RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 GJA3Q9Y6H8 435 aa16.45■□□□□ 0.22
SRPRA-202ENST00000527817 ERVV-1B6SEH8 477 aa16.44■□□□□ 0.22
SRPRA-202ENST00000527817 EPS15P42566 896 aa16.44■□□□□ 0.22
SRPRA-202ENST00000527817 CST9Q5W186 159 aa16.44■□□□□ 0.22
SRPRA-202ENST00000527817 MCM10Q7L590 875 aa16.44■□□□□ 0.22
SRPRA-202ENST00000527817 NUDCQ9Y266 331 aa16.44■□□□□ 0.22
SRPRA-202ENST00000527817 MAP2K2P36507 400 aa16.43■□□□□ 0.22
SRPRA-202ENST00000527817 SCNN1DP51172 638 aa16.43■□□□□ 0.22
SRPRA-202ENST00000527817 FMR1Q06787 632 aaKnown RBP eCLIP16.43■□□□□ 0.22
SRPRA-202ENST00000527817 TAF7Q15545 349 aaPredicted RBP16.43■□□□□ 0.22
SRPRA-202ENST00000527817 CFAP53Q96M91 514 aa16.43■□□□□ 0.22
SRPRA-202ENST00000527817 MLLT1Q03111 559 aaPredicted RBP16.42■□□□□ 0.22
SRPRA-202ENST00000527817 CYP4F22Q6NT55 531 aa16.42■□□□□ 0.22
SRPRA-202ENST00000527817 LARGE2Q8N3Y3 721 aa16.42■□□□□ 0.22
SRPRA-202ENST00000527817 CRAMP1Q96RY5 1269 aa16.42■□□□□ 0.22
SRPRA-202ENST00000527817 TLL2Q9Y6L7 1015 aa16.42■□□□□ 0.22
SRPRA-202ENST00000527817 CCDC85CA6NKD9 419 aa16.41■□□□□ 0.22
SRPRA-202ENST00000527817 CNGB1Q14028 1251 aaPredicted RBP16.41■□□□□ 0.22
SRPRA-202ENST00000527817 NUTM1Q86Y26 1132 aa16.41■□□□□ 0.22
SRPRA-202ENST00000527817 RPGRQ92834 1020 aaKnown RBP16.41■□□□□ 0.22
SRPRA-202ENST00000527817 VPS33BQ9H267 617 aa16.41■□□□□ 0.22
SRPRA-202ENST00000527817 DCTN1Q14203 1278 aa16.4■□□□□ 0.22
SRPRA-202ENST00000527817 PAXIP1Q6ZW49 1069 aaPredicted RBP16.4■□□□□ 0.22
SRPRA-202ENST00000527817 RBM17Q96I25 401 aaKnown RBP16.4■□□□□ 0.22
SRPRA-202ENST00000527817 COL4A5P29400 1685 aa16.4■□□□□ 0.22
SRPRA-202ENST00000527817 TRAF5O00463 557 aa16.39■□□□□ 0.21
SRPRA-202ENST00000527817 U2AF1L5P0DN76 240 aaPredicted RBP16.39■□□□□ 0.21
SRPRA-202ENST00000527817 U2AF1Q01081 240 aaKnown RBP eCLIP16.39■□□□□ 0.21
SRPRA-202ENST00000527817 MAP3K15Q6ZN16 1313 aa16.39■□□□□ 0.21
SRPRA-202ENST00000527817 LTBP1Q14766 1721 aa16.39■□□□□ 0.21
SRPRA-202ENST00000527817 ABCC12Q96J65 1359 aa16.38■□□□□ 0.21
SRPRA-202ENST00000527817 RIC1Q4ADV7 1423 aa16.38■□□□□ 0.21
SRPRA-202ENST00000527817 TRPM7Q96QT4 1865 aa16.38■□□□□ 0.21
SRPRA-202ENST00000527817 CA12O43570 354 aa16.38■□□□□ 0.21
SRPRA-202ENST00000527817 NIM1KQ8IY84 436 aa16.38■□□□□ 0.21
SRPRA-202ENST00000527817 NGEFQ8N5V2 710 aa16.38■□□□□ 0.21
SRPRA-202ENST00000527817 HHIPL1Q96JK4 782 aa16.38■□□□□ 0.21
SRPRA-202ENST00000527817 ADARB2Q9NS39 739 aaKnown RBP16.38■□□□□ 0.21
SRPRA-202ENST00000527817 MIS18AQ9NYP9 233 aa16.38■□□□□ 0.21
SRPRA-202ENST00000527817 PGAP2Q9UHJ9 254 aa16.38■□□□□ 0.21
SRPRA-202ENST00000527817 AOC2O75106 756 aa16.37■□□□□ 0.21
SRPRA-202ENST00000527817 GRM1Q13255 1194 aa16.37■□□□□ 0.21
SRPRA-202ENST00000527817 SUSD4Q5VX71 490 aa16.37■□□□□ 0.21
SRPRA-202ENST00000527817 TTLL7Q6ZT98 887 aa16.37■□□□□ 0.21
SRPRA-202ENST00000527817 SAPCD2Q86UD0 394 aa16.37■□□□□ 0.21
SRPRA-202ENST00000527817 ZNF34Q8IZ26 560 aa16.37■□□□□ 0.21
SRPRA-202ENST00000527817 PNISRQ8TF01 805 aaKnown RBP16.37■□□□□ 0.21
SRPRA-202ENST00000527817 GPRC5DQ9NZD1 345 aa16.37■□□□□ 0.21
SRPRA-202ENST00000527817 THSD7BQ9C0I4 1608 aa16.37■□□□□ 0.21
SRPRA-202ENST00000527817 IBTKQ9P2D0 1353 aaPredicted RBP16.37■□□□□ 0.21
SRPRA-202ENST00000527817 PPEF1O14829 653 aaPredicted RBP16.36■□□□□ 0.21
SRPRA-202ENST00000527817 KIF6Q6ZMV9 814 aa16.36■□□□□ 0.21
SRPRA-202ENST00000527817 CCER1Q8TC90 406 aaPredicted RBP16.36■□□□□ 0.21
SRPRA-202ENST00000527817 TMX4Q9H1E5 349 aaPredicted RBP16.36■□□□□ 0.21
SRPRA-202ENST00000527817 RRP7AQ9Y3A4 280 aaKnown RBP16.36■□□□□ 0.21
SRPRA-202ENST00000527817 NUP98P52948 1817 aa16.35■□□□□ 0.21
SRPRA-202ENST00000527817 PPIP5K2O43314 1243 aa16.35■□□□□ 0.21
SRPRA-202ENST00000527817 GPTP24298 496 aa16.35■□□□□ 0.21
SRPRA-202ENST00000527817 CXCL9Q07325 125 aa16.35■□□□□ 0.21
SRPRA-202ENST00000527817 PCDH10Q9P2E7 1040 aa16.35■□□□□ 0.21
SRPRA-202ENST00000527817 ZNRF3Q9ULT6 936 aa16.35■□□□□ 0.21
SRPRA-202ENST00000527817 ATP6V0A2Q9Y487 856 aa16.35■□□□□ 0.21
SRPRA-202ENST00000527817 UBN2Q6ZU65 1347 aa16.35■□□□□ 0.21
SRPRA-202ENST00000527817 TCERG1O14776 1098 aaKnown RBP16.34■□□□□ 0.21
SRPRA-202ENST00000527817 CELF2O95319 508 aaKnown RBP16.34■□□□□ 0.21
SRPRA-202ENST00000527817 NTSR2O95665 410 aa16.34■□□□□ 0.21
SRPRA-202ENST00000527817 EIF4A1P60842 406 aaKnown RBP16.34■□□□□ 0.21
SRPRA-202ENST00000527817 AOC3Q16853 763 aa16.34■□□□□ 0.21
SRPRA-202ENST00000527817 SLC10A5Q5PT55 438 aa16.34■□□□□ 0.21
SRPRA-202ENST00000527817 GIGYF2Q6Y7W6 1299 aaKnown RBP16.34■□□□□ 0.21
SRPRA-202ENST00000527817 PPP1R42Q7Z4L9 355 aa16.34■□□□□ 0.21
SRPRA-202ENST00000527817 SUPT20HQ8NEM7 779 aa16.34■□□□□ 0.21
SRPRA-202ENST00000527817 ZC3H15Q8WU90 426 aaKnown RBP16.34■□□□□ 0.21
SRPRA-202ENST00000527817 NLRP3Q96P20 1036 aa16.34■□□□□ 0.21
SRPRA-202ENST00000527817 RTFDC1Q9BY42 306 aaPredicted RBP16.34■□□□□ 0.21
SRPRA-202ENST00000527817 TSKSQ9UJT2 592 aa16.34■□□□□ 0.21
SRPRA-202ENST00000527817 BRPF1P55201 1214 aaPredicted RBP16.33■□□□□ 0.2
SRPRA-202ENST00000527817 PARP10Q53GL7 1025 aa16.33■□□□□ 0.2
SRPRA-202ENST00000527817 C3orf67Q6ZVT6 689 aa16.33■□□□□ 0.2
SRPRA-202ENST00000527817 SLC51AQ86UW1 340 aa16.33■□□□□ 0.2
SRPRA-202ENST00000527817 MCOLN1Q9GZU1 580 aa16.33■□□□□ 0.2
SRPRA-202ENST00000527817 BBOX1O75936 387 aa16.32■□□□□ 0.2
SRPRA-202ENST00000527817 MYL6BP14649 208 aa16.32■□□□□ 0.2
SRPRA-202ENST00000527817 PPP2R1AP30153 589 aa16.32■□□□□ 0.2
SRPRA-202ENST00000527817 GMPSP49915 693 aaPredicted RBP16.32■□□□□ 0.2
SRPRA-202ENST00000527817 GLIS2Q9BZE0 524 aaPredicted RBP16.32■□□□□ 0.2
SRPRA-202ENST00000527817 ZBTB3Q9H5J0 574 aa16.32■□□□□ 0.2
SRPRA-202ENST00000527817 CASP8AP2Q9UKL3 1982 aa16.31■□□□□ 0.2
SRPRA-202ENST00000527817 CDHR2Q9BYE9 1310 aa16.31■□□□□ 0.2
SRPRA-202ENST00000527817 TNIP1Q15025 636 aa16.31■□□□□ 0.2
SRPRA-202ENST00000527817 CIAPIN1Q6FI81 312 aa16.31■□□□□ 0.2
SRPRA-202ENST00000527817 SP8Q8IXZ3 490 aa16.31■□□□□ 0.2
SRPRA-202ENST00000527817 HIRAP54198 1017 aaPredicted RBP16.3■□□□□ 0.2
SRPRA-202ENST00000527817 CDC37L1Q7L3B6 337 aa16.3■□□□□ 0.2
SRPRA-202ENST00000527817 ERBB4Q15303 1308 aa16.29■□□□□ 0.2
SRPRA-202ENST00000527817 KIAA2012Q0VF49 1180 aa16.29■□□□□ 0.2
SRPRA-202ENST00000527817 MPNDQ8N594 471 aa16.29■□□□□ 0.2
SRPRA-202ENST00000527817 UTP14AQ9BVJ6 771 aaKnown RBP16.29■□□□□ 0.2
SRPRA-202ENST00000527817 LAMB4A4D0S4 1761 aa16.28■□□□□ 0.2
SRPRA-202ENST00000527817 NEFMP07197 916 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms