RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 SLC4A8Q2Y0W8 1093 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 GPIHBP1Q8IV16 184 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 PHF23Q9BUL5 403 aaPredicted RBP8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 NSD2O96028 1365 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 RIMS2Q9UQ26 1411 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 ZNF518AQ6AHZ1 1483 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 SHANK2Q9UPX8 1470 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 A0A087WZG4 1122 aa8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 GOLGA8FQ08AF8 430 aa8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 GOLGA8DPQ0D2H9 430 aa8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 PLEKHO1Q53GL0 409 aaPredicted RBP8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 HSP90B2PQ58FF3 399 aa8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 SH2B1Q9NRF2 756 aaPredicted RBP8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 TPCN1Q9ULQ1 816 aa8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 PRAMEF22A3QJZ6 481 aa8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 SNW1Q13573 536 aaKnown RBP8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 ANKRD1Q15327 319 aa8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 UVSSAQ2YD98 709 aa8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 SPECC1Q5M775 1068 aa8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 ZNF396Q96N95 335 aaPredicted RBP8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 PHACTR2O75167 634 aa8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 CHGBP05060 677 aa8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 TPM1P09493 284 aa8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 TIMM10P62072 90 aa8.12□□□□□ -1.11
TGFBR3-207ENST00000525962 ERC1Q8IUD2 1116 aa8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 EVI5LQ96CN4 794 aa8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 SRRTQ9BXP5 876 aaKnown RBP8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 IFNKQ9P0W0 207 aa8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 AK9Q5TCS8 1911 aa8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 HSPA4P34932 840 aa8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 DNA2P51530 1060 aa8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 NAP1L1P55209 391 aaKnown RBP8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 COPS6Q7L5N1 327 aa8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 MICU3Q86XE3 530 aa8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 INTS4Q96HW7 963 aaKnown RBP8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 C8orf76Q96K31 380 aa8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 TLR7Q9NYK1 1049 aaKnown RBP8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 MTMR6Q9Y217 621 aa8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 RAD21O60216 631 aa8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 ANAPC15P60006 121 aa8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 BICC1Q9H694 974 aaKnown RBP8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 SBNO2Q9Y2G9 1366 aa8.11□□□□□ -1.11
TGFBR3-207ENST00000525962 GOLGA8BA8MQT2 603 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 KARSQ15046 597 aaKnown RBP8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 TMCO3Q6UWJ1 677 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 DDX19AQ9NUU7 478 aaKnown RBP8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 ZNF215Q9UL58 517 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 A0A0D9SFI3 127 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 SLC3A2P08195 630 aaKnown RBP8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 GTF2E1P29083 439 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 GNG11P61952 73 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 MCM6Q14566 821 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 CHRNA2Q15822 529 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 TTC39AQ5SRH9 613 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 AXDND1Q5T1B0 1012 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 XAGE3Q8WTP9 111 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 CCDC102AQ96A19 550 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 HINFPQ9BQA5 517 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 TRIM34Q9BYJ4 488 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 STRN4Q9NRL3 753 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 ANO10Q9NW15 660 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 ABCC2Q92887 1545 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 PRDM15P57071 1507 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 ARHGAP29Q52LW3 1261 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 FKBP15Q5T1M5 1219 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 IL17REQ8NFR9 667 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 RABEP2Q9H5N1 569 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 ORC3Q9UBD5 711 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 DBF4Q9UBU7 674 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 EIF2AK4Q9P2K8 1649 aaKnown RBP8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 HIP1O00291 1037 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 SLC27A2O14975 620 aa8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 IFIT1P09914 478 aaKnown RBP8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 SAFBQ15424 915 aaKnown RBP eCLIP8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 SMAP1Q8IYB5 467 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 LEO1Q8WVC0 666 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-207ENST00000525962 CCDC171Q6TFL3 1326 aa8.09□□□□□ -1.11
TGFBR3-207ENST00000525962 GPTP24298 496 aa8.09□□□□□ -1.11
TGFBR3-207ENST00000525962 TFCP2Q12800 502 aa8.09□□□□□ -1.11
TGFBR3-207ENST00000525962 ERCC6LQ2NKX8 1250 aa8.09□□□□□ -1.11
TGFBR3-207ENST00000525962 PROSER3Q2NL68 480 aa8.09□□□□□ -1.11
TGFBR3-207ENST00000525962 CACTINQ8WUQ7 758 aaKnown RBP8.09□□□□□ -1.11
TGFBR3-207ENST00000525962 GJB4Q9NTQ9 266 aa8.09□□□□□ -1.11
TGFBR3-207ENST00000525962 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.09□□□□□ -1.11
TGFBR3-207ENST00000525962 SAMD9LQ8IVG5 1584 aa8.09□□□□□ -1.11
TGFBR3-207ENST00000525962 RAD50Q92878 1312 aa8.09□□□□□ -1.11
TGFBR3-207ENST00000525962 IPO7O95373 1038 aaKnown RBP8.09□□□□□ -1.11
TGFBR3-207ENST00000525962 LMAN1P49257 510 aa8.09□□□□□ -1.11
TGFBR3-207ENST00000525962 STX17P56962 302 aa8.09□□□□□ -1.11
TGFBR3-207ENST00000525962 DHX8Q14562 1220 aaKnown RBP8.09□□□□□ -1.11
TGFBR3-207ENST00000525962 NOL10Q9BSC4 688 aaKnown RBP8.09□□□□□ -1.11
TGFBR3-207ENST00000525962 IQSEC3Q9UPP2 1182 aaPredicted RBP8.09□□□□□ -1.11
TGFBR3-207ENST00000525962 YTHDC2Q9H6S0 1430 aaKnown RBP8.09□□□□□ -1.12
TGFBR3-207ENST00000525962 PTPDC1A2A3K4 754 aa8.09□□□□□ -1.12
TGFBR3-207ENST00000525962 MARCH6O60337 910 aa8.09□□□□□ -1.12
TGFBR3-207ENST00000525962 TOP1P11387 765 aaKnown RBP8.09□□□□□ -1.12
TGFBR3-207ENST00000525962 ZNF75DP51815 510 aa8.09□□□□□ -1.12
TGFBR3-207ENST00000525962 STX1AQ16623 288 aa8.09□□□□□ -1.12
TGFBR3-207ENST00000525962 ZSCAN25Q6NSZ9 544 aa8.09□□□□□ -1.12
TGFBR3-207ENST00000525962 LMBR1LQ6UX01 489 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms