RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 RPGRQ92834 1020 aaKnown RBP25.03■■□□□ 1.6
CAPN1-211ENST00000527739 MRS2Q9HD23 443 aa25.03■■□□□ 1.6
CAPN1-211ENST00000527739 ABCC12Q96J65 1359 aa25.03■■□□□ 1.6
CAPN1-211ENST00000527739 SLX4Q8IY92 1834 aa25.02■■□□□ 1.6
CAPN1-211ENST00000527739 ELL2O00472 640 aaPredicted RBP25.02■■□□□ 1.6
CAPN1-211ENST00000527739 CCDC93Q567U6 631 aa25.02■■□□□ 1.6
CAPN1-211ENST00000527739 UTP14AQ9BVJ6 771 aaKnown RBP25.02■■□□□ 1.6
CAPN1-211ENST00000527739 IFT57Q9NWB7 429 aa25.02■■□□□ 1.6
CAPN1-211ENST00000527739 CACNA1SQ13698 1873 aa25.01■■□□□ 1.59
CAPN1-211ENST00000527739 HOXB7P09629 217 aa25.01■■□□□ 1.59
CAPN1-211ENST00000527739 HSP90AB3PQ58FF7 597 aa25.01■■□□□ 1.59
CAPN1-211ENST00000527739 NTSR2O95665 410 aa25■■□□□ 1.59
CAPN1-211ENST00000527739 ZNF853P0CG23 659 aa25■■□□□ 1.59
CAPN1-211ENST00000527739 DPY19L2Q6NUT2 758 aa25■■□□□ 1.59
CAPN1-211ENST00000527739 OLFM4Q6UX06 510 aa25■■□□□ 1.59
CAPN1-211ENST00000527739 C7orf43Q8WVR3 580 aa25■■□□□ 1.59
CAPN1-211ENST00000527739 DBF4Q9UBU7 674 aaPredicted RBP25■■□□□ 1.59
CAPN1-211ENST00000527739 DICER1Q9UPY3 1922 aaKnown RBP25■■□□□ 1.59
CAPN1-211ENST00000527739 COL13A1Q5TAT6 717 aaPredicted RBP24.99■■□□□ 1.59
CAPN1-211ENST00000527739 PCNTO95613 3336 aa24.99■■□□□ 1.59
CAPN1-211ENST00000527739 TCERG1O14776 1098 aaKnown RBP24.98■■□□□ 1.59
CAPN1-211ENST00000527739 ZNF428Q96B54 188 aa24.98■■□□□ 1.59
CAPN1-211ENST00000527739 RBM17Q96I25 401 aaKnown RBP24.98■■□□□ 1.59
CAPN1-211ENST00000527739 NLRP3Q96P20 1036 aa24.98■■□□□ 1.59
CAPN1-211ENST00000527739 LTBP3Q9NS15 1303 aa24.97■■□□□ 1.59
CAPN1-211ENST00000527739 TCIRG1Q13488 830 aa24.97■■□□□ 1.59
CAPN1-211ENST00000527739 CRY2Q49AN0 593 aa24.97■■□□□ 1.59
CAPN1-211ENST00000527739 RTKN2Q8IZC4 609 aa24.97■■□□□ 1.59
CAPN1-211ENST00000527739 HYPKQ9NX55 129 aa24.97■■□□□ 1.59
CAPN1-211ENST00000527739 IBTKQ9P2D0 1353 aaPredicted RBP24.96■■□□□ 1.59
CAPN1-211ENST00000527739 ARFGEF2Q9Y6D5 1785 aa24.96■■□□□ 1.59
CAPN1-211ENST00000527739 ANKRD13DQ6ZTN6 518 aa24.96■■□□□ 1.59
CAPN1-211ENST00000527739 NLRP10Q86W26 655 aa24.96■■□□□ 1.59
CAPN1-211ENST00000527739 TRMT112Q9UI30 125 aaKnown RBP24.96■■□□□ 1.59
CAPN1-211ENST00000527739 FKBP4Q02790 459 aaKnown RBP eCLIP24.95■■□□□ 1.58
CAPN1-211ENST00000527739 C3orf67Q6ZVT6 689 aa24.95■■□□□ 1.58
CAPN1-211ENST00000527739 PLBD2Q8NHP8 589 aa24.95■■□□□ 1.58
CAPN1-211ENST00000527739 ZNF277Q9NRM2 450 aaPredicted RBP24.95■■□□□ 1.58
CAPN1-211ENST00000527739 NUP98P52948 1817 aa24.95■■□□□ 1.58
CAPN1-211ENST00000527739 DDNO94850 711 aaPredicted RBP24.94■■□□□ 1.58
CAPN1-211ENST00000527739 POTEIP0CG38 1075 aa24.94■■□□□ 1.58
CAPN1-211ENST00000527739 POTEJP0CG39 1038 aa24.94■■□□□ 1.58
CAPN1-211ENST00000527739 HCLS1P14317 486 aaPredicted RBP24.93■■□□□ 1.58
CAPN1-211ENST00000527739 HOXA10P31260 410 aaPredicted RBP24.93■■□□□ 1.58
CAPN1-211ENST00000527739 SYNE4Q8N205 404 aa24.93■■□□□ 1.58
CAPN1-211ENST00000527739 C8orf58Q8NAV2 365 aa24.93■■□□□ 1.58
CAPN1-211ENST00000527739 SALL2Q9Y467 1007 aaPredicted RBP24.93■■□□□ 1.58
CAPN1-211ENST00000527739 SLC10A5Q5PT55 438 aa24.92■■□□□ 1.58
CAPN1-211ENST00000527739 ATP5J2-PTCD1G3V325 749 aa24.91■■□□□ 1.58
CAPN1-211ENST00000527739 RIC3Q7Z5B4 369 aa24.91■■□□□ 1.58
CAPN1-211ENST00000527739 TSR2Q969E8 191 aaKnown RBP24.91■■□□□ 1.58
CAPN1-211ENST00000527739 CRAMP1Q96RY5 1269 aa24.91■■□□□ 1.58
CAPN1-211ENST00000527739 TMX4Q9H1E5 349 aaPredicted RBP24.91■■□□□ 1.58
CAPN1-211ENST00000527739 SH3TC1Q8TE82 1336 aa24.9■■□□□ 1.58
CAPN1-211ENST00000527739 PPEF1O14829 653 aaPredicted RBP24.9■■□□□ 1.58
CAPN1-211ENST00000527739 GOLGA2Q08379 1002 aa24.9■■□□□ 1.58
CAPN1-211ENST00000527739 WWC1Q8IX03 1113 aa24.9■■□□□ 1.58
CAPN1-211ENST00000527739 CC2D2BQ6DHV5 1058 aa24.89■■□□□ 1.58
CAPN1-211ENST00000527739 PHAXQ9H814 394 aaKnown RBP24.89■■□□□ 1.58
CAPN1-211ENST00000527739 RNF123Q5XPI4 1314 aa24.88■■□□□ 1.57
CAPN1-211ENST00000527739 RIC1Q4ADV7 1423 aa24.88■■□□□ 1.57
CAPN1-211ENST00000527739 CCDC27Q2M243 656 aa24.88■■□□□ 1.57
CAPN1-211ENST00000527739 CCDC30Q5VVM6 783 aa24.88■■□□□ 1.57
CAPN1-211ENST00000527739 CHMP4AQ9BY43 222 aa24.88■■□□□ 1.57
CAPN1-211ENST00000527739 IARSP41252 1262 aaKnown RBP24.87■■□□□ 1.57
CAPN1-211ENST00000527739 RTL5Q5HYW3 569 aaPredicted RBP24.87■■□□□ 1.57
CAPN1-211ENST00000527739 CHADLQ6NUI6 762 aa24.87■■□□□ 1.57
CAPN1-211ENST00000527739 FAM9BQ8IZU0 186 aa24.87■■□□□ 1.57
CAPN1-211ENST00000527739 TSPYL6Q8N831 410 aa24.87■■□□□ 1.57
CAPN1-211ENST00000527739 HSPA1AP0DMV8 641 aaKnown RBP24.86■■□□□ 1.57
CAPN1-211ENST00000527739 HSPA1BP0DMV9 641 aaKnown RBP24.86■■□□□ 1.57
CAPN1-211ENST00000527739 FAM89AQ96GI7 184 aa24.86■■□□□ 1.57
CAPN1-211ENST00000527739 DDX46Q7L014 1031 aaKnown RBP24.85■■□□□ 1.57
CAPN1-211ENST00000527739 SLC51AQ86UW1 340 aa24.85■■□□□ 1.57
CAPN1-211ENST00000527739 JDP2Q8WYK2 163 aa24.85■■□□□ 1.57
CAPN1-211ENST00000527739 PSMD1Q99460 953 aa24.85■■□□□ 1.57
CAPN1-211ENST00000527739 ISCA1Q9BUE6 129 aa24.85■■□□□ 1.57
CAPN1-211ENST00000527739 ABCC4O15439 1325 aa24.84■■□□□ 1.57
CAPN1-211ENST00000527739 ZNF541Q9H0D2 1346 aa24.84■■□□□ 1.57
CAPN1-211ENST00000527739 GRIPAP1Q4V328 841 aa24.83■■□□□ 1.57
CAPN1-211ENST00000527739 MYD88Q99836 296 aa24.83■■□□□ 1.57
CAPN1-211ENST00000527739 BBOX1O75936 387 aa24.82■■□□□ 1.56
CAPN1-211ENST00000527739 DDX58O95786 925 aaKnown RBP24.82■■□□□ 1.56
CAPN1-211ENST00000527739 L3MBTL3Q96JM7 780 aaPredicted RBP24.82■■□□□ 1.56
CAPN1-211ENST00000527739 STK31Q9BXU1 1019 aa24.82■■□□□ 1.56
CAPN1-211ENST00000527739 ATP6V0A2Q9Y487 856 aa24.82■■□□□ 1.56
CAPN1-211ENST00000527739 CAPN15O75808 1086 aa24.81■■□□□ 1.56
CAPN1-211ENST00000527739 TNS4Q8IZW8 715 aa24.81■■□□□ 1.56
CAPN1-211ENST00000527739 LARGE2Q8N3Y3 721 aa24.81■■□□□ 1.56
CAPN1-211ENST00000527739 TAF1DQ9H5J8 278 aaPredicted RBP24.81■■□□□ 1.56
CAPN1-211ENST00000527739 MKRN1Q9UHC7 482 aaKnown RBP24.81■■□□□ 1.56
CAPN1-211ENST00000527739 TWISTNBQ3B726 338 aaPredicted RBP24.8■■□□□ 1.56
CAPN1-211ENST00000527739 CREBZFQ9NS37 354 aa24.8■■□□□ 1.56
CAPN1-211ENST00000527739 TRIM28Q13263 835 aaKnown RBP24.79■■□□□ 1.56
CAPN1-211ENST00000527739 GRAPQ13588 217 aa24.79■■□□□ 1.56
CAPN1-211ENST00000527739 GRAPLQ8TC17 118 aaPredicted RBP24.79■■□□□ 1.56
CAPN1-211ENST00000527739 IL16Q14005 1332 aa24.79■■□□□ 1.56
CAPN1-211ENST00000527739 SCN4AP35499 1836 aa24.78■■□□□ 1.56
CAPN1-211ENST00000527739 IQCA1LA6NCM1 817 aa24.78■■□□□ 1.56
CAPN1-211ENST00000527739 IRS4O14654 1257 aaPredicted RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 2732.1 ms