RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 PHAXQ9H814 394 aaKnown RBP33.99■■■■□ 3.03
TSPAN4-217ENST00000527644 RNF181Q9P0P0 153 aa33.99■■■■□ 3.03
TSPAN4-217ENST00000527644 SLX4Q8IY92 1834 aa33.99■■■■□ 3.03
TSPAN4-217ENST00000527644 ARFGEF2Q9Y6D5 1785 aa33.98■■■■□ 3.03
TSPAN4-217ENST00000527644 SLC10A5Q5PT55 438 aa33.98■■■■□ 3.03
TSPAN4-217ENST00000527644 FANCIQ9NVI1 1328 aa33.98■■■■□ 3.03
TSPAN4-217ENST00000527644 TNRC6CQ9HCJ0 1690 aaKnown RBP33.97■■■■□ 3.03
TSPAN4-217ENST00000527644 NFKBIEO00221 500 aa33.97■■■■□ 3.03
TSPAN4-217ENST00000527644 GOLGA2Q08379 1002 aa33.97■■■■□ 3.03
TSPAN4-217ENST00000527644 ZNF526Q8TF50 670 aaPredicted RBP33.97■■■■□ 3.03
TSPAN4-217ENST00000527644 SBF1O95248 1867 aa33.97■■■■□ 3.03
TSPAN4-217ENST00000527644 LMNB1P20700 586 aa33.96■■■■□ 3.03
TSPAN4-217ENST00000527644 C7orf43Q8WVR3 580 aa33.96■■■■□ 3.03
TSPAN4-217ENST00000527644 CCER2I3L3R5 266 aa33.95■■■■□ 3.03
TSPAN4-217ENST00000527644 RIC3Q7Z5B4 369 aa33.95■■■■□ 3.03
TSPAN4-217ENST00000527644 NLRP3Q96P20 1036 aa33.95■■■■□ 3.03
TSPAN4-217ENST00000527644 ISCA1Q9BUE6 129 aa33.95■■■■□ 3.03
TSPAN4-217ENST00000527644 TRMT112Q9UI30 125 aaKnown RBP33.95■■■■□ 3.03
TSPAN4-217ENST00000527644 RPGRQ92834 1020 aaKnown RBP33.94■■■■□ 3.02
TSPAN4-217ENST00000527644 STK31Q9BXU1 1019 aa33.94■■■■□ 3.02
TSPAN4-217ENST00000527644 CACNA1SQ13698 1873 aa33.94■■■■□ 3.02
TSPAN4-217ENST00000527644 HOXA10P31260 410 aaPredicted RBP33.93■■■■□ 3.02
TSPAN4-217ENST00000527644 TRIM28Q13263 835 aaKnown RBP33.92■■■■□ 3.02
TSPAN4-217ENST00000527644 SH3TC1Q8TE82 1336 aa33.92■■■■□ 3.02
TSPAN4-217ENST00000527644 LTBP3Q9NS15 1303 aa33.91■■■■□ 3.02
TSPAN4-217ENST00000527644 DDX58O95786 925 aaKnown RBP33.91■■■■□ 3.02
TSPAN4-217ENST00000527644 PRELPP51888 382 aa33.91■■■■□ 3.02
TSPAN4-217ENST00000527644 RBM17Q96I25 401 aaKnown RBP33.91■■■■□ 3.02
TSPAN4-217ENST00000527644 FER1L6Q2WGJ9 1857 aa33.9■■■■□ 3.02
TSPAN4-217ENST00000527644 ZC3H4Q9UPT8 1303 aaKnown RBP33.9■■■■□ 3.02
TSPAN4-217ENST00000527644 ATP5J2-PTCD1G3V325 749 aa33.9■■■■□ 3.02
TSPAN4-217ENST00000527644 CCDC93Q567U6 631 aa33.9■■■■□ 3.02
TSPAN4-217ENST00000527644 TAOK3Q9H2K8 898 aa33.9■■■■□ 3.02
TSPAN4-217ENST00000527644 MYH16Q9H6N6 1097 aa33.9■■■■□ 3.02
TSPAN4-217ENST00000527644 SPINK5Q9NQ38 1064 aaPredicted RBP33.9■■■■□ 3.02
TSPAN4-217ENST00000527644 C3orf67Q6ZVT6 689 aa33.89■■■■□ 3.02
TSPAN4-217ENST00000527644 CRAMP1Q96RY5 1269 aa33.89■■■■□ 3.02
TSPAN4-217ENST00000527644 EXOSC9Q06265 439 aaKnown RBP33.88■■■■□ 3.01
TSPAN4-217ENST00000527644 ZNF521Q96K83 1311 aa33.87■■■■□ 3.01
TSPAN4-217ENST00000527644 SYNE4Q8N205 404 aa33.87■■■■□ 3.01
TSPAN4-217ENST00000527644 TCERG1O14776 1098 aaKnown RBP33.86■■■■□ 3.01
TSPAN4-217ENST00000527644 VAMP4O75379 141 aa33.86■■■■□ 3.01
TSPAN4-217ENST00000527644 HCLS1P14317 486 aaPredicted RBP33.86■■■■□ 3.01
TSPAN4-217ENST00000527644 SLC4A2P04920 1241 aa33.85■■■■□ 3.01
TSPAN4-217ENST00000527644 RTKN2Q8IZC4 609 aa33.85■■■■□ 3.01
TSPAN4-217ENST00000527644 C1QTNF8P60827 252 aa33.84■■■■□ 3.01
TSPAN4-217ENST00000527644 MYD88Q99836 296 aa33.84■■■■□ 3.01
TSPAN4-217ENST00000527644 METTL22Q9BUU2 404 aaPredicted RBP33.84■■■■□ 3.01
TSPAN4-217ENST00000527644 CCDC88AQ3V6T2 1871 aa33.84■■■■□ 3.01
TSPAN4-217ENST00000527644 CC2D2BQ6DHV5 1058 aa33.83■■■■□ 3.01
TSPAN4-217ENST00000527644 KSR2Q6VAB6 950 aa33.83■■■■□ 3.01
TSPAN4-217ENST00000527644 ZNF428Q96B54 188 aa33.83■■■■□ 3.01
TSPAN4-217ENST00000527644 FAM89AQ96GI7 184 aa33.83■■■■□ 3.01
TSPAN4-217ENST00000527644 OLFM4Q6UX06 510 aa33.82■■■■□ 3
TSPAN4-217ENST00000527644 KDM2BQ8NHM5 1336 aa33.81■■■■□ 3
TSPAN4-217ENST00000527644 FKBP4Q02790 459 aaKnown RBP eCLIP33.81■■■■□ 33e-6■■■■■ 29.8
TSPAN4-217ENST00000527644 CCDC191Q8NCU4 936 aa33.81■■■■□ 3
TSPAN4-217ENST00000527644 MAP3K2Q9Y2U5 619 aa33.81■■■■□ 3
TSPAN4-217ENST00000527644 PI4KAP2A4QPH2 592 aa33.8■■■■□ 3
TSPAN4-217ENST00000527644 PI4KAP1Q8N8J0 262 aa33.8■■■■□ 3
TSPAN4-217ENST00000527644 KIF3CO14782 793 aa33.79■■■■□ 3
TSPAN4-217ENST00000527644 G2E3Q7L622 706 aa33.79■■■■□ 3
TSPAN4-217ENST00000527644 ZBTB38Q8NAP3 1195 aaPredicted RBP33.79■■■■□ 3
TSPAN4-217ENST00000527644 PPEF1O14829 653 aaPredicted RBP33.78■■■■□ 3
TSPAN4-217ENST00000527644 GRIPAP1Q4V328 841 aa33.78■■■■□ 3
TSPAN4-217ENST00000527644 DDX46Q7L014 1031 aaKnown RBP33.77■■■■□ 3
TSPAN4-217ENST00000527644 CWC25Q9NXE8 425 aaPredicted RBP33.77■■■■□ 3
TSPAN4-217ENST00000527644 LAMB2P55268 1798 aa33.77■■■■□ 3
TSPAN4-217ENST00000527644 DICER1Q9UPY3 1922 aaKnown RBP33.77■■■■□ 3
TSPAN4-217ENST00000527644 ABCC4O15439 1325 aa33.77■■■■□ 3
TSPAN4-217ENST00000527644 FLIIQ13045 1269 aa33.76■■■□□ 2.99
TSPAN4-217ENST00000527644 DIEXFQ68CQ4 756 aaKnown RBP33.76■■■□□ 2.99
TSPAN4-217ENST00000527644 NMRK2Q9NPI5 230 aa33.76■■■□□ 2.99
TSPAN4-217ENST00000527644 CACNA1FO60840 1977 aa33.76■■■□□ 2.99
TSPAN4-217ENST00000527644 GLTPD2A6NH11 291 aa33.75■■■□□ 2.99
TSPAN4-217ENST00000527644 IRS4O14654 1257 aaPredicted RBP33.75■■■□□ 2.99
TSPAN4-217ENST00000527644 BBOX1O75936 387 aa33.75■■■□□ 2.99
TSPAN4-217ENST00000527644 HSP90B1P14625 803 aaKnown RBP33.75■■■□□ 2.99
TSPAN4-217ENST00000527644 NEXNQ0ZGT2 675 aa33.75■■■□□ 2.99
TSPAN4-217ENST00000527644 RTL5Q5HYW3 569 aaPredicted RBP33.75■■■□□ 2.99
TSPAN4-217ENST00000527644 PSMD1Q99460 953 aa33.75■■■□□ 2.99
TSPAN4-217ENST00000527644 TIAM2Q8IVF5 1701 aa33.75■■■□□ 2.99
TSPAN4-217ENST00000527644 SNED1Q8TER0 1413 aa33.74■■■□□ 2.99
TSPAN4-217ENST00000527644 SF3B3Q15393 1217 aaKnown RBP33.74■■■□□ 2.99
TSPAN4-217ENST00000527644 TMX4Q9H1E5 349 aaPredicted RBP33.74■■■□□ 2.99
TSPAN4-217ENST00000527644 DDX60Q8IY21 1712 aaKnown RBP33.73■■■□□ 2.99
TSPAN4-217ENST00000527644 PCCAP05165 728 aaPredicted RBP33.73■■■□□ 2.99
TSPAN4-217ENST00000527644 ZNF277Q9NRM2 450 aaPredicted RBP33.73■■■□□ 2.99
TSPAN4-217ENST00000527644 ATP6V0A2Q9Y487 856 aa33.73■■■□□ 2.99
TSPAN4-217ENST00000527644 E9PSI1 815 aa33.72■■■□□ 2.99
TSPAN4-217ENST00000527644 DPY19L2Q6NUT2 758 aa33.72■■■□□ 2.99
TSPAN4-217ENST00000527644 IGKV5-2P06315 115 aa33.71■■■□□ 2.99
TSPAN4-217ENST00000527644 FKBP5Q13451 457 aaPredicted RBP33.71■■■□□ 2.99
TSPAN4-217ENST00000527644 GRAPQ13588 217 aa33.71■■■□□ 2.99
TSPAN4-217ENST00000527644 GRAPLQ8TC17 118 aaPredicted RBP33.71■■■□□ 2.99
TSPAN4-217ENST00000527644 IARSP41252 1262 aaKnown RBP33.69■■■□□ 2.98
TSPAN4-217ENST00000527644 RRAGCQ9HB90 399 aa33.69■■■□□ 2.98
TSPAN4-217ENST00000527644 SP8Q8IXZ3 490 aa33.68■■■□□ 2.98
TSPAN4-217ENST00000527644 SLFN5Q08AF3 891 aa33.67■■■□□ 2.98
TSPAN4-217ENST00000527644 TMC4Q7Z404 712 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms