RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 PRR5LQ6MZQ0 368 aa22.33■■□□□ 1.17
LTBP3-208ENST00000527339 CNBD1Q8NA66 436 aa22.33■■□□□ 1.17
LTBP3-208ENST00000527339 ZNF219Q9P2Y4 722 aaPredicted RBP22.33■■□□□ 1.17
LTBP3-208ENST00000527339 ARFGEF2Q9Y6D5 1785 aa22.33■■□□□ 1.16
LTBP3-208ENST00000527339 E9PSI1 815 aa22.32■■□□□ 1.16
LTBP3-208ENST00000527339 NBPF5PQ86XG9 351 aaPredicted RBP22.32■■□□□ 1.16
LTBP3-208ENST00000527339 NPHP1O15259 732 aa22.31■■□□□ 1.16
LTBP3-208ENST00000527339 C21orf2O43822 256 aa22.31■■□□□ 1.16
LTBP3-208ENST00000527339 ZNF622Q969S3 477 aaKnown RBP eCLIP22.31■■□□□ 1.16
LTBP3-208ENST00000527339 STK31Q9BXU1 1019 aa22.31■■□□□ 1.16
LTBP3-208ENST00000527339 FER1L6Q2WGJ9 1857 aa22.3■■□□□ 1.16
LTBP3-208ENST00000527339 VAMP4O75379 141 aa22.3■■□□□ 1.16
LTBP3-208ENST00000527339 ST5P78524 1137 aa22.3■■□□□ 1.16
LTBP3-208ENST00000527339 HSP90AB3PQ58FF7 597 aa22.3■■□□□ 1.16
LTBP3-208ENST00000527339 TPTE2Q6XPS3 522 aa22.3■■□□□ 1.16
LTBP3-208ENST00000527339 ANKRD13DQ6ZTN6 518 aa22.3■■□□□ 1.16
LTBP3-208ENST00000527339 ZNF34Q8IZ26 560 aa22.3■■□□□ 1.16
LTBP3-208ENST00000527339 PLBD2Q8NHP8 589 aa22.3■■□□□ 1.16
LTBP3-208ENST00000527339 BRIP1Q9BX63 1249 aa22.3■■□□□ 1.16
LTBP3-208ENST00000527339 IBTKQ9P2D0 1353 aaPredicted RBP22.29■■□□□ 1.16
LTBP3-208ENST00000527339 PHAXQ9H814 394 aaKnown RBP22.29■■□□□ 1.16
LTBP3-208ENST00000527339 SLX4Q8IY92 1834 aa22.29■■□□□ 1.16
LTBP3-208ENST00000527339 UBN2Q6ZU65 1347 aa22.29■■□□□ 1.16
LTBP3-208ENST00000527339 GPTP24298 496 aa22.28■■□□□ 1.16
LTBP3-208ENST00000527339 SLFN5Q08AF3 891 aa22.28■■□□□ 1.16
LTBP3-208ENST00000527339 PARP10Q53GL7 1025 aa22.28■■□□□ 1.16
LTBP3-208ENST00000527339 NYXQ9GZU5 481 aa22.28■■□□□ 1.16
LTBP3-208ENST00000527339 DICER1Q9UPY3 1922 aaKnown RBP22.27■■□□□ 1.16
LTBP3-208ENST00000527339 POTEIP0CG38 1075 aa22.27■■□□□ 1.16
LTBP3-208ENST00000527339 POTEJP0CG39 1038 aa22.27■■□□□ 1.16
LTBP3-208ENST00000527339 PDZRN3Q9UPQ7 1066 aa22.27■■□□□ 1.16
LTBP3-208ENST00000527339 FAM177BA6PVY3 158 aa22.26■■□□□ 1.15
LTBP3-208ENST00000527339 PDE6BP35913 854 aa22.26■■□□□ 1.15
LTBP3-208ENST00000527339 TCIRG1Q13488 830 aa22.26■■□□□ 1.15
LTBP3-208ENST00000527339 TCERG1O14776 1098 aaKnown RBP22.25■■□□□ 1.15
LTBP3-208ENST00000527339 CAPN15O75808 1086 aa22.25■■□□□ 1.15
LTBP3-208ENST00000527339 DDX58O95786 925 aaKnown RBP22.25■■□□□ 1.15
LTBP3-208ENST00000527339 ERFEQ4G0M1 354 aa22.25■■□□□ 1.15
LTBP3-208ENST00000527339 PPP1R42Q7Z4L9 355 aa22.25■■□□□ 1.15
LTBP3-208ENST00000527339 SLC4A2P04920 1241 aa22.24■■□□□ 1.15
LTBP3-208ENST00000527339 HSPA1AP0DMV8 641 aaKnown RBP22.24■■□□□ 1.15
LTBP3-208ENST00000527339 HSPA1BP0DMV9 641 aaKnown RBP22.24■■□□□ 1.15
LTBP3-208ENST00000527339 GTF2E1P29083 439 aaPredicted RBP22.24■■□□□ 1.15
LTBP3-208ENST00000527339 SUSD4Q5VX71 490 aa22.24■■□□□ 1.15
LTBP3-208ENST00000527339 RIC3Q7Z5B4 369 aa22.24■■□□□ 1.15
LTBP3-208ENST00000527339 CDCA7LQ96GN5 454 aa22.24■■□□□ 1.15
LTBP3-208ENST00000527339 CACNA1SQ13698 1873 aa22.24■■□□□ 1.15
LTBP3-208ENST00000527339 SRGNP10124 158 aa22.23■■□□□ 1.15
LTBP3-208ENST00000527339 HNRNPUQ00839 825 aaKnown RBP eCLIP22.23■■□□□ 1.15
LTBP3-208ENST00000527339 TRMT2AQ8IZ69 625 aaKnown RBP22.23■■□□□ 1.15
LTBP3-208ENST00000527339 RIC1Q4ADV7 1423 aa22.23■■□□□ 1.15
LTBP3-208ENST00000527339 DDNO94850 711 aaPredicted RBP22.22■■□□□ 1.15
LTBP3-208ENST00000527339 NTSR2O95665 410 aa22.22■■□□□ 1.15
LTBP3-208ENST00000527339 PRPF40BQ6NWY9 871 aaKnown RBP22.22■■□□□ 1.15
LTBP3-208ENST00000527339 NLRP10Q86W26 655 aa22.22■■□□□ 1.15
LTBP3-208ENST00000527339 RNF123Q5XPI4 1314 aa22.22■■□□□ 1.15
LTBP3-208ENST00000527339 LTBP3Q9NS15 1303 aa22.22■■□□□ 1.15
LTBP3-208ENST00000527339 DPY19L2Q6NUT2 758 aa22.21■■□□□ 1.15
LTBP3-208ENST00000527339 TNS4Q8IZW8 715 aa22.21■■□□□ 1.15
LTBP3-208ENST00000527339 C7orf43Q8WVR3 580 aa22.21■■□□□ 1.15
LTBP3-208ENST00000527339 ISCA1Q9BUE6 129 aa22.21■■□□□ 1.15
LTBP3-208ENST00000527339 UTP14AQ9BVJ6 771 aaKnown RBP22.21■■□□□ 1.15
LTBP3-208ENST00000527339 G2E3Q7L622 706 aa22.2■■□□□ 1.14
LTBP3-208ENST00000527339 NUTM1Q86Y26 1132 aa22.2■■□□□ 1.14
LTBP3-208ENST00000527339 TAOK3Q9H2K8 898 aa22.2■■□□□ 1.14
LTBP3-208ENST00000527339 ABCC12Q96J65 1359 aa22.2■■□□□ 1.14
LTBP3-208ENST00000527339 KLRG2A4D1S0 409 aaPredicted RBP22.19■■□□□ 1.14
LTBP3-208ENST00000527339 FLIIQ13045 1269 aa22.19■■□□□ 1.14
LTBP3-208ENST00000527339 TRIM28Q13263 835 aaKnown RBP22.19■■□□□ 1.14
LTBP3-208ENST00000527339 STYK1Q6J9G0 422 aa22.19■■□□□ 1.14
LTBP3-208ENST00000527339 OLFM4Q6UX06 510 aa22.19■■□□□ 1.14
LTBP3-208ENST00000527339 KSR2Q6VAB6 950 aa22.19■■□□□ 1.14
LTBP3-208ENST00000527339 METTL22Q9BUU2 404 aaPredicted RBP22.18■■□□□ 1.14
LTBP3-208ENST00000527339 PI4KAP2A4QPH2 592 aa22.17■■□□□ 1.14
LTBP3-208ENST00000527339 ATP5J2-PTCD1G3V325 749 aa22.17■■□□□ 1.14
LTBP3-208ENST00000527339 PI4KAP1Q8N8J0 262 aa22.17■■□□□ 1.14
LTBP3-208ENST00000527339 CNKSR1Q969H4 720 aa22.17■■□□□ 1.14
LTBP3-208ENST00000527339 ZNF428Q96B54 188 aa22.17■■□□□ 1.14
LTBP3-208ENST00000527339 MASTLQ96GX5 879 aa22.17■■□□□ 1.14
LTBP3-208ENST00000527339 MYD88Q99836 296 aa22.17■■□□□ 1.14
LTBP3-208ENST00000527339 TRMT112Q9UI30 125 aaKnown RBP22.17■■□□□ 1.14
LTBP3-208ENST00000527339 MAP3K2Q9Y2U5 619 aa22.17■■□□□ 1.14
LTBP3-208ENST00000527339 LAMB2P55268 1798 aa22.17■■□□□ 1.14
LTBP3-208ENST00000527339 FKBP5Q13451 457 aaPredicted RBP22.16■■□□□ 1.14
LTBP3-208ENST00000527339 CHADLQ6NUI6 762 aa22.16■■□□□ 1.14
LTBP3-208ENST00000527339 DDX60Q8IY21 1712 aaKnown RBP22.15■■□□□ 1.14
LTBP3-208ENST00000527339 SH3TC1Q8TE82 1336 aa22.15■■□□□ 1.14
LTBP3-208ENST00000527339 CT47B1P0C2W7 299 aaPredicted RBP22.15■■□□□ 1.14
LTBP3-208ENST00000527339 SLC10A5Q5PT55 438 aa22.15■■□□□ 1.14
LTBP3-208ENST00000527339 MKRN1Q9UHC7 482 aaKnown RBP22.15■■□□□ 1.14
LTBP3-208ENST00000527339 NPR1P16066 1061 aa22.14■■□□□ 1.13
LTBP3-208ENST00000527339 NEXNQ0ZGT2 675 aa22.14■■□□□ 1.13
LTBP3-208ENST00000527339 CRY2Q49AN0 593 aa22.14■■□□□ 1.13
LTBP3-208ENST00000527339 CCDC191Q8NCU4 936 aa22.14■■□□□ 1.13
LTBP3-208ENST00000527339 ZBED9Q6R2W3 1325 aa22.13■■□□□ 1.13
LTBP3-208ENST00000527339 CREBZFQ9NS37 354 aa22.13■■□□□ 1.13
LTBP3-208ENST00000527339 ZNF541Q9H0D2 1346 aa22.12■■□□□ 1.13
LTBP3-208ENST00000527339 NLRP3Q96P20 1036 aa22.12■■□□□ 1.13
LTBP3-208ENST00000527339 PASKQ96RG2 1323 aa22.11■■□□□ 1.13
LTBP3-208ENST00000527339 ALDH1L2Q3SY69 923 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms