RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 IER5Q5VY09 327 aa11.03□□□□□ -0.64
COPB1-204ENST00000526191 MYO19Q96H55 970 aa11.03□□□□□ -0.64
COPB1-204ENST00000526191 BTBD6Q96KE9 485 aa11.03□□□□□ -0.64
COPB1-204ENST00000526191 RRAGCQ9HB90 399 aa11.03□□□□□ -0.64
COPB1-204ENST00000526191 SLAIN2Q9P270 581 aa11.03□□□□□ -0.64
COPB1-204ENST00000526191 PODNQ7Z5L7 613 aa11.02□□□□□ -0.65
COPB1-204ENST00000526191 LRFN2Q9ULH4 789 aa11.02□□□□□ -0.65
COPB1-204ENST00000526191 GDF11O95390 407 aa11.01□□□□□ -0.65
COPB1-204ENST00000526191 TMEM151AQ8N4L1 468 aa11.01□□□□□ -0.65
COPB1-204ENST00000526191 BEND7Q8N7W2 519 aaPredicted RBP11.01□□□□□ -0.65
COPB1-204ENST00000526191 CXXC1Q9P0U4 656 aaPredicted RBP11.01□□□□□ -0.65
COPB1-204ENST00000526191 GRNP28799 593 aaKnown RBP11□□□□□ -0.65
COPB1-204ENST00000526191 CAPN12Q6ZSI9 719 aa11□□□□□ -0.65
COPB1-204ENST00000526191 MKNK1Q9BUB5 465 aa11□□□□□ -0.65
COPB1-204ENST00000526191 PHF20L1A8MW92 1017 aa10.99□□□□□ -0.65
COPB1-204ENST00000526191 IDH3AP50213 366 aa10.99□□□□□ -0.65
COPB1-204ENST00000526191 C11orf91Q3C1V1 193 aa10.99□□□□□ -0.65
COPB1-204ENST00000526191 COX20Q5RI15 118 aa10.99□□□□□ -0.65
COPB1-204ENST00000526191 KANK3Q6NY19 840 aa10.99□□□□□ -0.65
COPB1-204ENST00000526191 CHSY3Q70JA7 882 aa10.99□□□□□ -0.65
COPB1-204ENST00000526191 CLP1Q92989 425 aaKnown RBP10.99□□□□□ -0.65
COPB1-204ENST00000526191 MDFIQ99750 246 aa10.99□□□□□ -0.65
COPB1-204ENST00000526191 SAP130Q9H0E3 1048 aa10.99□□□□□ -0.65
COPB1-204ENST00000526191 SIN3BO75182 1162 aa10.98□□□□□ -0.65
COPB1-204ENST00000526191 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.98□□□□□ -0.652e-6■■■■□ 23.6
COPB1-204ENST00000526191 KCTD17Q8N5Z5 321 aa10.97□□□□□ -0.65
COPB1-204ENST00000526191 BHMTQ93088 406 aa10.97□□□□□ -0.65
COPB1-204ENST00000526191 MKL2Q9ULH7 1088 aa10.97□□□□□ -0.65
COPB1-204ENST00000526191 ELOA3CA0A087WX78 387 aaPredicted RBP10.96□□□□□ -0.65
COPB1-204ENST00000526191 ELOA3DA6NLF2 546 aaPredicted RBP10.96□□□□□ -0.65
COPB1-204ENST00000526191 MICAL2O94851 1124 aa10.96□□□□□ -0.65
COPB1-204ENST00000526191 INPP5BP32019 993 aa10.96□□□□□ -0.65
COPB1-204ENST00000526191 DGKGP49619 791 aa10.96□□□□□ -0.65
COPB1-204ENST00000526191 ELOA3BQ3SY89 546 aa10.96□□□□□ -0.65
COPB1-204ENST00000526191 LINC00114Q6XXX2 140 aa10.96□□□□□ -0.65
COPB1-204ENST00000526191 ELOA3Q8NG57 546 aa10.96□□□□□ -0.65
COPB1-204ENST00000526191 IFT43Q96FT9 208 aa10.96□□□□□ -0.65
COPB1-204ENST00000526191 TNFRSF25Q93038 417 aa10.95□□□□□ -0.66
COPB1-204ENST00000526191 ADARB2-AS1A8MUL3 147 aa10.94□□□□□ -0.66
COPB1-204ENST00000526191 ARSDP51689 593 aa10.94□□□□□ -0.66
COPB1-204ENST00000526191 NEUROD1Q13562 356 aa10.94□□□□□ -0.66
COPB1-204ENST00000526191 NAA30Q147X3 362 aaPredicted RBP10.94□□□□□ -0.66
COPB1-204ENST00000526191 GSX2Q9BZM3 304 aa10.94□□□□□ -0.66
COPB1-204ENST00000526191 USP20Q9Y2K6 914 aa10.94□□□□□ -0.66
COPB1-204ENST00000526191 ATP2B4P23634 1241 aa10.93□□□□□ -0.66
COPB1-204ENST00000526191 C16orf46Q6P387 395 aa10.93□□□□□ -0.66
COPB1-204ENST00000526191 SUV39H2Q9H5I1 410 aa10.93□□□□□ -0.66
COPB1-204ENST00000526191 OPLAHO14841 1288 aa10.92□□□□□ -0.66
COPB1-204ENST00000526191 PPP1R15AO75807 674 aaPredicted RBP10.92□□□□□ -0.66
COPB1-204ENST00000526191 ADH7P40394 386 aa10.92□□□□□ -0.66
COPB1-204ENST00000526191 CCINQ13939 588 aa10.92□□□□□ -0.66
COPB1-204ENST00000526191 FAM26DQ5JW98 314 aa10.92□□□□□ -0.66
COPB1-204ENST00000526191 TREML1Q86YW5 311 aa10.92□□□□□ -0.66
COPB1-204ENST00000526191 COL26A1Q96A83 441 aa10.92□□□□□ -0.66
COPB1-204ENST00000526191 TMEM88BA6NKF7 163 aa10.91□□□□□ -0.66
COPB1-204ENST00000526191 SUPT5HO00267 1087 aaKnown RBP10.91□□□□□ -0.66
COPB1-204ENST00000526191 EPB42P16452 691 aa10.91□□□□□ -0.66
COPB1-204ENST00000526191 ALAS2P22557 587 aa10.91□□□□□ -0.66
COPB1-204ENST00000526191 COL8A1P27658 744 aa10.91□□□□□ -0.66
COPB1-204ENST00000526191 TBC1D8BQ0IIM8 1120 aa10.91□□□□□ -0.66
COPB1-204ENST00000526191 ETFBKMTQ8IXQ9 262 aa10.91□□□□□ -0.66
COPB1-204ENST00000526191 DCAF5Q96JK2 942 aa10.91□□□□□ -0.66
COPB1-204ENST00000526191 TIMELESSQ9UNS1 1208 aa10.91□□□□□ -0.66
COPB1-204ENST00000526191 STARD13Q9Y3M8 1113 aa10.91□□□□□ -0.66
COPB1-204ENST00000526191 TNFRSF10BO14763 440 aa10.9□□□□□ -0.66
COPB1-204ENST00000526191 NFKB1P19838 968 aa10.9□□□□□ -0.66
COPB1-204ENST00000526191 SCNN1AP37088 669 aa10.9□□□□□ -0.66
COPB1-204ENST00000526191 IGFLR1Q9H665 355 aa10.9□□□□□ -0.66
COPB1-204ENST00000526191 CARNS1A5YM72 827 aa10.89□□□□□ -0.67
COPB1-204ENST00000526191 PTCD1O75127 700 aaKnown RBP10.89□□□□□ -0.67
COPB1-204ENST00000526191 KRT25Q7Z3Z0 450 aa10.89□□□□□ -0.67
COPB1-204ENST00000526191 PNMA5Q96PV4 448 aa10.89□□□□□ -0.67
COPB1-204ENST00000526191 UBE2OQ9C0C9 1292 aaKnown RBP10.89□□□□□ -0.67
COPB1-204ENST00000526191 SEPT3Q9UH03 358 aa10.89□□□□□ -0.67
COPB1-204ENST00000526191 RTCBQ9Y3I0 505 aaKnown RBP10.89□□□□□ -0.67
COPB1-204ENST00000526191 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.89□□□□□ -0.67
COPB1-204ENST00000526191 GNB5O14775 395 aa10.88□□□□□ -0.67
COPB1-204ENST00000526191 ALBP02768 609 aa10.88□□□□□ -0.67
COPB1-204ENST00000526191 RGL4Q8IZJ4 473 aa10.88□□□□□ -0.67
COPB1-204ENST00000526191 BRD2P25440 801 aaKnown RBP10.87□□□□□ -0.67
COPB1-204ENST00000526191 C8orf86Q6ZUL3 223 aa10.87□□□□□ -0.67
COPB1-204ENST00000526191 TRIM11Q96F44 468 aa10.87□□□□□ -0.67
COPB1-204ENST00000526191 ARID3AQ99856 593 aa10.87□□□□□ -0.67
COPB1-204ENST00000526191 ZFATQ9P243 1243 aa10.87□□□□□ -0.67
COPB1-204ENST00000526191 M0R082 166 aa10.86□□□□□ -0.67
COPB1-204ENST00000526191 TARSP26639 723 aaKnown RBP10.86□□□□□ -0.67
COPB1-204ENST00000526191 CMTR1Q8N1G2 835 aaKnown RBP10.86□□□□□ -0.67
COPB1-204ENST00000526191 ZNF417Q8TAU3 575 aa10.86□□□□□ -0.67
COPB1-204ENST00000526191 ZNF587Q96SQ5 575 aaPredicted RBP10.86□□□□□ -0.67
COPB1-204ENST00000526191 EFCC1Q9HA90 598 aa10.86□□□□□ -0.67
COPB1-204ENST00000526191 DNAJB12Q9NXW2 375 aaKnown RBP10.86□□□□□ -0.67
COPB1-204ENST00000526191 SASH3O75995 380 aa10.85□□□□□ -0.67
COPB1-204ENST00000526191 ERICH6Q7L0X2 663 aa10.85□□□□□ -0.67
COPB1-204ENST00000526191 SLC6A14Q9UN76 642 aa10.85□□□□□ -0.67
COPB1-204ENST00000526191 ITGB2P05107 769 aa10.84□□□□□ -0.67
COPB1-204ENST00000526191 MICALL1Q8N3F8 863 aa10.84□□□□□ -0.67
COPB1-204ENST00000526191 KCNMB2Q9Y691 235 aa10.84□□□□□ -0.67
COPB1-204ENST00000526191 KRBA1A5PL33 1030 aa10.83□□□□□ -0.68
COPB1-204ENST00000526191 PIK3R2O00459 728 aa10.83□□□□□ -0.68
COPB1-204ENST00000526191 PLA2G4EQ3MJ16 856 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms