RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 ERFEQ4G0M1 354 aa18.47■□□□□ 0.55
NXF1-204ENST00000527064 NLRP10Q86W26 655 aa18.47■□□□□ 0.55
NXF1-204ENST00000527064 CNKSR1Q969H4 720 aa18.47■□□□□ 0.55
NXF1-204ENST00000527064 NPR1P16066 1061 aa18.46■□□□□ 0.55
NXF1-204ENST00000527064 TNRC6CQ9HCJ0 1690 aaKnown RBP18.46■□□□□ 0.55
NXF1-204ENST00000527064 SLC4A2P04920 1241 aa18.45■□□□□ 0.54
NXF1-204ENST00000527064 ISCA1Q9BUE6 129 aa18.45■□□□□ 0.54
NXF1-204ENST00000527064 TCERG1O14776 1098 aaKnown RBP18.44■□□□□ 0.54
NXF1-204ENST00000527064 SLFN5Q08AF3 891 aa18.44■□□□□ 0.54
NXF1-204ENST00000527064 TRIM28Q13263 835 aaKnown RBP18.44■□□□□ 0.54
NXF1-204ENST00000527064 ARHGAP27Q6ZUM4 889 aa18.44■□□□□ 0.54
NXF1-204ENST00000527064 TRMT112Q9UI30 125 aaKnown RBP18.44■□□□□ 0.54
NXF1-204ENST00000527064 SH3TC1Q8TE82 1336 aa18.44■□□□□ 0.54
NXF1-204ENST00000527064 CACNA1FO60840 1977 aa18.43■□□□□ 0.54
NXF1-204ENST00000527064 CRY2Q49AN0 593 aa18.43■□□□□ 0.54
NXF1-204ENST00000527064 KSR2Q6VAB6 950 aa18.43■□□□□ 0.54
NXF1-204ENST00000527064 ATP5J2-PTCD1G3V325 749 aa18.42■□□□□ 0.54
NXF1-204ENST00000527064 NEXNQ0ZGT2 675 aa18.42■□□□□ 0.54
NXF1-204ENST00000527064 FLIIQ13045 1269 aa18.42■□□□□ 0.54
NXF1-204ENST00000527064 SOGA3Q5TF21 947 aa18.42■□□□□ 0.54
NXF1-204ENST00000527064 PRPF40BQ6NWY9 871 aaKnown RBP18.42■□□□□ 0.54
NXF1-204ENST00000527064 RPGRQ92834 1020 aaKnown RBP18.42■□□□□ 0.54
NXF1-204ENST00000527064 NLRP3Q96P20 1036 aa18.42■□□□□ 0.54
NXF1-204ENST00000527064 MYD88Q99836 296 aa18.42■□□□□ 0.54
NXF1-204ENST00000527064 METTL22Q9BUU2 404 aaPredicted RBP18.42■□□□□ 0.54
NXF1-204ENST00000527064 MAP3K2Q9Y2U5 619 aa18.42■□□□□ 0.54
NXF1-204ENST00000527064 PI4KAP2A4QPH2 592 aa18.41■□□□□ 0.54
NXF1-204ENST00000527064 ALDH1B1P30837 517 aa18.41■□□□□ 0.54
NXF1-204ENST00000527064 SLC10A5Q5PT55 438 aa18.41■□□□□ 0.54
NXF1-204ENST00000527064 PI4KAP1Q8N8J0 262 aa18.41■□□□□ 0.54
NXF1-204ENST00000527064 ADCY9O60503 1353 aa18.41■□□□□ 0.54
NXF1-204ENST00000527064 HSP90B1P14625 803 aaKnown RBP18.4■□□□□ 0.54
NXF1-204ENST00000527064 FKBP5Q13451 457 aaPredicted RBP18.4■□□□□ 0.54
NXF1-204ENST00000527064 CCDC191Q8NCU4 936 aa18.4■□□□□ 0.54
NXF1-204ENST00000527064 ZNF428Q96B54 188 aa18.4■□□□□ 0.54
NXF1-204ENST00000527064 RBM17Q96I25 401 aaKnown RBP18.4■□□□□ 0.54
NXF1-204ENST00000527064 G2E3Q7L622 706 aa18.39■□□□□ 0.53
NXF1-204ENST00000527064 CWC25Q9NXE8 425 aaPredicted RBP18.39■□□□□ 0.53
NXF1-204ENST00000527064 CACNA1SQ13698 1873 aa18.39■□□□□ 0.53
NXF1-204ENST00000527064 C21orf2O43822 256 aa18.38■□□□□ 0.53
NXF1-204ENST00000527064 HOXA10P31260 410 aaPredicted RBP18.38■□□□□ 0.53
NXF1-204ENST00000527064 ZBTB38Q8NAP3 1195 aaPredicted RBP18.38■□□□□ 0.53
NXF1-204ENST00000527064 CDCA7LQ96GN5 454 aa18.38■□□□□ 0.53
NXF1-204ENST00000527064 LAMB2P55268 1798 aa18.37■□□□□ 0.53
NXF1-204ENST00000527064 CT47B1P0C2W7 299 aaPredicted RBP18.37■□□□□ 0.53
NXF1-204ENST00000527064 HCLS1P14317 486 aaPredicted RBP18.37■□□□□ 0.53
NXF1-204ENST00000527064 HNRNPUQ00839 825 aaKnown RBP eCLIP18.37■□□□□ 0.53
NXF1-204ENST00000527064 TRMT2AQ8IZ69 625 aaKnown RBP18.37■□□□□ 0.53
NXF1-204ENST00000527064 SLX4Q8IY92 1834 aa18.37■□□□□ 0.53
NXF1-204ENST00000527064 DDX60Q8IY21 1712 aaKnown RBP18.36■□□□□ 0.53
NXF1-204ENST00000527064 DNAAF4Q8WXU2 420 aa18.36■□□□□ 0.53
NXF1-204ENST00000527064 FAM89AQ96GI7 184 aa18.36■□□□□ 0.53
NXF1-204ENST00000527064 CRAMP1Q96RY5 1269 aa18.36■□□□□ 0.53
NXF1-204ENST00000527064 ZNF219Q9P2Y4 722 aaPredicted RBP18.36■□□□□ 0.53
NXF1-204ENST00000527064 PCCAP05165 728 aaPredicted RBP18.35■□□□□ 0.53
NXF1-204ENST00000527064 CCDC93Q567U6 631 aa18.35■□□□□ 0.53
NXF1-204ENST00000527064 C3orf67Q6ZVT6 689 aa18.35■□□□□ 0.53
NXF1-204ENST00000527064 IRS4O14654 1257 aaPredicted RBP18.34■□□□□ 0.53
NXF1-204ENST00000527064 IGKV5-2P06315 115 aa18.34■□□□□ 0.53
NXF1-204ENST00000527064 C9orf131Q5VYM1 1079 aa18.34■□□□□ 0.53
NXF1-204ENST00000527064 DDX46Q7L014 1031 aaKnown RBP18.34■□□□□ 0.53
NXF1-204ENST00000527064 SYNE4Q8N205 404 aa18.34■□□□□ 0.53
NXF1-204ENST00000527064 ZNF784Q8NCA9 323 aaPredicted RBP18.34■□□□□ 0.53
NXF1-204ENST00000527064 TAOK3Q9H2K8 898 aa18.34■□□□□ 0.53
NXF1-204ENST00000527064 LTBP3Q9NS15 1303 aa18.33■□□□□ 0.53
NXF1-204ENST00000527064 NEURL1BA8MQ27 555 aa18.33■□□□□ 0.52
NXF1-204ENST00000527064 PPEF1O14829 653 aaPredicted RBP18.33■□□□□ 0.52
NXF1-204ENST00000527064 LMNB1P20700 586 aa18.33■□□□□ 0.52
NXF1-204ENST00000527064 RASSF7Q02833 373 aa18.33■□□□□ 0.52
NXF1-204ENST00000527064 ALDH1L2Q3SY69 923 aa18.33■□□□□ 0.52
NXF1-204ENST00000527064 CC2D2BQ6DHV5 1058 aa18.33■□□□□ 0.52
NXF1-204ENST00000527064 RTKN2Q8IZC4 609 aa18.33■□□□□ 0.52
NXF1-204ENST00000527064 C7orf43Q8WVR3 580 aa18.33■□□□□ 0.52
NXF1-204ENST00000527064 TMX4Q9H1E5 349 aaPredicted RBP18.33■□□□□ 0.52
NXF1-204ENST00000527064 RNF181Q9P0P0 153 aa18.33■□□□□ 0.52
NXF1-204ENST00000527064 FER1L6Q2WGJ9 1857 aa18.33■□□□□ 0.52
NXF1-204ENST00000527064 ABCC4O15439 1325 aa18.32■□□□□ 0.52
NXF1-204ENST00000527064 CDHR2Q9BYE9 1310 aa18.32■□□□□ 0.52
NXF1-204ENST00000527064 ZC3H4Q9UPT8 1303 aaKnown RBP18.32■□□□□ 0.52
NXF1-204ENST00000527064 NFKBIEO00221 500 aa18.32■□□□□ 0.52
NXF1-204ENST00000527064 CWF19L2Q2TBE0 894 aaKnown RBP18.32■□□□□ 0.52
NXF1-204ENST00000527064 GRIPAP1Q4V328 841 aa18.32■□□□□ 0.52
NXF1-204ENST00000527064 RTL5Q5HYW3 569 aaPredicted RBP18.32■□□□□ 0.52
NXF1-204ENST00000527064 LINS1Q8NG48 757 aa18.32■□□□□ 0.52
NXF1-204ENST00000527064 PTPRCP08575 1304 aa18.31■□□□□ 0.52
NXF1-204ENST00000527064 SF3B3Q15393 1217 aaKnown RBP18.31■□□□□ 0.52
NXF1-204ENST00000527064 MRPL50Q8N5N7 158 aaKnown RBP18.31■□□□□ 0.52
NXF1-204ENST00000527064 ZBED9Q6R2W3 1325 aa18.3■□□□□ 0.52
NXF1-204ENST00000527064 PDE8AO60658 829 aa18.3■□□□□ 0.52
NXF1-204ENST00000527064 GRAPQ13588 217 aa18.3■□□□□ 0.52
NXF1-204ENST00000527064 TMC4Q7Z404 712 aa18.3■□□□□ 0.52
NXF1-204ENST00000527064 GRAPLQ8TC17 118 aaPredicted RBP18.3■□□□□ 0.52
NXF1-204ENST00000527064 SSH1Q8WYL5 1049 aa18.3■□□□□ 0.52
NXF1-204ENST00000527064 SBF1O95248 1867 aa18.3■□□□□ 0.52
NXF1-204ENST00000527064 F6X3S4 739 aa18.29■□□□□ 0.52
NXF1-204ENST00000527064 BBOX1O75936 387 aa18.29■□□□□ 0.52
NXF1-204ENST00000527064 FKBP4Q02790 459 aaKnown RBP eCLIP18.29■□□□□ 0.52
NXF1-204ENST00000527064 GCKRQ14397 625 aa18.29■□□□□ 0.52
NXF1-204ENST00000527064 CCDC152Q4G0S7 254 aa18.29■□□□□ 0.52
NXF1-204ENST00000527064 SMC4Q9NTJ3 1288 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms