RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 PHAXQ9H814 394 aaKnown RBP22■■□□□ 1.11
CCS-203ENST00000526058 IL16Q14005 1332 aa22■■□□□ 1.11
CCS-203ENST00000526058 NLRP10Q86W26 655 aa21.99■■□□□ 1.11
CCS-203ENST00000526058 ZNF428Q96B54 188 aa21.99■■□□□ 1.11
CCS-203ENST00000526058 LMNB1P20700 586 aa21.98■■□□□ 1.11
CCS-203ENST00000526058 CRY2Q49AN0 593 aa21.98■■□□□ 1.11
CCS-203ENST00000526058 C3orf67Q6ZVT6 689 aa21.98■■□□□ 1.11
CCS-203ENST00000526058 C7orf43Q8WVR3 580 aa21.98■■□□□ 1.11
CCS-203ENST00000526058 RIC1Q4ADV7 1423 aa21.97■■□□□ 1.11
CCS-203ENST00000526058 C1QTNF8P60827 252 aa21.97■■□□□ 1.11
CCS-203ENST00000526058 ALDH1B1P30837 517 aa21.96■■□□□ 1.11
CCS-203ENST00000526058 CCDC30Q5VVM6 783 aa21.96■■□□□ 1.11
CCS-203ENST00000526058 OLFM4Q6UX06 510 aa21.96■■□□□ 1.11
CCS-203ENST00000526058 WDR63Q8IWG1 891 aa21.96■■□□□ 1.11
CCS-203ENST00000526058 SYNE4Q8N205 404 aa21.96■■□□□ 1.11
CCS-203ENST00000526058 ATP5J2-PTCD1G3V325 749 aa21.95■■□□□ 1.1
CCS-203ENST00000526058 SLC10A5Q5PT55 438 aa21.95■■□□□ 1.1
CCS-203ENST00000526058 ISCA1Q9BUE6 129 aa21.95■■□□□ 1.1
CCS-203ENST00000526058 TRMT112Q9UI30 125 aaKnown RBP21.95■■□□□ 1.1
CCS-203ENST00000526058 TCERG1O14776 1098 aaKnown RBP21.94■■□□□ 1.1
CCS-203ENST00000526058 RPGRQ92834 1020 aaKnown RBP21.94■■□□□ 1.1
CCS-203ENST00000526058 FANCIQ9NVI1 1328 aa21.94■■□□□ 1.1
CCS-203ENST00000526058 TIAM2Q8IVF5 1701 aa21.94■■□□□ 1.1
CCS-203ENST00000526058 LAMB2P55268 1798 aa21.94■■□□□ 1.1
CCS-203ENST00000526058 DICER1Q9UPY3 1922 aaKnown RBP21.94■■□□□ 1.1
CCS-203ENST00000526058 HCLS1P14317 486 aaPredicted RBP21.93■■□□□ 1.1
CCS-203ENST00000526058 HOXA10P31260 410 aaPredicted RBP21.93■■□□□ 1.1
CCS-203ENST00000526058 TWISTNBQ3B726 338 aaPredicted RBP21.93■■□□□ 1.1
CCS-203ENST00000526058 SOGA3Q5TF21 947 aa21.93■■□□□ 1.1
CCS-203ENST00000526058 RIC3Q7Z5B4 369 aa21.93■■□□□ 1.1
CCS-203ENST00000526058 NLRP3Q96P20 1036 aa21.93■■□□□ 1.1
CCS-203ENST00000526058 TAOK3Q9H2K8 898 aa21.93■■□□□ 1.1
CCS-203ENST00000526058 SPINK5Q9NQ38 1064 aaPredicted RBP21.93■■□□□ 1.1
CCS-203ENST00000526058 RNF123Q5XPI4 1314 aa21.92■■□□□ 1.1
CCS-203ENST00000526058 LTBP3Q9NS15 1303 aa21.92■■□□□ 1.1
CCS-203ENST00000526058 KIF3CO14782 793 aa21.92■■□□□ 1.1
CCS-203ENST00000526058 GOLGA2Q08379 1002 aa21.92■■□□□ 1.1
CCS-203ENST00000526058 CCDC93Q567U6 631 aa21.92■■□□□ 1.1
CCS-203ENST00000526058 CHMP4AQ9BY43 222 aa21.92■■□□□ 1.1
CCS-203ENST00000526058 NMRK2Q9NPI5 230 aa21.92■■□□□ 1.1
CCS-203ENST00000526058 SH3TC1Q8TE82 1336 aa21.91■■□□□ 1.1
CCS-203ENST00000526058 RBM17Q96I25 401 aaKnown RBP21.91■■□□□ 1.1
CCS-203ENST00000526058 CRAMP1Q96RY5 1269 aa21.9■■□□□ 1.1
CCS-203ENST00000526058 DDX60Q8IY21 1712 aaKnown RBP21.89■■□□□ 1.1
CCS-203ENST00000526058 ZC3H4Q9UPT8 1303 aaKnown RBP21.89■■□□□ 1.1
CCS-203ENST00000526058 EXOSC9Q06265 439 aaKnown RBP21.89■■□□□ 1.09
CCS-203ENST00000526058 SLC51AQ86UW1 340 aa21.89■■□□□ 1.09
CCS-203ENST00000526058 FAM89AQ96GI7 184 aa21.89■■□□□ 1.09
CCS-203ENST00000526058 MYD88Q99836 296 aa21.89■■□□□ 1.09
CCS-203ENST00000526058 KDM2BQ8NHM5 1336 aa21.88■■□□□ 1.09
CCS-203ENST00000526058 TRIM28Q13263 835 aaKnown RBP21.88■■□□□ 1.09
CCS-203ENST00000526058 STK31Q9BXU1 1019 aa21.88■■□□□ 1.09
CCS-203ENST00000526058 FKBP4Q02790 459 aaKnown RBP eCLIP21.87■■□□□ 1.09
CCS-203ENST00000526058 RTL5Q5HYW3 569 aaPredicted RBP21.87■■□□□ 1.09
CCS-203ENST00000526058 G2E3Q7L622 706 aa21.87■■□□□ 1.09
CCS-203ENST00000526058 RTKN2Q8IZC4 609 aa21.87■■□□□ 1.09
CCS-203ENST00000526058 RRAGCQ9HB90 399 aa21.87■■□□□ 1.09
CCS-203ENST00000526058 TAF1P21675 1872 aa21.87■■□□□ 1.09
CCS-203ENST00000526058 PPEF1O14829 653 aaPredicted RBP21.86■■□□□ 1.09
CCS-203ENST00000526058 VAMP4O75379 141 aa21.86■■□□□ 1.09
CCS-203ENST00000526058 DDX58O95786 925 aaKnown RBP21.86■■□□□ 1.09
CCS-203ENST00000526058 SLC4A2P04920 1241 aa21.86■■□□□ 1.09
CCS-203ENST00000526058 ZNF277Q9NRM2 450 aaPredicted RBP21.86■■□□□ 1.09
CCS-203ENST00000526058 MAP3K2Q9Y2U5 619 aa21.86■■□□□ 1.09
CCS-203ENST00000526058 SNED1Q8TER0 1413 aa21.86■■□□□ 1.09
CCS-203ENST00000526058 ABCC4O15439 1325 aa21.85■■□□□ 1.09
CCS-203ENST00000526058 ZNF521Q96K83 1311 aa21.85■■□□□ 1.09
CCS-203ENST00000526058 GLTPD2A6NH11 291 aa21.85■■□□□ 1.09
CCS-203ENST00000526058 METTL22Q9BUU2 404 aaPredicted RBP21.85■■□□□ 1.09
CCS-203ENST00000526058 PI4KAP2A4QPH2 592 aa21.84■■□□□ 1.09
CCS-203ENST00000526058 KSR2Q6VAB6 950 aa21.84■■□□□ 1.09
CCS-203ENST00000526058 PI4KAP1Q8N8J0 262 aa21.84■■□□□ 1.09
CCS-203ENST00000526058 MYH16Q9H6N6 1097 aa21.84■■□□□ 1.09
CCS-203ENST00000526058 CACNA1FO60840 1977 aa21.84■■□□□ 1.09
CCS-203ENST00000526058 CC2D2BQ6DHV5 1058 aa21.83■■□□□ 1.09
CCS-203ENST00000526058 CCER2I3L3R5 266 aa21.82■■□□□ 1.08
CCS-203ENST00000526058 IRS4O14654 1257 aaPredicted RBP21.82■■□□□ 1.08
CCS-203ENST00000526058 CCDC191Q8NCU4 936 aa21.82■■□□□ 1.08
CCS-203ENST00000526058 JARID2Q92833 1246 aaPredicted RBP21.82■■□□□ 1.08
CCS-203ENST00000526058 DPY19L2Q6NUT2 758 aa21.81■■□□□ 1.08
CCS-203ENST00000526058 DDX46Q7L014 1031 aaKnown RBP21.81■■□□□ 1.08
CCS-203ENST00000526058 ZBTB38Q8NAP3 1195 aaPredicted RBP21.81■■□□□ 1.08
CCS-203ENST00000526058 PSMD1Q99460 953 aa21.81■■□□□ 1.08
CCS-203ENST00000526058 CWC25Q9NXE8 425 aaPredicted RBP21.81■■□□□ 1.08
CCS-203ENST00000526058 ATP6V0A2Q9Y487 856 aa21.81■■□□□ 1.08
CCS-203ENST00000526058 CEP350Q5VT06 3117 aa21.8■■□□□ 1.08
CCS-203ENST00000526058 TOMM70O94826 608 aa21.8■■□□□ 1.08
CCS-203ENST00000526058 IGKV5-2P06315 115 aa21.8■■□□□ 1.08
CCS-203ENST00000526058 IARSP41252 1262 aaKnown RBP21.8■■□□□ 1.08
CCS-203ENST00000526058 FLIIQ13045 1269 aa21.8■■□□□ 1.08
CCS-203ENST00000526058 SF3B3Q15393 1217 aaKnown RBP21.8■■□□□ 1.08
CCS-203ENST00000526058 BBOX1O75936 387 aa21.79■■□□□ 1.08
CCS-203ENST00000526058 PCCAP05165 728 aaPredicted RBP21.79■■□□□ 1.08
CCS-203ENST00000526058 GRAPQ13588 217 aa21.79■■□□□ 1.08
CCS-203ENST00000526058 GRAPLQ8TC17 118 aaPredicted RBP21.79■■□□□ 1.08
CCS-203ENST00000526058 POTECB2RU33 542 aa21.78■■□□□ 1.08
CCS-203ENST00000526058 DDNO94850 711 aaPredicted RBP21.78■■□□□ 1.08
CCS-203ENST00000526058 C16orf71Q8IYS4 520 aaPredicted RBP21.78■■□□□ 1.08
CCS-203ENST00000526058 COL4A1P02462 1669 aa21.78■■□□□ 1.08
CCS-203ENST00000526058 WDR90Q96KV7 1748 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms