RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ATP2B4P23634 1241 aa7.6□□□□□ -1.19
USP48-211ENST00000526044 SNRPNP63162 240 aaKnown RBP7.6□□□□□ -1.19
USP48-211ENST00000526044 RTN1Q16799 776 aa7.6□□□□□ -1.19
USP48-211ENST00000526044 SAMD5Q5TGI4 173 aa7.6□□□□□ -1.19
USP48-211ENST00000526044 LRRC69Q6ZNQ3 347 aa7.6□□□□□ -1.19
USP48-211ENST00000526044 SLAIN2Q9P270 581 aa7.6□□□□□ -1.19
USP48-211ENST00000526044 GDF2Q9UK05 429 aaPredicted RBP7.6□□□□□ -1.19
USP48-211ENST00000526044 ATXN7L1Q9ULK2 861 aaPredicted RBP7.6□□□□□ -1.19
USP48-211ENST00000526044 USTQ9Y2C2 406 aa7.6□□□□□ -1.19
USP48-211ENST00000526044 BNIP3LO60238 219 aa7.59□□□□□ -1.19
USP48-211ENST00000526044 PDE4CQ08493 712 aa7.59□□□□□ -1.19
USP48-211ENST00000526044 COL26A1Q96A83 441 aa7.59□□□□□ -1.19
USP48-211ENST00000526044 SUSD3Q96L08 255 aa7.59□□□□□ -1.19
USP48-211ENST00000526044 NDFIP2Q9NV92 336 aa7.59□□□□□ -1.19
USP48-211ENST00000526044 PTCD1O75127 700 aaKnown RBP7.58□□□□□ -1.2
USP48-211ENST00000526044 AMPD1P23109 780 aa7.58□□□□□ -1.2
USP48-211ENST00000526044 GRIN2CQ14957 1233 aa7.58□□□□□ -1.2
USP48-211ENST00000526044 KLRG1Q96E93 195 aa7.58□□□□□ -1.2
USP48-211ENST00000526044 ABHD17AQ96GS6 310 aa7.58□□□□□ -1.2
USP48-211ENST00000526044 CCDC88BA6NC98 1476 aa7.57□□□□□ -1.2
USP48-211ENST00000526044 KHNYNO15037 678 aaKnown RBP7.57□□□□□ -1.2
USP48-211ENST00000526044 FAM157BP0CG42 384 aa7.57□□□□□ -1.2
USP48-211ENST00000526044 TNP2Q05952 138 aa7.57□□□□□ -1.2
USP48-211ENST00000526044 GOLGA6L1Q8N7Z2 621 aa7.57□□□□□ -1.2
USP48-211ENST00000526044 ZNF280CQ8ND82 737 aa7.57□□□□□ -1.2
USP48-211ENST00000526044 EDARADDQ8WWZ3 215 aa7.57□□□□□ -1.2
USP48-211ENST00000526044 MYO19Q96H55 970 aa7.57□□□□□ -1.2
USP48-211ENST00000526044 QTRT2Q9H974 415 aaKnown RBP7.57□□□□□ -1.2
USP48-211ENST00000526044 CARNS1A5YM72 827 aa7.56□□□□□ -1.2
USP48-211ENST00000526044 MAPTP10636 758 aaKnown RBP7.56□□□□□ -1.2
USP48-211ENST00000526044 FGFR3P22607 806 aa7.56□□□□□ -1.2
USP48-211ENST00000526044 SSFA2P28290 1259 aa7.56□□□□□ -1.2
USP48-211ENST00000526044 C11orf91Q3C1V1 193 aa7.56□□□□□ -1.2
USP48-211ENST00000526044 RETREG2Q8NC44 543 aa7.56□□□□□ -1.2
USP48-211ENST00000526044 HSH2DQ96JZ2 352 aa7.56□□□□□ -1.2
USP48-211ENST00000526044 PSMG3-AS1Q96PY0 264 aa7.56□□□□□ -1.2
USP48-211ENST00000526044 MKNK1Q9BUB5 465 aa7.56□□□□□ -1.2
USP48-211ENST00000526044 KRTAP4-8Q9BYQ9 185 aa7.56□□□□□ -1.2
USP48-211ENST00000526044 DCDC2BA2VCK2 349 aa7.55□□□□□ -1.2
USP48-211ENST00000526044 SHISA8B8ZZ34 492 aa7.55□□□□□ -1.2
USP48-211ENST00000526044 DGKZQ13574 1117 aa7.55□□□□□ -1.2
USP48-211ENST00000526044 LAMC2Q13753 1193 aa7.55□□□□□ -1.2
USP48-211ENST00000526044 CEP63Q96MT8 703 aa7.55□□□□□ -1.2
USP48-211ENST00000526044 KLK14Q9P0G3 267 aa7.55□□□□□ -1.2
USP48-211ENST00000526044 TGFBR3LH3BV60 316 aa7.54□□□□□ -1.2
USP48-211ENST00000526044 EFSO43281 561 aa7.54□□□□□ -1.2
USP48-211ENST00000526044 COL8A1P27658 744 aa7.54□□□□□ -1.2
USP48-211ENST00000526044 CTBSQ01459 385 aa7.54□□□□□ -1.2
USP48-211ENST00000526044 NAA30Q147X3 362 aaPredicted RBP7.54□□□□□ -1.2
USP48-211ENST00000526044 COX20Q5RI15 118 aa7.54□□□□□ -1.2
USP48-211ENST00000526044 IER5Q5VY09 327 aa7.54□□□□□ -1.2
USP48-211ENST00000526044 C16orf46Q6P387 395 aa7.54□□□□□ -1.2
USP48-211ENST00000526044 CAPN12Q6ZSI9 719 aa7.54□□□□□ -1.2
USP48-211ENST00000526044 BTLAQ7Z6A9 289 aa7.54□□□□□ -1.2
USP48-211ENST00000526044 LRFN2Q9ULH4 789 aa7.54□□□□□ -1.2
USP48-211ENST00000526044 FAM182BQ5T319 152 aa7.53□□□□□ -1.2
USP48-211ENST00000526044 B4GALNT3Q6L9W6 998 aa7.53□□□□□ -1.2
USP48-211ENST00000526044 NOP53Q9NZM5 478 aaKnown RBP7.53□□□□□ -1.2
USP48-211ENST00000526044 MARK1Q9P0L2 795 aa7.53□□□□□ -1.2
USP48-211ENST00000526044 BCS1LQ9Y276 419 aa7.53□□□□□ -1.2
USP48-211ENST00000526044 GNB5O14775 395 aa7.52□□□□□ -1.21
USP48-211ENST00000526044 BMP4P12644 408 aa7.52□□□□□ -1.21
USP48-211ENST00000526044 TYRO3Q06418 890 aa7.52□□□□□ -1.21
USP48-211ENST00000526044 IFT43Q96FT9 208 aa7.52□□□□□ -1.21
USP48-211ENST00000526044 SAP130Q9H0E3 1048 aa7.52□□□□□ -1.21
USP48-211ENST00000526044 BRD7Q9NPI1 651 aa7.52□□□□□ -1.21
USP48-211ENST00000526044 C2CD2LO14523 706 aa7.51□□□□□ -1.21
USP48-211ENST00000526044 CD33P20138 364 aa7.51□□□□□ -1.21
USP48-211ENST00000526044 BRD2P25440 801 aaKnown RBP7.51□□□□□ -1.21
USP48-211ENST00000526044 PHLDB3Q6NSJ2 640 aa7.51□□□□□ -1.21
USP48-211ENST00000526044 STRN4Q9NRL3 753 aa7.51□□□□□ -1.21
USP48-211ENST00000526044 SEPT3Q9UH03 358 aa7.51□□□□□ -1.21
USP48-211ENST00000526044 DMGDHQ9UI17 866 aaKnown RBP7.51□□□□□ -1.21
USP48-211ENST00000526044 HCN2Q9UL51 889 aa7.51□□□□□ -1.21
USP48-211ENST00000526044 CADPSQ9ULU8 1353 aa7.5□□□□□ -1.21
USP48-211ENST00000526044 C1QTNF9BB2RNN3 333 aa7.5□□□□□ -1.21
USP48-211ENST00000526044 MICAL2O94851 1124 aa7.5□□□□□ -1.21
USP48-211ENST00000526044 KCNQ4P56696 695 aa7.5□□□□□ -1.21
USP48-211ENST00000526044 SFSWAPQ12872 951 aaKnown RBP7.5□□□□□ -1.21
USP48-211ENST00000526044 C1orf229Q6ZS94 237 aaPredicted RBP7.5□□□□□ -1.21
USP48-211ENST00000526044 KCNH4Q9UQ05 1017 aa7.5□□□□□ -1.21
USP48-211ENST00000526044 MTMR7Q9Y216 660 aa7.5□□□□□ -1.21
USP48-211ENST00000526044 SCNN1AP37088 669 aa7.49□□□□□ -1.21
USP48-211ENST00000526044 IDH3AP50213 366 aa7.49□□□□□ -1.21
USP48-211ENST00000526044 SLCO4C1Q6ZQN7 724 aa7.49□□□□□ -1.21
USP48-211ENST00000526044 PRR12Q9ULL5 1215 aa7.49□□□□□ -1.21
USP48-211ENST00000526044 TNFRSF10BO14763 440 aa7.48□□□□□ -1.21
USP48-211ENST00000526044 EPB42P16452 691 aa7.48□□□□□ -1.21
USP48-211ENST00000526044 INPP5BP32019 993 aa7.48□□□□□ -1.21
USP48-211ENST00000526044 LINC00114Q6XXX2 140 aa7.48□□□□□ -1.21
USP48-211ENST00000526044 TREML1Q86YW5 311 aa7.48□□□□□ -1.21
USP48-211ENST00000526044 SUV39H2Q9H5I1 410 aa7.48□□□□□ -1.21
USP48-211ENST00000526044 STIM2Q9P246 746 aa7.48□□□□□ -1.21
USP48-211ENST00000526044 GGA1Q9UJY5 639 aa7.48□□□□□ -1.21
USP48-211ENST00000526044 ARAFP10398 606 aa7.47□□□□□ -1.21
USP48-211ENST00000526044 ARID4AP29374 1257 aaPredicted RBP7.47□□□□□ -1.21
USP48-211ENST00000526044 ARSDP51689 593 aa7.47□□□□□ -1.21
USP48-211ENST00000526044 CD163Q86VB7 1156 aa7.47□□□□□ -1.21
USP48-211ENST00000526044 GTF3C2Q8WUA4 911 aaPredicted RBP7.47□□□□□ -1.21
USP48-211ENST00000526044 BTBD6Q96KE9 485 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms