RNA–Protein interactions for RNA: ENST00000526938.5

CTNND1-215, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-215ENST00000526938 KIF6Q6ZMV9 814 aa10.37□□□□□ -0.75
CTNND1-215ENST00000526938 NECAB1Q8N987 351 aa10.37□□□□□ -0.75
CTNND1-215ENST00000526938 PDRG1Q9NUG6 133 aa10.37□□□□□ -0.75
CTNND1-215ENST00000526938 NFAT5O94916 1531 aa10.37□□□□□ -0.75
CTNND1-215ENST00000526938 GOLIM4O00461 696 aa10.37□□□□□ -0.75
CTNND1-215ENST00000526938 CCDC129Q6ZRS4 1044 aa10.37□□□□□ -0.75
CTNND1-215ENST00000526938 SNX14Q9Y5W7 946 aa10.37□□□□□ -0.75
CTNND1-215ENST00000526938 TTC41PQ6P2S7 1318 aa10.36□□□□□ -0.75
CTNND1-215ENST00000526938 SALL3Q9BXA9 1300 aa10.36□□□□□ -0.75
CTNND1-215ENST00000526938 STARD3NLO95772 234 aa10.36□□□□□ -0.75
CTNND1-215ENST00000526938 MCM2P49736 904 aa10.36□□□□□ -0.75
CTNND1-215ENST00000526938 SKOR2Q2VWA4 1001 aaPredicted RBP10.36□□□□□ -0.75
CTNND1-215ENST00000526938 SLFNL1Q499Z3 407 aa10.36□□□□□ -0.75
CTNND1-215ENST00000526938 RBM27Q9P2N5 1060 aaKnown RBP10.36□□□□□ -0.75
CTNND1-215ENST00000526938 RBM8AQ9Y5S9 174 aaKnown RBP10.36□□□□□ -0.75
CTNND1-215ENST00000526938 CYP46A1Q9Y6A2 500 aa10.36□□□□□ -0.75
CTNND1-215ENST00000526938 AK2P54819 239 aa10.36□□□□□ -0.75
CTNND1-215ENST00000526938 TRIM44Q96DX7 344 aaPredicted RBP10.36□□□□□ -0.75
CTNND1-215ENST00000526938 CEP126Q9P2H0 1117 aa10.36□□□□□ -0.75
CTNND1-215ENST00000526938 KDM6AO15550 1401 aaPredicted RBP10.36□□□□□ -0.75
CTNND1-215ENST00000526938 XRCC6P12956 609 aaKnown RBP eCLIP10.35□□□□□ -0.752e-8■□□□□ 8.5
CTNND1-215ENST00000526938 WASHC4Q2M389 1173 aa10.35□□□□□ -0.75
CTNND1-215ENST00000526938 SYNE4Q8N205 404 aa10.35□□□□□ -0.75
CTNND1-215ENST00000526938 SEC62Q99442 399 aaKnown RBP10.35□□□□□ -0.75
CTNND1-215ENST00000526938 HSPA4P34932 840 aa10.35□□□□□ -0.75
CTNND1-215ENST00000526938 PRIM1P49642 420 aaKnown RBP10.35□□□□□ -0.75
CTNND1-215ENST00000526938 ADCK5Q3MIX3 580 aa10.35□□□□□ -0.75
CTNND1-215ENST00000526938 CARD10Q9BWT7 1032 aa10.35□□□□□ -0.75
CTNND1-215ENST00000526938 LRRC2Q9BYS8 371 aa10.35□□□□□ -0.75
CTNND1-215ENST00000526938 CHD2O14647 1828 aaKnown RBP10.35□□□□□ -0.75
CTNND1-215ENST00000526938 A0A0D9SFI3 127 aa10.35□□□□□ -0.75
CTNND1-215ENST00000526938 PTPN12Q05209 780 aaKnown RBP10.35□□□□□ -0.75
CTNND1-215ENST00000526938 LRRC24Q50LG9 513 aa10.35□□□□□ -0.75
CTNND1-215ENST00000526938 TNNI3KQ59H18 835 aa10.35□□□□□ -0.75
CTNND1-215ENST00000526938 PIGBQ92521 554 aa10.35□□□□□ -0.75
CTNND1-215ENST00000526938 PUS3Q9BZE2 481 aaKnown RBP10.35□□□□□ -0.75
CTNND1-215ENST00000526938 DBNLQ9UJU6 430 aaKnown RBP10.35□□□□□ -0.75
CTNND1-215ENST00000526938 FPGT-TNNI3KV9GXZ4 949 aa10.35□□□□□ -0.75
CTNND1-215ENST00000526938 PLCB2Q00722 1185 aa10.34□□□□□ -0.75
CTNND1-215ENST00000526938 MTX1Q13505 466 aa10.34□□□□□ -0.75
CTNND1-215ENST00000526938 RNF20Q5VTR2 975 aa10.34□□□□□ -0.75
CTNND1-215ENST00000526938 FERMT3Q86UX7 667 aa10.34□□□□□ -0.75
CTNND1-215ENST00000526938 RNF214Q8ND24 703 aa10.34□□□□□ -0.75
CTNND1-215ENST00000526938 ERVV-2B6SEH9 535 aa10.34□□□□□ -0.75
CTNND1-215ENST00000526938 LSG1Q9H089 658 aaKnown RBP10.34□□□□□ -0.75
CTNND1-215ENST00000526938 RAD50Q92878 1312 aa10.34□□□□□ -0.75
CTNND1-215ENST00000526938 FIBPO43427 364 aa10.34□□□□□ -0.75
CTNND1-215ENST00000526938 ANAPC15P60006 121 aa10.34□□□□□ -0.75
CTNND1-215ENST00000526938 HSP90AB3PQ58FF7 597 aa10.34□□□□□ -0.75
CTNND1-215ENST00000526938 BLOC1S2Q6QNY1 142 aa10.34□□□□□ -0.75
CTNND1-215ENST00000526938 GRPEL1Q9HAV7 217 aa10.34□□□□□ -0.75
CTNND1-215ENST00000526938 CNNM1Q9NRU3 951 aa10.34□□□□□ -0.75
CTNND1-215ENST00000526938 NCAPD2Q15021 1401 aa10.33□□□□□ -0.76
CTNND1-215ENST00000526938 RGPD1P0DJD0 1748 aa10.33□□□□□ -0.76
CTNND1-215ENST00000526938 TRMT112Q9UI30 125 aaKnown RBP10.33□□□□□ -0.76
CTNND1-215ENST00000526938 LIMCH1Q9UPQ0 1083 aa10.33□□□□□ -0.76
CTNND1-215ENST00000526938 AOX1Q06278 1338 aa10.33□□□□□ -0.76
CTNND1-215ENST00000526938 IFIT1P09914 478 aaKnown RBP10.33□□□□□ -0.76
CTNND1-215ENST00000526938 HEG1Q9ULI3 1381 aa10.33□□□□□ -0.76
CTNND1-215ENST00000526938 HIP1O00291 1037 aa10.32□□□□□ -0.76
CTNND1-215ENST00000526938 CREB3L3Q68CJ9 461 aa10.32□□□□□ -0.76
CTNND1-215ENST00000526938 HELBQ8NG08 1087 aaPredicted RBP10.32□□□□□ -0.76
CTNND1-215ENST00000526938 IFIT5Q13325 482 aaKnown RBP10.32□□□□□ -0.76
CTNND1-215ENST00000526938 ZNF589Q86UQ0 364 aaPredicted RBP10.32□□□□□ -0.76
CTNND1-215ENST00000526938 ZMYND15Q9H091 742 aa10.32□□□□□ -0.76
CTNND1-215ENST00000526938 CCDC171Q6TFL3 1326 aa10.32□□□□□ -0.76
CTNND1-215ENST00000526938 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.32□□□□□ -0.76
CTNND1-215ENST00000526938 PTMSP20962 102 aa10.32□□□□□ -0.76
CTNND1-215ENST00000526938 MRE11P49959 708 aa10.32□□□□□ -0.76
CTNND1-215ENST00000526938 TTC39AQ5SRH9 613 aa10.32□□□□□ -0.76
CTNND1-215ENST00000526938 GAS2L3Q86XJ1 694 aa10.32□□□□□ -0.76
CTNND1-215ENST00000526938 LTN1O94822 1766 aa10.32□□□□□ -0.76
CTNND1-215ENST00000526938 NPHP1O15259 732 aa10.31□□□□□ -0.76
CTNND1-215ENST00000526938 APPP05067 770 aa10.31□□□□□ -0.76
CTNND1-215ENST00000526938 DDIT3P35638 169 aa10.31□□□□□ -0.76
CTNND1-215ENST00000526938 METTL24Q5JXM2 366 aa10.31□□□□□ -0.76
CTNND1-215ENST00000526938 LDHAL6AQ6ZMR3 332 aa10.31□□□□□ -0.76
CTNND1-215ENST00000526938 COPRSQ9NQ92 184 aa10.31□□□□□ -0.76
CTNND1-215ENST00000526938 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-215ENST00000526938 SOS2Q07890 1332 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-215ENST00000526938 KDM4AO75164 1064 aa10.31□□□□□ -0.76
CTNND1-215ENST00000526938 PSMA5P28066 241 aa10.31□□□□□ -0.76
CTNND1-215ENST00000526938 GTF2E1P29083 439 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-215ENST00000526938 KCNQ4P56696 695 aa10.31□□□□□ -0.76
CTNND1-215ENST00000526938 BICDL1Q6ZP65 573 aa10.31□□□□□ -0.76
CTNND1-215ENST00000526938 DDX11Q96FC9 970 aa10.31□□□□□ -0.76
CTNND1-215ENST00000526938 A0A1B0GUL7 405 aa10.31□□□□□ -0.76
CTNND1-215ENST00000526938 CCDC158Q5M9N0 1113 aa10.31□□□□□ -0.76
CTNND1-215ENST00000526938 CHST3Q7LGC8 479 aa10.31□□□□□ -0.76
CTNND1-215ENST00000526938 ADAMTSL3P82987 1691 aa10.3□□□□□ -0.76
CTNND1-215ENST00000526938 SYCE3A1L190 88 aa10.3□□□□□ -0.76
CTNND1-215ENST00000526938 LARGE1O95461 756 aa10.3□□□□□ -0.76
CTNND1-215ENST00000526938 HAND2P61296 217 aa10.3□□□□□ -0.76
CTNND1-215ENST00000526938 RUFY3Q7L099 469 aa10.3□□□□□ -0.76
CTNND1-215ENST00000526938 STK11IPQ8N1F8 1099 aa10.3□□□□□ -0.76
CTNND1-215ENST00000526938 ZBTB1Q9Y2K1 713 aa10.3□□□□□ -0.76
CTNND1-215ENST00000526938 ZDHHC9Q9Y397 364 aa10.3□□□□□ -0.76
CTNND1-215ENST00000526938 GJB2P29033 226 aa10.3□□□□□ -0.76
CTNND1-215ENST00000526938 HLFQ16534 295 aa10.3□□□□□ -0.76
CTNND1-215ENST00000526938 LARP1BQ659C4 914 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms