RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 NUTM1Q86Y26 1132 aa13.72□□□□□ -0.21
NEDD8-205ENST00000527046 CCDC191Q8NCU4 936 aa13.72□□□□□ -0.21
NEDD8-205ENST00000527046 C10orf71Q711Q0 1435 aa13.72□□□□□ -0.21
NEDD8-205ENST00000527046 RNF123Q5XPI4 1314 aa13.71□□□□□ -0.21
NEDD8-205ENST00000527046 KCNA3P22001 575 aa13.71□□□□□ -0.21
NEDD8-205ENST00000527046 POLD1P28340 1107 aa13.71□□□□□ -0.21
NEDD8-205ENST00000527046 GCKRQ14397 625 aa13.71□□□□□ -0.21
NEDD8-205ENST00000527046 ZKSCAN2Q63HK3 967 aa13.71□□□□□ -0.21
NEDD8-205ENST00000527046 INTS3Q68E01 1043 aaKnown RBP13.71□□□□□ -0.21
NEDD8-205ENST00000527046 FRAT1Q92837 279 aaPredicted RBP13.71□□□□□ -0.21
NEDD8-205ENST00000527046 ABCC12Q96J65 1359 aa13.71□□□□□ -0.22
NEDD8-205ENST00000527046 IBTKQ9P2D0 1353 aaPredicted RBP13.71□□□□□ -0.22
NEDD8-205ENST00000527046 KIF16BQ96L93 1317 aa13.7□□□□□ -0.22
NEDD8-205ENST00000527046 PCCAP05165 728 aaPredicted RBP13.7□□□□□ -0.22
NEDD8-205ENST00000527046 C20orf194Q5TEA3 1177 aa13.7□□□□□ -0.22
NEDD8-205ENST00000527046 TPTE2Q6XPS3 522 aa13.7□□□□□ -0.22
NEDD8-205ENST00000527046 FAM89AQ96GI7 184 aa13.7□□□□□ -0.22
NEDD8-205ENST00000527046 KAZALD1Q96I82 304 aa13.7□□□□□ -0.22
NEDD8-205ENST00000527046 UTP14AQ9BVJ6 771 aaKnown RBP13.7□□□□□ -0.22
NEDD8-205ENST00000527046 API5Q9BZZ5 524 aaKnown RBP13.7□□□□□ -0.22
NEDD8-205ENST00000527046 USP44Q9H0E7 712 aa13.7□□□□□ -0.22
NEDD8-205ENST00000527046 N4BP2Q86UW6 1770 aaPredicted RBP13.7□□□□□ -0.22
NEDD8-205ENST00000527046 DDX60Q8IY21 1712 aaKnown RBP13.7□□□□□ -0.22
NEDD8-205ENST00000527046 UTYO14607 1347 aa13.69□□□□□ -0.22
NEDD8-205ENST00000527046 PXDNLA1KZ92 1463 aa13.69□□□□□ -0.22
NEDD8-205ENST00000527046 ALDH1L1O75891 902 aa13.69□□□□□ -0.22
NEDD8-205ENST00000527046 SLC4A10Q6U841 1118 aa13.69□□□□□ -0.22
NEDD8-205ENST00000527046 NBPF5PQ86XG9 351 aaPredicted RBP13.69□□□□□ -0.22
NEDD8-205ENST00000527046 ZBTB38Q8NAP3 1195 aaPredicted RBP13.69□□□□□ -0.22
NEDD8-205ENST00000527046 CLUAP1Q96AJ1 413 aa13.69□□□□□ -0.22
NEDD8-205ENST00000527046 SYT17Q9BSW7 474 aa13.69□□□□□ -0.22
NEDD8-205ENST00000527046 FHDC1Q9C0D6 1143 aaPredicted RBP13.69□□□□□ -0.22
NEDD8-205ENST00000527046 CWC25Q9NXE8 425 aaPredicted RBP13.69□□□□□ -0.22
NEDD8-205ENST00000527046 TRMT112Q9UI30 125 aaKnown RBP13.69□□□□□ -0.22
NEDD8-205ENST00000527046 CD2APQ9Y5K6 639 aa13.69□□□□□ -0.22
NEDD8-205ENST00000527046 TNRC6CQ9HCJ0 1690 aaKnown RBP13.69□□□□□ -0.22
NEDD8-205ENST00000527046 IPO8O15397 1037 aaKnown RBP13.68□□□□□ -0.22
NEDD8-205ENST00000527046 NBPF7P0C2Y1 421 aaPredicted RBP13.68□□□□□ -0.22
NEDD8-205ENST00000527046 HCLS1P14317 486 aaPredicted RBP13.68□□□□□ -0.22
NEDD8-205ENST00000527046 RTL5Q5HYW3 569 aaPredicted RBP13.68□□□□□ -0.22
NEDD8-205ENST00000527046 PPP1R42Q7Z4L9 355 aa13.68□□□□□ -0.22
NEDD8-205ENST00000527046 TMEM57Q8N5G2 664 aa13.68□□□□□ -0.22
NEDD8-205ENST00000527046 CNBD1Q8NA66 436 aa13.68□□□□□ -0.22
NEDD8-205ENST00000527046 NLGN2Q8NFZ4 835 aa13.68□□□□□ -0.22
NEDD8-205ENST00000527046 BRIP1Q9BX63 1249 aa13.68□□□□□ -0.22
NEDD8-205ENST00000527046 SRCIN1Q9C0H9 1055 aa13.68□□□□□ -0.22
NEDD8-205ENST00000527046 LAMB2P55268 1798 aa13.68□□□□□ -0.22
NEDD8-205ENST00000527046 RIC1Q4ADV7 1423 aa13.67□□□□□ -0.22
NEDD8-205ENST00000527046 COL4A1P02462 1669 aa13.67□□□□□ -0.22
NEDD8-205ENST00000527046 NEXNQ0ZGT2 675 aa13.67□□□□□ -0.22
NEDD8-205ENST00000527046 EPHA10Q5JZY3 1008 aa13.67□□□□□ -0.22
NEDD8-205ENST00000527046 PANK1Q8TE04 598 aa13.67□□□□□ -0.22
NEDD8-205ENST00000527046 NYXQ9GZU5 481 aa13.67□□□□□ -0.22
NEDD8-205ENST00000527046 SH3TC1Q8TE82 1336 aa13.66□□□□□ -0.22
NEDD8-205ENST00000527046 CDHR2Q9BYE9 1310 aa13.66□□□□□ -0.22
NEDD8-205ENST00000527046 DPEP1P16444 411 aa13.66□□□□□ -0.22
NEDD8-205ENST00000527046 CHRNA5P30532 468 aa13.66□□□□□ -0.22
NEDD8-205ENST00000527046 FOXO4P98177 505 aa13.66□□□□□ -0.22
NEDD8-205ENST00000527046 CRY2Q49AN0 593 aa13.66□□□□□ -0.22
NEDD8-205ENST00000527046 PLA2G12BQ9BX93 195 aa13.66□□□□□ -0.22
NEDD8-205ENST00000527046 COL11A2P13942 1736 aaPredicted RBP13.65□□□□□ -0.22
NEDD8-205ENST00000527046 A0A0G2JLW4 131 aa13.65□□□□□ -0.22
NEDD8-205ENST00000527046 GRM8O00222 908 aa13.65□□□□□ -0.22
NEDD8-205ENST00000527046 IRS4O14654 1257 aaPredicted RBP13.65□□□□□ -0.22
NEDD8-205ENST00000527046 ZBTB7BO15156 539 aaPredicted RBP13.65□□□□□ -0.22
NEDD8-205ENST00000527046 SRGNP10124 158 aa13.65□□□□□ -0.22
NEDD8-205ENST00000527046 CCT4P50991 539 aaKnown RBP13.65□□□□□ -0.22
NEDD8-205ENST00000527046 TGFB2P61812 414 aa13.65□□□□□ -0.22
NEDD8-205ENST00000527046 UBE3BQ7Z3V4 1068 aa13.65□□□□□ -0.22
NEDD8-205ENST00000527046 DZIP1LQ8IYY4 767 aaKnown RBP13.65□□□□□ -0.22
NEDD8-205ENST00000527046 TAF1P21675 1872 aa13.64□□□□□ -0.23
NEDD8-205ENST00000527046 BRCA1P38398 1863 aaKnown RBP13.64□□□□□ -0.23
NEDD8-205ENST00000527046 CSF1RP07333 972 aa13.64□□□□□ -0.23
NEDD8-205ENST00000527046 SF3B3Q15393 1217 aaKnown RBP13.64□□□□□ -0.23
NEDD8-205ENST00000527046 SUCLG2Q96I99 432 aa13.64□□□□□ -0.23
NEDD8-205ENST00000527046 MEIS3Q99687 375 aa13.64□□□□□ -0.23
NEDD8-205ENST00000527046 HOXA10P31260 410 aaPredicted RBP13.63□□□□□ -0.23
NEDD8-205ENST00000527046 RRP1P56182 461 aaKnown RBP13.63□□□□□ -0.23
NEDD8-205ENST00000527046 PDE3AQ14432 1141 aa13.63□□□□□ -0.23
NEDD8-205ENST00000527046 SLC51AQ86UW1 340 aa13.63□□□□□ -0.23
NEDD8-205ENST00000527046 TTLL11Q8NHH1 800 aa13.63□□□□□ -0.23
NEDD8-205ENST00000527046 SUPT16HQ9Y5B9 1047 aaKnown RBP13.63□□□□□ -0.23
NEDD8-205ENST00000527046 DLEC1Q9Y238 1755 aa13.63□□□□□ -0.23
NEDD8-205ENST00000527046 PDE8AO60658 829 aa13.62□□□□□ -0.23
NEDD8-205ENST00000527046 ST5P78524 1137 aa13.62□□□□□ -0.23
NEDD8-205ENST00000527046 C2CD5Q86YS7 1000 aa13.62□□□□□ -0.23
NEDD8-205ENST00000527046 ANKRD44Q8N8A2 993 aa13.62□□□□□ -0.23
NEDD8-205ENST00000527046 GTF2E1P29083 439 aaPredicted RBP13.61□□□□□ -0.23
NEDD8-205ENST00000527046 PDE6BP35913 854 aa13.61□□□□□ -0.23
NEDD8-205ENST00000527046 RABL6Q3YEC7 729 aaPredicted RBP13.61□□□□□ -0.23
NEDD8-205ENST00000527046 C7orf43Q8WVR3 580 aa13.61□□□□□ -0.23
NEDD8-205ENST00000527046 NLRP3Q96P20 1036 aa13.61□□□□□ -0.23
NEDD8-205ENST00000527046 C9orf78Q9NZ63 289 aaPredicted RBP13.61□□□□□ -0.23
NEDD8-205ENST00000527046 PPP1R1BQ9UD71 204 aaPredicted RBP13.61□□□□□ -0.23
NEDD8-205ENST00000527046 COG6Q9Y2V7 657 aa13.61□□□□□ -0.23
NEDD8-205ENST00000527046 SLX4Q8IY92 1834 aa13.6□□□□□ -0.23
NEDD8-205ENST00000527046 MVPQ14764 893 aaKnown RBP13.6□□□□□ -0.23
NEDD8-205ENST00000527046 KLHL34Q8N239 644 aa13.6□□□□□ -0.23
NEDD8-205ENST00000527046 SEC31BQ9NQW1 1179 aa13.6□□□□□ -0.23
NEDD8-205ENST00000527046 MYH3P11055 1940 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms