RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 ELL2O00472 640 aaPredicted RBP16.51■□□□□ 0.23
CLP1-202ENST00000525602 AIMP1Q12904 312 aaKnown RBP16.51■□□□□ 0.23
CLP1-202ENST00000525602 PDZRN3Q9UPQ7 1066 aa16.51■□□□□ 0.23
CLP1-202ENST00000525602 IBTKQ9P2D0 1353 aaPredicted RBP16.51■□□□□ 0.23
CLP1-202ENST00000525602 CCER2I3L3R5 266 aa16.51■□□□□ 0.23
CLP1-202ENST00000525602 POTEIP0CG38 1075 aa16.51■□□□□ 0.23
CLP1-202ENST00000525602 POTEJP0CG39 1038 aa16.51■□□□□ 0.23
CLP1-202ENST00000525602 GPTP24298 496 aa16.51■□□□□ 0.23
CLP1-202ENST00000525602 TPTE2Q6XPS3 522 aa16.51■□□□□ 0.23
CLP1-202ENST00000525602 WDR63Q8IWG1 891 aa16.51■□□□□ 0.23
CLP1-202ENST00000525602 ZNF34Q8IZ26 560 aa16.51■□□□□ 0.23
CLP1-202ENST00000525602 ABCC12Q96J65 1359 aa16.5■□□□□ 0.23
CLP1-202ENST00000525602 FANCIQ9NVI1 1328 aa16.5■□□□□ 0.23
CLP1-202ENST00000525602 TSPYL6Q8N831 410 aa16.5■□□□□ 0.23
CLP1-202ENST00000525602 NYXQ9GZU5 481 aa16.5■□□□□ 0.23
CLP1-202ENST00000525602 ERFEQ4G0M1 354 aa16.49■□□□□ 0.23
CLP1-202ENST00000525602 HYPKQ9NX55 129 aa16.49■□□□□ 0.23
CLP1-202ENST00000525602 HSPA1AP0DMV8 641 aaKnown RBP16.48■□□□□ 0.23
CLP1-202ENST00000525602 HSPA1BP0DMV9 641 aaKnown RBP16.48■□□□□ 0.23
CLP1-202ENST00000525602 PARP10Q53GL7 1025 aa16.48■□□□□ 0.23
CLP1-202ENST00000525602 HSP90AB3PQ58FF7 597 aa16.48■□□□□ 0.23
CLP1-202ENST00000525602 SUSD4Q5VX71 490 aa16.48■□□□□ 0.23
CLP1-202ENST00000525602 PRPF40BQ6NWY9 871 aaKnown RBP16.48■□□□□ 0.23
CLP1-202ENST00000525602 NUTM1Q86Y26 1132 aa16.48■□□□□ 0.23
CLP1-202ENST00000525602 NTSR2O95665 410 aa16.47■□□□□ 0.23
CLP1-202ENST00000525602 GTF2E1P29083 439 aaPredicted RBP16.47■□□□□ 0.23
CLP1-202ENST00000525602 CCDC30Q5VVM6 783 aa16.47■□□□□ 0.23
CLP1-202ENST00000525602 TNS4Q8IZW8 715 aa16.47■□□□□ 0.23
CLP1-202ENST00000525602 PLBD2Q8NHP8 589 aa16.47■□□□□ 0.23
CLP1-202ENST00000525602 TAOK3Q9H2K8 898 aa16.47■□□□□ 0.23
CLP1-202ENST00000525602 RIC1Q4ADV7 1423 aa16.46■□□□□ 0.23
CLP1-202ENST00000525602 KLRG2A4D1S0 409 aaPredicted RBP16.46■□□□□ 0.23
CLP1-202ENST00000525602 DDNO94850 711 aaPredicted RBP16.46■□□□□ 0.23
CLP1-202ENST00000525602 SRGNP10124 158 aa16.46■□□□□ 0.23
CLP1-202ENST00000525602 TWISTNBQ3B726 338 aaPredicted RBP16.46■□□□□ 0.23
CLP1-202ENST00000525602 STYK1Q6J9G0 422 aa16.46■□□□□ 0.23
CLP1-202ENST00000525602 OLFM4Q6UX06 510 aa16.46■□□□□ 0.23
CLP1-202ENST00000525602 CHMP4AQ9BY43 222 aa16.46■□□□□ 0.23
CLP1-202ENST00000525602 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
CLP1-202ENST00000525602 ZNF521Q96K83 1311 aa16.45■□□□□ 0.22
CLP1-202ENST00000525602 TCIRG1Q13488 830 aa16.45■□□□□ 0.22
CLP1-202ENST00000525602 DIEXFQ68CQ4 756 aaKnown RBP16.45■□□□□ 0.22
CLP1-202ENST00000525602 ANKRD13DQ6ZTN6 518 aa16.45■□□□□ 0.22
CLP1-202ENST00000525602 PPP1R42Q7Z4L9 355 aa16.45■□□□□ 0.22
CLP1-202ENST00000525602 MASTLQ96GX5 879 aa16.45■□□□□ 0.22
CLP1-202ENST00000525602 PHAXQ9H814 394 aaKnown RBP16.45■□□□□ 0.22
CLP1-202ENST00000525602 NLRP10Q86W26 655 aa16.44■□□□□ 0.22
CLP1-202ENST00000525602 MKRN1Q9UHC7 482 aaKnown RBP16.44■□□□□ 0.22
CLP1-202ENST00000525602 LTBP3Q9NS15 1303 aa16.44■□□□□ 0.22
CLP1-202ENST00000525602 NPR1P16066 1061 aa16.43■□□□□ 0.22
CLP1-202ENST00000525602 GOLGA2Q08379 1002 aa16.43■□□□□ 0.22
CLP1-202ENST00000525602 DPY19L2Q6NUT2 758 aa16.43■□□□□ 0.22
CLP1-202ENST00000525602 CNKSR1Q969H4 720 aa16.43■□□□□ 0.22
CLP1-202ENST00000525602 UTP14AQ9BVJ6 771 aaKnown RBP16.43■□□□□ 0.22
CLP1-202ENST00000525602 MYH16Q9H6N6 1097 aa16.43■□□□□ 0.22
CLP1-202ENST00000525602 RNF123Q5XPI4 1314 aa16.43■□□□□ 0.22
CLP1-202ENST00000525602 ZNF541Q9H0D2 1346 aa16.43■□□□□ 0.22
CLP1-202ENST00000525602 EXOSC9Q06265 439 aaKnown RBP16.42■□□□□ 0.22
CLP1-202ENST00000525602 CRY2Q49AN0 593 aa16.42■□□□□ 0.22
CLP1-202ENST00000525602 STK31Q9BXU1 1019 aa16.42■□□□□ 0.22
CLP1-202ENST00000525602 SCN4AP35499 1836 aa16.42■□□□□ 0.22
CLP1-202ENST00000525602 TCERG1O14776 1098 aaKnown RBP16.41■□□□□ 0.22
CLP1-202ENST00000525602 CHADLQ6NUI6 762 aa16.41■□□□□ 0.22
CLP1-202ENST00000525602 SLC51AQ86UW1 340 aa16.41■□□□□ 0.22
CLP1-202ENST00000525602 ISCA1Q9BUE6 129 aa16.41■□□□□ 0.22
CLP1-202ENST00000525602 RIC3Q7Z5B4 369 aa16.4■□□□□ 0.22
CLP1-202ENST00000525602 C7orf43Q8WVR3 580 aa16.4■□□□□ 0.22
CLP1-202ENST00000525602 ZNF277Q9NRM2 450 aaPredicted RBP16.4■□□□□ 0.22
CLP1-202ENST00000525602 LAMB2P55268 1798 aa16.4■□□□□ 0.22
CLP1-202ENST00000525602 ADAMTSL1Q8N6G6 1762 aa16.4■□□□□ 0.22
CLP1-202ENST00000525602 COL4A5P29400 1685 aa16.4■□□□□ 0.22
CLP1-202ENST00000525602 ATP5J2-PTCD1G3V325 749 aa16.39■□□□□ 0.21
CLP1-202ENST00000525602 VAMP4O75379 141 aa16.39■□□□□ 0.21
CLP1-202ENST00000525602 SLC10A5Q5PT55 438 aa16.39■□□□□ 0.21
CLP1-202ENST00000525602 C3orf67Q6ZVT6 689 aa16.39■□□□□ 0.21
CLP1-202ENST00000525602 MIER1Q8N108 512 aa16.39■□□□□ 0.21
CLP1-202ENST00000525602 DDX60Q8IY21 1712 aaKnown RBP16.39■□□□□ 0.21
CLP1-202ENST00000525602 DDX58O95786 925 aaKnown RBP16.38■□□□□ 0.21
CLP1-202ENST00000525602 ZNF428Q96B54 188 aa16.38■□□□□ 0.21
CLP1-202ENST00000525602 CREBZFQ9NS37 354 aa16.38■□□□□ 0.21
CLP1-202ENST00000525602 TRMT112Q9UI30 125 aaKnown RBP16.38■□□□□ 0.21
CLP1-202ENST00000525602 CACNA1FO60840 1977 aa16.38■□□□□ 0.21
CLP1-202ENST00000525602 SH3TC1Q8TE82 1336 aa16.38■□□□□ 0.21
CLP1-202ENST00000525602 SLC4A2P04920 1241 aa16.38■□□□□ 0.21
CLP1-202ENST00000525602 TRIM28Q13263 835 aaKnown RBP16.38■□□□□ 0.21
CLP1-202ENST00000525602 CCDC93Q567U6 631 aa16.38■□□□□ 0.21
CLP1-202ENST00000525602 G2E3Q7L622 706 aa16.38■□□□□ 0.21
CLP1-202ENST00000525602 SYNE4Q8N205 404 aa16.38■□□□□ 0.21
CLP1-202ENST00000525602 RPGRQ92834 1020 aaKnown RBP16.38■□□□□ 0.21
CLP1-202ENST00000525602 NLRP3Q96P20 1036 aa16.38■□□□□ 0.21
CLP1-202ENST00000525602 MYD88Q99836 296 aa16.38■□□□□ 0.21
CLP1-202ENST00000525602 TAF1DQ9H5J8 278 aaPredicted RBP16.38■□□□□ 0.21
CLP1-202ENST00000525602 LTBP1Q14766 1721 aa16.37■□□□□ 0.21
CLP1-202ENST00000525602 ALDH1B1P30837 517 aa16.37■□□□□ 0.21
CLP1-202ENST00000525602 HOXA10P31260 410 aaPredicted RBP16.37■□□□□ 0.21
CLP1-202ENST00000525602 SOGA3Q5TF21 947 aa16.37■□□□□ 0.21
CLP1-202ENST00000525602 PASKQ96RG2 1323 aa16.36■□□□□ 0.21
CLP1-202ENST00000525602 CNTNAP1P78357 1384 aa16.36■□□□□ 0.21
CLP1-202ENST00000525602 SNED1Q8TER0 1413 aa16.36■□□□□ 0.21
CLP1-202ENST00000525602 E9PSI1 815 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms