 aa22.72■■□□□ 1.23
NXF1-206ENST00000527902 ARFGEF1Q9Y6D6 1849 aa22.71■■□□□ 1.23
NXF1-206ENST00000527902 YBX3P16989 372 aaKnown RBP eCLIP22.71■■□□□ 1.233e-8■□□□□ 10.5
NXF1-206ENST00000527902 GTF2E1P29083 439 aaPredicted RBP22.71■■□□□ 1.23
NXF1-206ENST00000527902 RARSP54136 660 aaKnown RBP22.71■■□□□ 1.23
NXF1-206ENST00000527902 C2CD5Q86YS7 1000 aa22.71■■□□□ 1.23
NXF1-206ENST00000527902 SMC4Q9NTJ3 1288 aa22.71■■□□□ 1.23
NXF1-206ENST00000527902 RIC1Q4ADV7 1423 aa22.71■■□□□ 1.23
NXF1-206ENST00000527902 PDE6BP35913 854 aa22.7■■□□□ 1.22
NXF1-206ENST00000527902 DNAAF4Q8WXU2 420 aa22.7■■□□□ 1.22
NXF1-206ENST00000527902 TRMT112Q9UI30 125 aaKnown RBP22.7■■□□□ 1.22
NXF1-206ENST00000527902 KLRG2A4D1S0 409 aaPredicted RBP22.69■■□□□ 1.22
NXF1-206ENST00000527902 CWF19L2Q2TBE0 894 aaKnown RBP22.69■■□□□ 1.22
NXF1-206ENST00000527902 C3orf67Q6ZVT6 689 aa22.69■■□□□ 1.22
NXF1-206ENST00000527902 PELP1Q8IZL8 1130 aaKnown RBP22.69■■□□□ 1.22
NXF1-206ENST00000527902 RNF123Q5XPI4 1314 aa22.68■■□□□ 1.22
NXF1-206ENST00000527902 CCDC191Q8NCU4 936 aa22.68■■□□□ 1.22
NXF1-206ENST00000527902 FAM89AQ96GI7 184 aa22.68■■□□□ 1.22
NXF1-206ENST00000527902 SH3TC1Q8TE82 1336 aa22.67■■□□□ 1.22
NXF1-206ENST00000527902 SLX4Q8IY92 1834 aa22.67■■□□□ 1.22
NXF1-206ENST00000527902 NEURL1BA8MQ27 555 aa22.67■■□□□ 1.22
NXF1-206ENST00000527902 H0YIN7 160 aa22.67■■□□□ 1.22
NXF1-206ENST00000527902 SRGNP10124 158 aa22.67■■□□□ 1.22
NXF1-206ENST00000527902 RTL5Q5HYW3 569 aaPredicted RBP22.67■■□□□ 1.22
NXF1-206ENST00000527902 SLC10A5Q5PT55 438 aa22.67■■□□□ 1.22
NXF1-206ENST00000527902 YTHDC1Q96MU7 727 aaKnown RBP22.67■■□□□ 1.22
NXF1-206ENST00000527902 CWC25Q9NXE8 425 aaPredicted RBP22.67■■□□□ 1.22
NXF1-206ENST00000527902 HCLS1P14317 486 aaPredicted RBP22.66■■□□□ 1.22
NXF1-206ENST00000527902 NEXNQ0ZGT2 675 aa22.66■■□□□ 1.22
NXF1-206ENST00000527902 GPR162Q16538 588 aa22.66■■□□□ 1.22
NXF1-206ENST00000527902 JARID2Q92833 1246 aaPredicted RBP22.66■■□□□ 1.22
NXF1-206ENST00000527902 PIM2Q9P1W9 311 aa22.66■■□□□ 1.22
NXF1-206ENST00000527902 PTPRCP08575 1304 aa22.65■■□□□ 1.22
NXF1-206ENST00000527902 BRPF1P55201 1214 aaPredicted RBP22.65■■□□□ 1.22
NXF1-206ENST00000527902 CRY2Q49AN0 593 aa22.65■■□□□ 1.22
NXF1-206ENST00000527902 BEND3Q5T5X7 828 aa22.65■■□□□ 1.22
NXF1-206ENST00000527902 TAF1P21675 1872 aa22.64■■□□□ 1.22
NXF1-206ENST00000527902 BCAR3O75815 825 aa22.64■■□□□ 1.21
NXF1-206ENST00000527902 ZBTB38Q8NAP3 1195 aaPredicted RBP22.64■■□□□ 1.21
NXF1-206ENST00000527902 LINS1Q8NG48 757 aa22.64■■□□□ 1.21
NXF1-206ENST00000527902 PDZRN3Q9UPQ7 1066 aa22.64■■□□□ 1.21
NXF1-206ENST00000527902 BCS1LQ9Y276 419 aa22.64■■□□□ 1.21
NXF1-206ENST00000527902 MYH3P11055 1940 aa22.63■■□□□ 1.21
NXF1-206ENST00000527902 PCCAP05165 728 aaPredicted RBP22.63■■□□□ 1.21
NXF1-206ENST00000527902 ZNF622Q969S3 477 aaKnown RBP eCLIP22.63■■□□□ 1.21
NXF1-206ENST00000527902 NOB1Q9ULX3 412 aaKnown RBP22.63■■□□□ 1.21
NXF1-206ENST00000527902 DALRD3Q5D0E6 543 aaKnown RBP22.62■■□□□ 1.21
NXF1-206ENST00000527902 STYK1Q6J9G0 422 aa22.62■■□□□ 1.21
NXF1-206ENST00000527902 MASTLQ96GX5 879 aa22.62■■□□□ 1.21
NXF1-206ENST00000527902 NPR1P16066 1061 aa22.61■■□□□ 1.21
NXF1-206ENST00000527902 GCKRQ14397 625 aa22.61■■□□□ 1.21
NXF1-206ENST00000527902 SLC4A10Q6U841 1118 aa22.61■■□□□ 1.21
NXF1-206ENST00000527902 TTLL6Q8N841 843 aa22.61■■□□□ 1.21
NXF1-206ENST00000527902 COL4A1P02462 1669 aa22.61■■□□□ 1.21
NXF1-206ENST00000527902 IRS4O14654 1257 aaPredicted RBP22.6■■□□□ 1.21
NXF1-206ENST00000527902 NLRP3Q96P20 1036 aa22.6■■□□□ 1.21
NXF1-206ENST00000527902 CHD4Q14839 1912 aa22.59■■□□□ 1.21
NXF1-206ENST00000527902 H7C1W4 665 aa22.59■■□□□ 1.21
NXF1-206ENST00000527902 CDHR2Q9BYE9 1310 aa22.58■■□□□ 1.21
NXF1-206ENST00000527902 DCAF8L1A6NGE4 600 aa22.58■■□□□ 1.21
NXF1-206ENST00000527902 HOXA10P31260 410 aaPredicted RBP22.58■■□□□ 1.21
NXF1-206ENST00000527902 CASP7P55210 303 aa22.58■■□□□ 1.21
NXF1-206ENST00000527902 PRPF40BQ6NWY9 871 aaKnown RBP22.58■■□□□ 1.21
NXF1-206ENST00000527902 UBE3BQ7Z3V4 1068 aa22.58■■□□□ 1.21
NXF1-206ENST00000527902 KIF16BQ96L93 1317 aa22.57■■□□□ 1.2
NXF1-206ENST00000527902 RPGRQ92834 1020 aaKnown RBP22.57■■□□□ 1.2
NXF1-206ENST00000527902 CNKSR1Q969H4 720 aa22.57■■□□□ 1.2
NXF1-206ENST00000527902 SRCIN1Q9C0H9 1055 aa22.57■■□□□ 1.2
NXF1-206ENST00000527902 TNNQ9UQP3 1299 aa22.57■■□□□ 1.2
NXF1-206ENST00000527902 FER1L6Q2WGJ9 1857 aa22.56■■□□□ 1.2
NXF1-206ENST00000527902 ALDH1L1O75891 902 aa22.56■■□□□ 1.2
NXF1-206ENST00000527902 SLC51AQ86UW1 340 aa22.56■■□□□ 1.2
NXF1-206ENST00000527902 GRIN3BO60391 1043 aa22.55■■□□□ 1.2
NXF1-206ENST00000527902 SF3B3Q15393 1217 aaKnown RBP22.55■■□□□ 1.2
NXF1-206ENST00000527902 ABCC4O15439 1325 aa22.55■■□□□ 1.2
NXF1-206ENST00000527902 C7orf43Q8WVR3 580 aa22.54■■□□□ 1.2
NXF1-206ENST00000527902 ARHGAP45Q92619 1136 aa22.54■■□□□ 1.2
NXF1-206ENST00000527902 FRAT1Q92837 279 aaPredicted RBP22.54■■□□□ 1.2
NXF1-206ENST00000527902 RBM17Q96I25 401 aaKnown RBP22.54■■□□□ 1.2
NXF1-206ENST00000527902 CRAMP1Q96RY5 1269 aa22.54■■□□□ 1.2
NXF1-206ENST00000527902 API5Q9BZZ5 524 aaKnown RBP22.54■■□□□ 1.2
NXF1-206ENST00000527902 ZNF219Q9P2Y4 722 aaPredicted RBP22.54■■□□□ 1.2
NXF1-206ENST00000527902 SBF1O95248 1867 aa22.54■■□□□ 1.2
NXF1-206ENST00000527902 GRM8O00222 908 aa22.53■■□□□ 1.2
NXF1-206ENST00000527902 C21orf2O43822 256 aa22.53■■□□□ 1.2
NXF1-206ENST00000527902 PDE8AO60658 829 aa22.53■■□□□ 1.2
NXF1-206ENST00000527902 TRIM27P14373 513 aa22.53■■□□□ 1.2
NXF1-206ENST00000527902 OLFM4Q6UX06 510 aa22.53■■□□□ 1.2
NXF1-206ENST00000527902 CCDC88AQ3V6T2 1871 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms